RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 IMMTQ16891 758 aaKnown RBP12.62□□□□□ -0.39
SMPD4-211ENST00000449159 FAM47AQ5JRC9 791 aa12.62□□□□□ -0.39
SMPD4-211ENST00000449159 PRPF38BQ5VTL8 546 aaKnown RBP12.62□□□□□ -0.39
SMPD4-211ENST00000449159 KIAA1211Q6ZU35 1233 aa12.62□□□□□ -0.39
SMPD4-211ENST00000449159 TMEM179Q6ZVK1 233 aa12.62□□□□□ -0.39
SMPD4-211ENST00000449159 ZNF280CQ8ND82 737 aa12.62□□□□□ -0.39
SMPD4-211ENST00000449159 BRI3BPQ8WY22 251 aa12.62□□□□□ -0.39
SMPD4-211ENST00000449159 RBM8AQ9Y5S9 174 aaKnown RBP12.62□□□□□ -0.39
SMPD4-211ENST00000449159 BRCA2P51587 3418 aa12.62□□□□□ -0.39
SMPD4-211ENST00000449159 MKI67P46013 3256 aaKnown RBP12.62□□□□□ -0.39
SMPD4-211ENST00000449159 PLIN4Q96Q06 1357 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 CCL15-CCL14A0A0B4J2E2 113 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 MANSC4A6NHS7 340 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-211ENST00000449159 IGF2BP3O00425 579 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMPD4-211ENST00000449159 ORC4O43929 436 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 CYP21A2P08686 494 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 FGRP09769 529 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 SNAPC2Q13487 334 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 MTMR2Q13614 643 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 MOGSQ13724 837 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 CCL15Q16663 113 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 RRP12Q5JTH9 1297 aaKnown RBP12.61□□□□□ -0.39
SMPD4-211ENST00000449159 AKNAD1Q5T1N1 836 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 ZNF296Q8WUU4 475 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-211ENST00000449159 STAG1Q8WVM7 1258 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 CCDC17Q96LX7 622 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 PTPN18Q99952 460 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 CABP5Q9NP86 173 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 TOMM22Q9NS69 142 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 GINM1Q9NU53 330 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 CTNNA3Q9UI47 895 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 HPS5Q9UPZ3 1129 aa12.61□□□□□ -0.39
SMPD4-211ENST00000449159 U3KPZ7 1027 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-211ENST00000449159 IGKV6D-41A0A0C4DH26 115 aa12.6□□□□□ -0.39
SMPD4-211ENST00000449159 A0A0G2JLL6 359 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-211ENST00000449159 A0A1W2PRG0 241 aa12.6□□□□□ -0.39
SMPD4-211ENST00000449159 GTF2A2P52657 109 aa12.6□□□□□ -0.39
SMPD4-211ENST00000449159 HMGCS2P54868 508 aa12.6□□□□□ -0.39
SMPD4-211ENST00000449159 SREBF2Q12772 1141 aa12.6□□□□□ -0.39
SMPD4-211ENST00000449159 ZYXQ15942 572 aaKnown RBP12.6□□□□□ -0.39
SMPD4-211ENST00000449159 MFSD6Q6ZSS7 791 aa12.6□□□□□ -0.39
SMPD4-211ENST00000449159 STOX1Q6ZVD7 989 aa12.6□□□□□ -0.39
SMPD4-211ENST00000449159 PRRT2Q7Z6L0 340 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-211ENST00000449159 SIAH1Q8IUQ4 282 aa12.6□□□□□ -0.39
SMPD4-211ENST00000449159 ZNF444Q8N0Y2 327 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-211ENST00000449159 WDR18Q9BV38 432 aa12.6□□□□□ -0.39
SMPD4-211ENST00000449159 AS3MTQ9HBK9 375 aa12.6□□□□□ -0.39
SMPD4-211ENST00000449159 ZNF287Q9HBT7 754 aa12.6□□□□□ -0.39
SMPD4-211ENST00000449159 TESPA1A2RU30 521 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-211ENST00000449159 CXCL11O14625 94 aa12.59□□□□□ -0.39
SMPD4-211ENST00000449159 RANBP6O60518 1105 aaKnown RBP12.59□□□□□ -0.39
SMPD4-211ENST00000449159 NMT2O60551 498 aa12.59□□□□□ -0.39
SMPD4-211ENST00000449159 TSPY3P0CV98 308 aa12.59□□□□□ -0.39
SMPD4-211ENST00000449159 TSPY8P0CW00 308 aa12.59□□□□□ -0.39
SMPD4-211ENST00000449159 TM4SF4P48230 202 aa12.59□□□□□ -0.39
SMPD4-211ENST00000449159 TFAP4Q01664 338 aa12.59□□□□□ -0.39
SMPD4-211ENST00000449159 ICA1Q05084 483 aa12.59□□□□□ -0.39
SMPD4-211ENST00000449159 NOM1Q5C9Z4 860 aaKnown RBP12.59□□□□□ -0.39
SMPD4-211ENST00000449159 FAM43AQ8N2R8 423 aa12.59□□□□□ -0.39
SMPD4-211ENST00000449159 NEDD1Q8NHV4 660 aa12.59□□□□□ -0.39
SMPD4-211ENST00000449159 CEP95Q96GE4 821 aa12.59□□□□□ -0.39
SMPD4-211ENST00000449159 PARP14Q460N5 1801 aa12.59□□□□□ -0.39
SMPD4-211ENST00000449159 TSPY2A6NKD2 308 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 B4E1Z4 1266 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 BTBD19C9JJ37 291 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 USP17L10C9JJH3 530 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 SLC27A2O14975 620 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 TBC1D8O95759 1140 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 CETPP11597 493 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 EEF2P13639 858 aaKnown RBP12.58□□□□□ -0.4
SMPD4-211ENST00000449159 BACE1P56817 501 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 ATP2B2Q01814 1243 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 COL9A3Q14050 684 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-211ENST00000449159 NECTIN1Q15223 517 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 KIAA1755Q5JYT7 1200 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 TREML2Q5T2D2 321 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 CREB3L3Q68CJ9 461 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 GADL1Q6ZQY3 521 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 IFNL1Q8IU54 200 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 FEZ1Q99689 392 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 TBC1D2Q9BYX2 928 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 RNF41Q9H4P4 317 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-211ENST00000449159 KANSL2Q9H9L4 492 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 IL17RBQ9NRM6 502 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 EMILIN3Q9NT22 766 aa12.58□□□□□ -0.4
SMPD4-211ENST00000449159 RLFQ13129 1914 aa12.57□□□□□ -0.4
SMPD4-211ENST00000449159 E7EWF7 191 aa12.57□□□□□ -0.4
SMPD4-211ENST00000449159 KDM4AO75164 1064 aa12.57□□□□□ -0.4
SMPD4-211ENST00000449159 PCP11498 1178 aaKnown RBP12.57□□□□□ -0.4
SMPD4-211ENST00000449159 GPAT2Q6NUI2 795 aa12.57□□□□□ -0.4
SMPD4-211ENST00000449159 FBXO46Q6PJ61 603 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-211ENST00000449159 CFHR5Q9BXR6 569 aa12.57□□□□□ -0.4
SMPD4-211ENST00000449159 MTMR4Q9NYA4 1195 aa12.57□□□□□ -0.4
SMPD4-211ENST00000449159 GPR25O00155 361 aa12.56□□□□□ -0.4
SMPD4-211ENST00000449159 REC8O95072 547 aa12.56□□□□□ -0.4
SMPD4-211ENST00000449159 SEC24BO95487 1268 aa12.56□□□□□ -0.4
SMPD4-211ENST00000449159 INHBEP58166 350 aa12.56□□□□□ -0.4
SMPD4-211ENST00000449159 C8orf34Q49A92 452 aa12.56□□□□□ -0.4
SMPD4-211ENST00000449159 SH3D19Q5HYK7 790 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms