RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 PBX4Q9BYU1 374 aa8.95□□□□□ -0.98
HDLBP-222ENST00000449504 SALL1Q9NSC2 1324 aa8.95□□□□□ -0.98
HDLBP-222ENST00000449504 LOC285556D6RIA3 1793 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 FAM86C2PA6NEL3 165 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 KIAA0355O15063 1070 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 CNMDO75829 334 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 GDF11O95390 407 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 ASNSP08243 561 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 RHBDL3P58872 404 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 LRRC41Q15345 812 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 ZYXQ15942 572 aaKnown RBP8.94□□□□□ -0.98
HDLBP-222ENST00000449504 ATP2B3Q16720 1220 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 SHROOM1Q2M3G4 852 aaPredicted RBP8.94□□□□□ -0.98
HDLBP-222ENST00000449504 WWC1Q8IX03 1113 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 SLC44A5Q8NCS7 719 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 FAM163AQ96GL9 167 aaPredicted RBP8.94□□□□□ -0.98
HDLBP-222ENST00000449504 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.94□□□□□ -0.98
HDLBP-222ENST00000449504 SIL1Q9H173 461 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 EMILIN3Q9NT22 766 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 RABGAP1Q9Y3P9 1069 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 MROH7-TTC4A0A0A0MT08 1334 aa8.94□□□□□ -0.98
HDLBP-222ENST00000449504 LAMA2P24043 3122 aaKnown RBP8.94□□□□□ -0.98
HDLBP-222ENST00000449504 GPR75-ASB3A0A0A6YYF3 556 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 SEMA3EO15041 775 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 SEPT4O43236 478 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 HOXC6P09630 235 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 MECOMQ03112 1051 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 DDX10Q13206 875 aaKnown RBP8.93□□□□□ -0.98
HDLBP-222ENST00000449504 AAK1Q2M2I8 961 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 FAM47AQ5JRC9 791 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 C1orf53Q5VUE5 145 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 SPTY2D1Q68D10 685 aaPredicted RBP8.93□□□□□ -0.98
HDLBP-222ENST00000449504 USP17L2Q6R6M4 530 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 ERICH6Q7L0X2 663 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 CRACR2BQ8N4Y2 399 aaPredicted RBP8.93□□□□□ -0.98
HDLBP-222ENST00000449504 TRIM34Q9BYJ4 488 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 NKX2-4Q9H2Z4 354 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 CXXC1Q9P0U4 656 aaPredicted RBP8.93□□□□□ -0.98
HDLBP-222ENST00000449504 CEP126Q9P2H0 1117 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 HERC5Q9UII4 1024 aaKnown RBP8.93□□□□□ -0.98
HDLBP-222ENST00000449504 MSRAQ9UJ68 235 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 FANCIQ9NVI1 1328 aa8.93□□□□□ -0.98
HDLBP-222ENST00000449504 MUC3AQ02505 3323 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 USP17L15C9J2P7 530 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 USP17L13C9JLJ4 530 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 USP17L11C9JVI0 530 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 USP17L18D6R9N7 530 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 USP17L22D6RA61 530 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 USP17L17D6RBQ6 530 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 USP17L19D6RCP7 530 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 USP17L20D6RJB6 530 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 ACRP10323 421 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 ADORA1P30542 326 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 USP17L24Q0WX57 530 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 GRB14Q14449 540 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 CCDC102BQ68D86 513 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 ATG9AQ7Z3C6 839 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 TEX11Q8IYF3 940 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 FEZ1Q99689 392 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 SLC28A3Q9HAS3 691 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 BTBD7Q9P203 1132 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 PI4KBQ9UBF8 816 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 SALL2Q9Y467 1007 aaPredicted RBP8.92□□□□□ -0.98
HDLBP-222ENST00000449504 CDH23Q9H251 3354 aa8.92□□□□□ -0.98
HDLBP-222ENST00000449504 FRMPD3Q5JV73 1810 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 DCDC2CA8MYV0 355 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 APBB1O00213 710 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 PGK1P00558 417 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 LDHCP07864 332 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 ADORA2AP29274 412 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 MRE11P49959 708 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 FAAP100Q0VG06 881 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 RASGRF1Q13972 1273 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 TMEM240Q5SV17 173 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 C16orf59Q7L2K0 433 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 XPNPEP3Q9NQH7 507 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 ZBTB21Q9ULJ3 1066 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 PHF24Q9UPV7 400 aa8.91□□□□□ -0.98
HDLBP-222ENST00000449504 TCF20Q9UGU0 1960 aaKnown RBP8.9□□□□□ -0.98
HDLBP-222ENST00000449504 RLFQ13129 1914 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 IL16Q14005 1332 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 A0A1W2PQ45 241 aaPredicted RBP8.9□□□□□ -0.98
HDLBP-222ENST00000449504 A0A1W2PQY0 241 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 GPR37L1O60883 481 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 TIMP1P01033 207 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 RARBP10826 455 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 CSF2RAP15509 400 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 RFX5P48382 616 aaPredicted RBP8.9□□□□□ -0.98
HDLBP-222ENST00000449504 TIMM10P62072 90 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 GSTO1P78417 241 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 PPIGQ13427 754 aaKnown RBP eCLIP8.9□□□□□ -0.984e-34■□□□□ 8
HDLBP-222ENST00000449504 RAB30Q15771 203 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 CCDC27Q2M243 656 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 OLFML2BQ68BL8 750 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 MFSD5Q6N075 450 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 CCDC174Q6PII3 467 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 CATSPERGQ6ZRH7 1159 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 TBC1D9Q6ZT07 1266 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 ZNF365Q70YC5 407 aa8.9□□□□□ -0.98
HDLBP-222ENST00000449504 RNF180Q86T96 592 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms