RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 ERVK-24P63145 666 aa8.36□□□□□ -1.07
PBRM1-216ENST00000449505 USP17L24Q0WX57 530 aa8.36□□□□□ -1.07
PBRM1-216ENST00000449505 ABCB5Q2M3G0 1257 aa8.36□□□□□ -1.07
PBRM1-216ENST00000449505 CERKLQ49MI3 558 aaPredicted RBP8.36□□□□□ -1.07
PBRM1-216ENST00000449505 TATDN1Q6P1N9 297 aa8.36□□□□□ -1.07
PBRM1-216ENST00000449505 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.36□□□□□ -1.074e-6■■■□□ 18.8
PBRM1-216ENST00000449505 KIAA1683Q9H0B3 1180 aa8.36□□□□□ -1.07
PBRM1-216ENST00000449505 CRISPLD2Q9H0B8 497 aa8.36□□□□□ -1.07
PBRM1-216ENST00000449505 RABGAP1Q9Y3P9 1069 aa8.36□□□□□ -1.07
PBRM1-216ENST00000449505 IVNS1ABPQ9Y6Y0 642 aa8.36□□□□□ -1.07
PBRM1-216ENST00000449505 RANBP2P49792 3224 aaKnown RBP8.36□□□□□ -1.07
PBRM1-216ENST00000449505 RAB11FIP3O75154 756 aa8.35□□□□□ -1.07
PBRM1-216ENST00000449505 PRKAR2AP13861 404 aaKnown RBP8.35□□□□□ -1.07
PBRM1-216ENST00000449505 DYNLL1P63167 89 aaKnown RBP8.35□□□□□ -1.07
PBRM1-216ENST00000449505 RRP1BQ14684 758 aaKnown RBP8.35□□□□□ -1.07
PBRM1-216ENST00000449505 RAB3GAP1Q15042 981 aa8.35□□□□□ -1.07
PBRM1-216ENST00000449505 SLC9C2Q5TAH2 1124 aa8.35□□□□□ -1.07
PBRM1-216ENST00000449505 RHPN1Q8TCX5 695 aa8.35□□□□□ -1.07
PBRM1-216ENST00000449505 DNAJC2Q99543 621 aaKnown RBP8.35□□□□□ -1.07
PBRM1-216ENST00000449505 PAGR1Q9BTK6 254 aa8.35□□□□□ -1.07
PBRM1-216ENST00000449505 NBPF3Q9H094 633 aa8.35□□□□□ -1.07
PBRM1-216ENST00000449505 SWAP70Q9UH65 585 aa8.35□□□□□ -1.07
PBRM1-216ENST00000449505 MYH8P13535 1937 aa8.35□□□□□ -1.07
PBRM1-216ENST00000449505 ZNF236Q9UL36 1845 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 MSCO60682 206 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 PDE6AP16499 860 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 VCAM1P19320 739 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 CYP2B6P20813 491 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 MAP3K21Q5TCX8 1036 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 WDR78Q5VTH9 848 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 ZSCAN25Q6NSZ9 544 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 LBX2Q6XYB7 198 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 TMEM179Q6ZVK1 233 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 GPR142Q7Z601 462 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 PLEKHH3Q7Z736 793 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 MIER1Q8N108 512 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 PANK1Q8TE04 598 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 TRIB2Q92519 343 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 P2RX7Q99572 595 aaKnown RBP8.34□□□□□ -1.07
PBRM1-216ENST00000449505 RIOK1Q9BRS2 568 aaKnown RBP8.34□□□□□ -1.07
PBRM1-216ENST00000449505 IL1RAPL2Q9NP60 686 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 MCM9Q9NXL9 1143 aa8.34□□□□□ -1.07
PBRM1-216ENST00000449505 GOLIM4O00461 696 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 MPHOSPH10O00566 681 aaKnown RBP8.33□□□□□ -1.08
PBRM1-216ENST00000449505 MAP2K5Q13163 448 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 ZYXQ15942 572 aaKnown RBP8.33□□□□□ -1.08
PBRM1-216ENST00000449505 MFSD14CQ5VZR4 134 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 DOCK3Q8IZD9 2030 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 MB21D1Q8N884 522 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 LPAR1Q92633 364 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 GPATCH3Q96I76 525 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 PAWRQ96IZ0 340 aaKnown RBP8.33□□□□□ -1.08
PBRM1-216ENST00000449505 C11orf49Q9H6J7 331 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 ANTXR1Q9H6X2 564 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 ARHGEF10LQ9HCE6 1279 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 EMILIN3Q9NT22 766 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 ATP8A2Q9NTI2 1148 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 PAG1Q9NWQ8 432 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 SLC5A4Q9NY91 659 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 GJD2Q9UKL4 321 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 PLXNB2O15031 1838 aa8.33□□□□□ -1.08
PBRM1-216ENST00000449505 ZNF532Q9HCE3 1301 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 A0A0G2JMZ2 1700 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 SLC15A5A6NIM6 579 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 APBB1O00213 710 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 SHMT1P34896 483 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 CATSPERGQ6ZRH7 1159 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 C7orf61Q8IZ16 206 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 CCDC17Q96LX7 622 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 TANGO6Q9C0B7 1094 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 RPAP3Q9H6T3 665 aaPredicted RBP8.32□□□□□ -1.08
PBRM1-216ENST00000449505 TXNRD2Q9NNW7 524 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 HOXC10Q9NYD6 342 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 RBM27Q9P2N5 1060 aaKnown RBP8.32□□□□□ -1.08
PBRM1-216ENST00000449505 RBPJLQ9UBG7 517 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 OGDHLQ9ULD0 1010 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 NDUFB9Q9Y6M9 179 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 MYH7P12883 1935 aa8.32□□□□□ -1.08
PBRM1-216ENST00000449505 STRNO43815 780 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 HOXC6P09630 235 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 ATP5JP18859 108 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 COPB2P35606 906 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 JAG1P78504 1218 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 ICA1Q05084 483 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 GABPAQ06546 454 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 GRB14Q14449 540 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 LRRFIP1Q32MZ4 808 aaKnown RBP8.31□□□□□ -1.08
PBRM1-216ENST00000449505 MORN1Q5T089 497 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 SHCBP1Q8NEM2 672 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 EDC3Q96F86 508 aaKnown RBP8.31□□□□□ -1.08
PBRM1-216ENST00000449505 LRRCC1Q9C099 1032 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 PORCNQ9H237 461 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 DCP1AQ9NPI6 582 aaPredicted RBP8.31□□□□□ -1.08
PBRM1-216ENST00000449505 ZBTB40Q9NUA8 1239 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 ARPP21Q9UBL0 812 aaPredicted RBP8.31□□□□□ -1.08
PBRM1-216ENST00000449505 RCAN3Q9UKA8 241 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 COG6Q9Y2V7 657 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 FRMPD3Q5JV73 1810 aa8.31□□□□□ -1.08
PBRM1-216ENST00000449505 SPDYE16A6NNV3 312 aaPredicted RBP8.3□□□□□ -1.08
PBRM1-216ENST00000449505 WDR46O15213 610 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms