RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 SSH1Q8WYL5 1049 aa12.33□□□□□ -0.44
LINC02561-201ENST00000449457 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
LINC02561-201ENST00000449457 P2RX7Q99572 595 aaKnown RBP12.33□□□□□ -0.44
LINC02561-201ENST00000449457 FLRT1Q9NZU1 646 aa12.33□□□□□ -0.44
LINC02561-201ENST00000449457 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
LINC02561-201ENST00000449457 DENND2AQ9ULE3 1009 aa12.33□□□□□ -0.44
LINC02561-201ENST00000449457 SALL1Q9NSC2 1324 aa12.33□□□□□ -0.44
LINC02561-201ENST00000449457 COL6A1P12109 1028 aa12.32□□□□□ -0.44
LINC02561-201ENST00000449457 ZKSCAN1P17029 563 aaPredicted RBP12.32□□□□□ -0.44
LINC02561-201ENST00000449457 MAP3K10Q02779 954 aa12.32□□□□□ -0.44
LINC02561-201ENST00000449457 ZYXQ15942 572 aaKnown RBP12.32□□□□□ -0.44
LINC02561-201ENST00000449457 C9orf50Q5SZB4 431 aa12.32□□□□□ -0.44
LINC02561-201ENST00000449457 FAM9BQ8IZU0 186 aa12.32□□□□□ -0.44
LINC02561-201ENST00000449457 PROCA1Q8NCQ7 364 aaPredicted RBP12.32□□□□□ -0.44
LINC02561-201ENST00000449457 EPAS1Q99814 870 aa12.32□□□□□ -0.44
LINC02561-201ENST00000449457 DNAJC18Q9H819 358 aa12.32□□□□□ -0.44
LINC02561-201ENST00000449457 CDK5RAP2Q96SN8 1893 aa12.31□□□□□ -0.44
LINC02561-201ENST00000449457 IRX3P78415 501 aaPredicted RBP12.31□□□□□ -0.44
LINC02561-201ENST00000449457 GPR153Q6NV75 609 aa12.31□□□□□ -0.44
LINC02561-201ENST00000449457 SH3RF3Q8TEJ3 882 aaPredicted RBP12.31□□□□□ -0.44
LINC02561-201ENST00000449457 SENP6Q9GZR1 1112 aaPredicted RBP12.31□□□□□ -0.44
LINC02561-201ENST00000449457 OSBPL5Q9H0X9 879 aaPredicted RBP12.31□□□□□ -0.44
LINC02561-201ENST00000449457 GNL3LQ9NVN8 582 aaKnown RBP12.31□□□□□ -0.44
LINC02561-201ENST00000449457 CEP126Q9P2H0 1117 aa12.31□□□□□ -0.44
LINC02561-201ENST00000449457 MYO5AQ9Y4I1 1855 aaKnown RBP12.3□□□□□ -0.44
LINC02561-201ENST00000449457 FECHP22830 423 aa12.3□□□□□ -0.44
LINC02561-201ENST00000449457 CAP2P40123 477 aa12.3□□□□□ -0.44
LINC02561-201ENST00000449457 GCLCP48506 637 aaPredicted RBP12.3□□□□□ -0.44
LINC02561-201ENST00000449457 HERVK_113P62684 666 aa12.3□□□□□ -0.44
LINC02561-201ENST00000449457 WDR78Q5VTH9 848 aa12.3□□□□□ -0.44
LINC02561-201ENST00000449457 CDX2Q99626 313 aaPredicted RBP12.3□□□□□ -0.44
LINC02561-201ENST00000449457 NUDT12Q9BQG2 462 aa12.3□□□□□ -0.44
LINC02561-201ENST00000449457 MORF4L1Q9UBU8 362 aa12.3□□□□□ -0.44
LINC02561-201ENST00000449457 SAP30BPQ9UHR5 308 aaKnown RBP12.3□□□□□ -0.44
LINC02561-201ENST00000449457 A0A1B0GUL7 405 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 USP17L5A8MUK1 530 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 MAP3K7O43318 606 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 TFCP2Q12800 502 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 SHHQ15465 462 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 ZNF697Q5TEC3 545 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 ERICH6Q7L0X2 663 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 GPR142Q7Z601 462 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 MAPKAPK5Q8IW41 473 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 TEX11Q8IYF3 940 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 ZNF710Q8N1W2 664 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 USP38Q8NB14 1042 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 TRPV1Q8NER1 839 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 MAFAQ8NHW3 353 aaPredicted RBP12.29□□□□□ -0.44
LINC02561-201ENST00000449457 XAGE2Q96GT9 111 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 TTYH1Q9H313 450 aaPredicted RBP12.29□□□□□ -0.44
