RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 SMCO2A6NFE2 343 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 SLC9C1Q4G0N8 1177 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 CCDC84Q86UT8 332 aaPredicted RBP11.63□□□□□ -0.55
CTC1-202ENST00000449476 GPIHBP1Q8IV16 184 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 PNMA1Q8ND90 353 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 TDRD7Q8NHU6 1098 aaKnown RBP11.63□□□□□ -0.55
CTC1-202ENST00000449476 DDX12PQ92771 950 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 SECISBP2LQ93073 1101 aaKnown RBP11.63□□□□□ -0.55
CTC1-202ENST00000449476 UIMC1Q96RL1 719 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 PCDHA5Q9Y5H7 936 aa11.63□□□□□ -0.55
CTC1-202ENST00000449476 CARMIL3Q8ND23 1372 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 SP4Q02446 784 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 FMNL3Q8IVF7 1028 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 TBC1D22AQ8WUA7 517 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 CARD10Q9BWT7 1032 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 RCOR1Q9UKL0 485 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 PYCARDQ9ULZ3 195 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 ETF1P62495 437 aaKnown RBP11.62□□□□□ -0.55
CTC1-202ENST00000449476 RAD51AP2Q09MP3 1159 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 ARHGAP31Q2M1Z3 1444 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 C8orf74Q6P047 294 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 PI16Q6UXB8 463 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 TRIML1Q8N9V2 468 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 JDP2Q8WYK2 163 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 OSBP2Q969R2 916 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 FTOQ9C0B1 505 aaKnown RBP eCLIP11.62□□□□□ -0.55
CTC1-202ENST00000449476 ATP6V0A2Q9Y487 856 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 RNASE9P60153 205 aaKnown RBP11.62□□□□□ -0.55
CTC1-202ENST00000449476 PLCB3Q01970 1234 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 NCAPH2Q6IBW4 605 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 DPP8Q6V1X1 898 aaPredicted RBP11.62□□□□□ -0.55
CTC1-202ENST00000449476 SMAP1Q8IYB5 467 aaPredicted RBP11.62□□□□□ -0.55
CTC1-202ENST00000449476 FAM76AQ8TAV0 307 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 SH2D4AQ9H788 454 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 NRBP1Q9UHY1 535 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 M0R2C6 588 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 BACH1O14867 736 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 SCG2P13521 617 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 DESI2Q9BSY9 194 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 HOMER2Q9NSB8 354 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 TBC1D7Q9P0N9 293 aa11.62□□□□□ -0.55
CTC1-202ENST00000449476 ZNF215Q9UL58 517 aaPredicted RBP11.62□□□□□ -0.55
CTC1-202ENST00000449476 MNAT1P51948 309 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 MFSD14BQ5SR56 506 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 NELFCDQ8IXH7 590 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 ATG3Q9NT62 314 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 ERCC6L2Q5T890 1561 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 OR8K1Q8NGG5 319 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 NOX5Q96PH1 765 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 FAM207AQ9NSI2 230 aaPredicted RBP11.61□□□□□ -0.55
CTC1-202ENST00000449476 POLR3EQ9NVU0 708 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 LOC102724428A0A0B4J2F2 783 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 IL6STP40189 918 aaPredicted RBP11.61□□□□□ -0.55
CTC1-202ENST00000449476 SIK1P57059 783 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 TCP10Q12799 353 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 INF2Q27J81 1249 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 GSTA5Q7RTV2 222 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 CCDC50Q8IVM0 306 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 CCDC51Q96ER9 411 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 BIN2Q9UBW5 565 aaPredicted RBP11.61□□□□□ -0.55
CTC1-202ENST00000449476 DNM3Q9UQ16 869 aa11.61□□□□□ -0.55
CTC1-202ENST00000449476 SMIM23A6NLE4 172 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 PTGDRQ13258 359 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 ASIC2Q16515 512 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 ERCC6LQ2NKX8 1250 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 UTP14CQ5TAP6 766 aaKnown RBP11.6□□□□□ -0.55
CTC1-202ENST00000449476 PSMB7Q99436 277 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 PAIP2Q9BPZ3 127 aaKnown RBP11.6□□□□□ -0.55
CTC1-202ENST00000449476 ARHGEF10LQ9HCE6 1279 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 MTRF1LQ9UGC7 380 aaKnown RBP11.6□□□□□ -0.55
CTC1-202ENST00000449476 TNFAIP3P21580 790 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 CCDC25Q86WR0 208 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 FAM212AQ96EL1 285 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 NSRP1Q9H0G5 558 aaKnown RBP11.6□□□□□ -0.55
CTC1-202ENST00000449476 MTUS1Q9ULD2 1270 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 CALRP27797 417 aaKnown RBP11.6□□□□□ -0.55
CTC1-202ENST00000449476 ADD2P35612 726 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 GTF2IP78347 998 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 ZYXQ15942 572 aaKnown RBP11.6□□□□□ -0.55
CTC1-202ENST00000449476 DPCR1Q3MIW9 517 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 PUS7LQ9H0K6 701 aaKnown RBP11.6□□□□□ -0.55
CTC1-202ENST00000449476 STMN4Q9H169 189 aaPredicted RBP11.6□□□□□ -0.55
CTC1-202ENST00000449476 UNC13BO14795 1591 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 A0A087WWV3 80 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 KCNJ18B7U540 433 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 KLRF2D3W0D1 207 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 KIF4AO95239 1232 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 MYCNP04198 464 aaPredicted RBP11.6□□□□□ -0.55
CTC1-202ENST00000449476 KCNJ12Q14500 433 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 LINC00301Q8NCQ3 95 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 CCDC26Q8TAB7 109 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 SELENOSQ9BQE4 189 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 WDR17Q8IZU2 1322 aa11.6□□□□□ -0.55
CTC1-202ENST00000449476 CHD1O14646 1710 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 ARHGEF35A5YM69 484 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 ATP2A1O14983 1001 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 CALUO43852 315 aaPredicted RBP11.59□□□□□ -0.55
CTC1-202ENST00000449476 CALCOCO2Q13137 446 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 FERMT1Q9BQL6 677 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms