RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	TBC1D9B	Q66K14	1250 aa		19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	GRAMD1C	Q8IYS0	662 aa		19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	TNFRSF25	Q93038	417 aa		19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	CGN	Q9P2M7	1197 aa	Known RBP	19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	USP17L12	C9JPN9	530 aa		19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	USP17L21	D6R901	530 aa		19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	TOP1	P11387	765 aa	Known RBP	19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	KLRK1	P26718	216 aa		19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	NPY5R	Q15761	445 aa		19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	TMTC3	Q6ZXV5	915 aa		19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	SMAP1	Q8IYB5	467 aa	Predicted RBP	19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	ERO1A	Q96HE7	468 aa		19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	L2HGDH	Q9H9P8	463 aa		19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	CCDC88A	Q3V6T2	1871 aa		19.36	■□□□□ 0.69
TOM1-210	ENST00000449058	CCP110	O43303	1012 aa		19.35	■□□□□ 0.69
TOM1-210	ENST00000449058	MECOM	Q03112	1051 aa		19.35	■□□□□ 0.69
TOM1-210	ENST00000449058	TBX2	Q13207	712 aa	Predicted RBP	19.35	■□□□□ 0.69
TOM1-210	ENST00000449058	PDILT	Q8N807	584 aa		19.35	■□□□□ 0.69
TOM1-210	ENST00000449058	NFE2L3	Q9Y4A8	694 aa		19.35	■□□□□ 0.69
TOM1-210	ENST00000449058	BMP15	O95972	392 aa		19.35	■□□□□ 0.69
TOM1-210	ENST00000449058	RPS8	P62241	208 aa	Known RBP	19.35	■□□□□ 0.69
TOM1-210	ENST00000449058	MED15	Q96RN5	788 aa		19.35	■□□□□ 0.69
TOM1-210	ENST00000449058	hCG_1642624	A0A1W2PR95	340 aa		19.34	■□□□□ 0.69
TOM1-210	ENST00000449058	ZNF827	Q17R98	1081 aa		19.34	■□□□□ 0.69
TOM1-210	ENST00000449058	BICDL1	Q6ZP65	573 aa		19.34	■□□□□ 0.69
TOM1-210	ENST00000449058	FERMT2	Q96AC1	680 aa		19.34	■□□□□ 0.69
TOM1-210	ENST00000449058	CNTNAP5	Q8WYK1	1306 aa		19.34	■□□□□ 0.69
TOM1-210	ENST00000449058		A0A087X0B3	334 aa		19.34	■□□□□ 0.69
TOM1-210	ENST00000449058	SLU7	O95391	586 aa	Known RBP	19.34	■□□□□ 0.69
TOM1-210	ENST00000449058	GTF2E1	P29083	439 aa	Predicted RBP	19.34	■□□□□ 0.69
TOM1-210	ENST00000449058	SH3RF1	Q7Z6J0	888 aa		19.34	■□□□□ 0.69
TOM1-210	ENST00000449058	FCHSD1	Q86WN1	690 aa		19.34	■□□□□ 0.69
TOM1-210	ENST00000449058	TMEM139	Q8IV31	216 aa		19.34	■□□□□ 0.69
TOM1-210	ENST00000449058	FEZ1	Q99689	392 aa		19.34	■□□□□ 0.69
TOM1-210	ENST00000449058	DCP1A	Q9NPI6	582 aa	Predicted RBP	19.34	■□□□□ 0.69
TOM1-210	ENST00000449058	SLFN14	P0C7P3	912 aa		19.33	■□□□□ 0.69
TOM1-210	ENST00000449058	ERCC5	P28715	1186 aa	Predicted RBP	19.33	■□□□□ 0.69
TOM1-210	ENST00000449058	PLCD1	P51178	756 aa		19.33	■□□□□ 0.69
TOM1-210	ENST00000449058	CT47A1	Q5JQC4	288 aa	Predicted RBP	19.33	■□□□□ 0.69
TOM1-210	ENST00000449058	SYT10	Q6XYQ8	523 aa		19.33	■□□□□ 0.69
TOM1-210	ENST00000449058	CRNKL1	Q9BZJ0	848 aa	Known RBP	19.33	■□□□□ 0.69
TOM1-210	ENST00000449058	NYX	Q9GZU5	481 aa		19.33	■□□□□ 0.69
TOM1-210	ENST00000449058	ATP8A2	Q9NTI2	1148 aa		19.33	■□□□□ 0.69
TOM1-210	ENST00000449058	WNT7A	O00755	349 aa		19.33	■□□□□ 0.68
TOM1-210	ENST00000449058	EVX2	Q03828	476 aa		19.33	■□□□□ 0.68
TOM1-210	ENST00000449058	CCDC93	Q567U6	631 aa		19.33	■□□□□ 0.68
TOM1-210	ENST00000449058	TMED8	Q6PL24	325 aa	Predicted RBP	19.33	■□□□□ 0.68
TOM1-210	ENST00000449058	EPSTI1	Q96J88	318 aa		19.33	■□□□□ 0.68
TOM1-210	ENST00000449058	ANKRD2	Q9GZV1	360 aa		19.33	■□□□□ 0.68
TOM1-210	ENST00000449058	BRMS1	Q9HCU9	246 aa		19.33	■□□□□ 0.68
TOM1-210	ENST00000449058	ZBTB22	O15209	634 aa		19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	HIBADH	P31937	336 aa	Known RBP	19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	KCNQ4	P56696	695 aa		19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	ETF1	P62495	437 aa	Known RBP	19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	SBK1	Q52WX2	424 aa		19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	NUTM2A	Q8IVF1	878 aa	Predicted RBP	19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	SRBD1	Q8N5C6	995 aa	Known RBP	19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	NARF	Q9UHQ1	456 aa		19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	NUTM2B	A6NNL0	878 aa	Predicted RBP	19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	NUTM2E	B1AL46	878 aa	Predicted RBP	19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	CBX1	P83916	185 aa		19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	TRMT44	Q8IYL2	757 aa	Known RBP	19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	DHX58	Q96C10	678 aa		19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	CCDC34	Q96HJ3	373 aa		19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	NLRP3	Q96P20	1036 aa		19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	ZMYND15	Q9H091	742 aa		19.32	■□□□□ 0.68
TOM1-210	ENST00000449058	PTPN21	Q16825	1174 aa		19.31	■□□□□ 0.68
TOM1-210	ENST00000449058	CTCFL	Q8NI51	663 aa	Predicted RBP	19.31	■□□□□ 0.68
TOM1-210	ENST00000449058	SYMPK	Q92797	1274 aa	Known RBP	19.31	■□□□□ 0.68
TOM1-210	ENST00000449058	ARPP21	Q9UBL0	812 aa	Predicted RBP	19.31	■□□□□ 0.68
TOM1-210	ENST00000449058	NMT2	O60551	498 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	GOLGA8F	Q08AF8	430 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	GOLGA8DP	Q0D2H9	430 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	HSP90AA4P	Q58FG1	418 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	NOM1	Q5C9Z4	860 aa	Known RBP	19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	TTC38	Q5R3I4	469 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	RC3H1	Q5TC82	1133 aa	Known RBP	19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	SPECC1L	Q69YQ0	1117 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	SMIM5	Q71RC9	77 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	REXO1L1P	Q8IX06	675 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	PAGE5	Q96GU1	130 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	TFCP2L1	Q9NZI6	479 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	PHLPP2	Q6ZVD8	1323 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	ARHGAP6	O43182	974 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	CDK11B	P21127	795 aa	Known RBP	19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	PRDX5	P30044	214 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	ATP2C1	P98194	919 aa	Predicted RBP	19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	TRIM65	Q6PJ69	517 aa		19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	SAMSN1	Q9NSI8	373 aa	Known RBP	19.3	■□□□□ 0.68
TOM1-210	ENST00000449058	IRS2	Q9Y4H2	1338 aa		19.29	■□□□□ 0.68
TOM1-210	ENST00000449058	SETDB2	Q96T68	719 aa		19.29	■□□□□ 0.68
TOM1-210	ENST00000449058	RPS6KA4	O75676	772 aa		19.29	■□□□□ 0.68
TOM1-210	ENST00000449058	CYP2D6	P10635	497 aa		19.29	■□□□□ 0.68
TOM1-210	ENST00000449058	SCG2	P13521	617 aa		19.29	■□□□□ 0.68
TOM1-210	ENST00000449058	DPYD	Q12882	1025 aa		19.29	■□□□□ 0.68
TOM1-210	ENST00000449058	CUL4B	Q13620	913 aa		19.29	■□□□□ 0.68
TOM1-210	ENST00000449058	NR1I3	Q14994	352 aa		19.29	■□□□□ 0.68
TOM1-210	ENST00000449058	ZNF174	Q15697	407 aa		19.29	■□□□□ 0.68
TOM1-210	ENST00000449058	FAM47A	Q5JRC9	791 aa		19.29	■□□□□ 0.68
TOM1-210	ENST00000449058	TC2N	Q8N9U0	490 aa		19.29	■□□□□ 0.68

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