LINC02561-201ENST00000449457 CDHR5Q9HBB8 845 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 PRDM5Q9NQX1 630 aaPredicted RBP12.29□□□□□ -0.44
LINC02561-201ENST00000449457 RBPJLQ9UBG7 517 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 ATP11BQ9Y2G3 1177 aa12.29□□□□□ -0.44
LINC02561-201ENST00000449457 GPR75-ASB3A0A0A6YYF3 556 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 CNMDO75829 334 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 UBTFL1P0CB47 393 aaPredicted RBP12.28□□□□□ -0.44
LINC02561-201ENST00000449457 CNGA1P29973 690 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 RTP1P59025 263 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 ERVK-9P63128 1117 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 ERVK-24P63145 666 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 PTGDRQ13258 359 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 TYW1BQ6NUM6 668 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 ADGRA1Q86SQ6 560 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 USP6NLQ92738 828 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 MEIS3Q99687 375 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 PRDM6Q9NQX0 595 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 SNRKQ9NRH2 765 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 AATFQ9NY61 560 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC02561-201ENST00000449457 HMG20BQ9P0W2 317 aa12.28□□□□□ -0.44
LINC02561-201ENST00000449457 CIAO1O76071 339 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 CYP2C19P33261 490 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 FOSBP53539 338 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 PDE3AQ14432 1141 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 HIC1Q14526 733 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 SH3D19Q5HYK7 790 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 MORN1Q5T089 497 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 GJC2Q5T442 439 aaPredicted RBP12.27□□□□□ -0.45
LINC02561-201ENST00000449457 SH3RF1Q7Z6J0 888 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 GPRC5AQ8NFJ5 357 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 NPLOC4Q8TAT6 608 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 SOCS4Q8WXH5 440 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 NSUN4Q96CB9 384 aaKnown RBP12.27□□□□□ -0.45
LINC02561-201ENST00000449457 APBA2Q99767 749 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 LBHD1Q9BQE6 289 aaPredicted RBP12.27□□□□□ -0.45
LINC02561-201ENST00000449457 ZSWIM6Q9HCJ5 1215 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 TMOD4Q9NZQ9 345 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 RAI14Q9P0K7 980 aa12.27□□□□□ -0.45
LINC02561-201ENST00000449457 MCAMP43121 646 aa12.26□□□□□ -0.45
LINC02561-201ENST00000449457 BACE1P56817 501 aa12.26□□□□□ -0.45
LINC02561-201ENST00000449457 PABPC4Q13310 644 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC02561-201ENST00000449457 TSR1Q2NL82 804 aaKnown RBP12.26□□□□□ -0.45
LINC02561-201ENST00000449457 PLEKHH3Q7Z736 793 aa12.26□□□□□ -0.45
LINC02561-201ENST00000449457 ZGPATQ8N5A5 531 aaKnown RBP12.26□□□□□ -0.45
LINC02561-201ENST00000449457 TGFBRAP1Q8WUH2 860 aa12.26□□□□□ -0.45
LINC02561-201ENST00000449457 NEUROD6Q96NK8 337 aa12.26□□□□□ -0.45
LINC02561-201ENST00000449457 CWC22Q9HCG8 908 aaKnown RBP12.26□□□□□ -0.45
LINC02561-201ENST00000449457 PALD1Q9ULE6 856 aa12.26□□□□□ -0.45
LINC02561-201ENST00000449457 TNNQ9UQP3 1299 aa12.26□□□□□ -0.45
LINC02561-201ENST00000449457 RLFQ13129 1914 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms