RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 LCORLQ8N3X6 602 aa34.28■■■■□ 3.08
CBX4-202ENST00000448310 DIS3LQ8TF46 1054 aaKnown RBP34.28■■■■□ 3.08
CBX4-202ENST00000448310 SDR42E1Q8WUS8 393 aa34.28■■■■□ 3.08
CBX4-202ENST00000448310 NUDT12Q9BQG2 462 aa34.28■■■■□ 3.08
CBX4-202ENST00000448310 MCM9Q9NXL9 1143 aa34.28■■■■□ 3.08
CBX4-202ENST00000448310 RCAN3Q9UKA8 241 aa34.28■■■■□ 3.08
CBX4-202ENST00000448310 RAB11FIP3O75154 756 aa34.27■■■■□ 3.08
CBX4-202ENST00000448310 PAWRQ96IZ0 340 aaKnown RBP34.27■■■■□ 3.08
CBX4-202ENST00000448310 HMX1Q9NP08 348 aaPredicted RBP34.27■■■■□ 3.08
CBX4-202ENST00000448310 CABP5Q9NP86 173 aa34.27■■■■□ 3.08
CBX4-202ENST00000448310 RPTORQ8N122 1335 aa34.27■■■■□ 3.08
CBX4-202ENST00000448310 MYH8P13535 1937 aa34.26■■■■□ 3.08
CBX4-202ENST00000448310 MAPK4P31152 587 aa34.26■■■■□ 3.08
CBX4-202ENST00000448310 SLFNL1Q499Z3 407 aa34.26■■■■□ 3.08
CBX4-202ENST00000448310 CCAR1Q8IX12 1150 aaKnown RBP34.26■■■■□ 3.08
CBX4-202ENST00000448310 GTF3C2Q8WUA4 911 aaPredicted RBP34.26■■■■□ 3.08
CBX4-202ENST00000448310 SOCS4Q8WXH5 440 aa34.26■■■■□ 3.08
CBX4-202ENST00000448310 KIAA1683Q9H0B3 1180 aa34.26■■■■□ 3.08
CBX4-202ENST00000448310 BOLA2Q9H3K6 86 aa34.26■■■■□ 3.08
CBX4-202ENST00000448310 NR2E3Q9Y5X4 410 aa34.26■■■■□ 3.08
CBX4-202ENST00000448310 USP17L15C9J2P7 530 aa34.25■■■■□ 3.07
CBX4-202ENST00000448310 USP17L13C9JLJ4 530 aa34.25■■■■□ 3.07
CBX4-202ENST00000448310 USP17L11C9JVI0 530 aa34.25■■■■□ 3.07
CBX4-202ENST00000448310 USP17L18D6R9N7 530 aa34.25■■■■□ 3.07
CBX4-202ENST00000448310 USP17L22D6RA61 530 aa34.25■■■■□ 3.07
CBX4-202ENST00000448310 USP17L17D6RBQ6 530 aa34.25■■■■□ 3.07
CBX4-202ENST00000448310 USP17L19D6RCP7 530 aa34.25■■■■□ 3.07
CBX4-202ENST00000448310 USP17L20D6RJB6 530 aa34.25■■■■□ 3.07
CBX4-202ENST00000448310 GUCY1A2P33402 732 aa34.25■■■■□ 3.07
CBX4-202ENST00000448310 GABPAQ06546 454 aa34.25■■■■□ 3.07
CBX4-202ENST00000448310 USP17L24Q0WX57 530 aa34.25■■■■□ 3.07
CBX4-202ENST00000448310 GPR142Q7Z601 462 aa34.25■■■■□ 3.07
CBX4-202ENST00000448310 BAZ2AQ9UIF9 1905 aaKnown RBP34.25■■■■□ 3.07
CBX4-202ENST00000448310 MYH7P12883 1935 aa34.24■■■■□ 3.07
CBX4-202ENST00000448310 CYP2D6P10635 497 aa34.24■■■■□ 3.07
CBX4-202ENST00000448310 CAPN2P17655 700 aa34.24■■■■□ 3.07
CBX4-202ENST00000448310 VCAM1P19320 739 aa34.24■■■■□ 3.07
CBX4-202ENST00000448310 USP14P54578 494 aa34.24■■■■□ 3.07
CBX4-202ENST00000448310 PDE3AQ14432 1141 aa34.24■■■■□ 3.07
CBX4-202ENST00000448310 SEPT2Q15019 361 aa34.24■■■■□ 3.07
CBX4-202ENST00000448310 ARMT1Q9H993 441 aa34.24■■■■□ 3.07
CBX4-202ENST00000448310 PAG1Q9NWQ8 432 aa34.24■■■■□ 3.07
CBX4-202ENST00000448310 RBM27Q9P2N5 1060 aaKnown RBP34.24■■■■□ 3.07
CBX4-202ENST00000448310 CNMDO75829 334 aa34.23■■■■□ 3.07
CBX4-202ENST00000448310 C20orf194Q5TEA3 1177 aa34.23■■■■□ 3.07
CBX4-202ENST00000448310 CATSPERGQ6ZRH7 1159 aa34.23■■■■□ 3.07
CBX4-202ENST00000448310 DCP1AQ9NPI6 582 aaPredicted RBP34.23■■■■□ 3.07
CBX4-202ENST00000448310 EVI5O60447 810 aa34.22■■■■□ 3.07
CBX4-202ENST00000448310 PRKAR2AP13861 404 aaKnown RBP34.22■■■■□ 3.07
CBX4-202ENST00000448310 PLEKHH3Q7Z736 793 aa34.22■■■■□ 3.07
CBX4-202ENST00000448310 MPHOSPH10O00566 681 aaKnown RBP34.21■■■■□ 3.07
CBX4-202ENST00000448310 XRCC5P13010 732 aaKnown RBP34.21■■■■□ 3.07
CBX4-202ENST00000448310 NECAB2Q7Z6G3 386 aa34.21■■■■□ 3.07
CBX4-202ENST00000448310 SLC44A5Q8NCS7 719 aa34.21■■■■□ 3.07
CBX4-202ENST00000448310 USP6NLQ92738 828 aa34.21■■■■□ 3.07
CBX4-202ENST00000448310 RABGAP1Q9Y3P9 1069 aa34.21■■■■□ 3.07
CBX4-202ENST00000448310 RANBP2P49792 3224 aaKnown RBP34.2■■■■□ 3.07
CBX4-202ENST00000448310 PRKAB2O43741 272 aa34.2■■■■□ 3.07
CBX4-202ENST00000448310 ZKSCAN1P17029 563 aaPredicted RBP34.2■■■■□ 3.07
CBX4-202ENST00000448310 CCL14Q16627 93 aa34.2■■■■□ 3.07
CBX4-202ENST00000448310 MORN1Q5T089 497 aa34.2■■■■□ 3.07
CBX4-202ENST00000448310 MAP3K21Q5TCX8 1036 aa34.2■■■■□ 3.07
CBX4-202ENST00000448310 CHMP4BQ9H444 224 aaKnown RBP34.2■■■■□ 3.07
CBX4-202ENST00000448310 RPAP3Q9H6T3 665 aaPredicted RBP34.2■■■■□ 3.07
CBX4-202ENST00000448310 CWC22Q9HCG8 908 aaKnown RBP34.2■■■■□ 3.07
CBX4-202ENST00000448310 CHGBP05060 677 aa34.19■■■■□ 3.06
CBX4-202ENST00000448310 ATP5JP18859 108 aa34.19■■■■□ 3.06
CBX4-202ENST00000448310 ADD2P35612 726 aa34.19■■■■□ 3.06
CBX4-202ENST00000448310 RGS2P41220 211 aa34.19■■■■□ 3.06
CBX4-202ENST00000448310 MBD4O95243 580 aa34.18■■■■□ 3.06
CBX4-202ENST00000448310 ANKLE1Q8NAG6 615 aa34.18■■■■□ 3.06
CBX4-202ENST00000448310 DYNLL2Q96FJ2 89 aa34.18■■■■□ 3.06
CBX4-202ENST00000448310 A0A1W2PRG0 241 aa34.17■■■■□ 3.06
CBX4-202ENST00000448310 MNX1P50219 401 aaPredicted RBP34.17■■■■□ 3.06
CBX4-202ENST00000448310 WDR78Q5VTH9 848 aa34.17■■■■□ 3.06
CBX4-202ENST00000448310 HAUS7Q99871 368 aa34.17■■■■□ 3.06
CBX4-202ENST00000448310 BTBD7Q9P203 1132 aa34.17■■■■□ 3.06
CBX4-202ENST00000448310 SMARCA5O60264 1052 aaPredicted RBP34.16■■■■□ 3.06
CBX4-202ENST00000448310 CACNB2Q08289 660 aaPredicted RBP34.16■■■■□ 3.06
CBX4-202ENST00000448310 APBA2Q99767 749 aa34.16■■■■□ 3.06
CBX4-202ENST00000448310 PRO3102Q9H379 93 aa34.16■■■■□ 3.06
CBX4-202ENST00000448310 SPDYE16A6NNV3 312 aaPredicted RBP34.15■■■■□ 3.06
CBX4-202ENST00000448310 CCNA1P78396 465 aa34.15■■■■□ 3.06
CBX4-202ENST00000448310 TRMT44Q8IYL2 757 aaKnown RBP34.15■■■■□ 3.06
CBX4-202ENST00000448310 OGDHLQ9ULD0 1010 aa34.15■■■■□ 3.06
CBX4-202ENST00000448310 SMIM22K7EJ46 135 aa34.14■■■■□ 3.06
CBX4-202ENST00000448310 MAP2K5Q13163 448 aa34.14■■■■□ 3.06
CBX4-202ENST00000448310 DDX24Q9GZR7 859 aaKnown RBP eCLIP34.14■■■■□ 3.06
CBX4-202ENST00000448310 RLFQ13129 1914 aa34.14■■■■□ 3.06
CBX4-202ENST00000448310 CYP2D7A0A087X1C5 515 aa34.13■■■■□ 3.05
CBX4-202ENST00000448310 CCND3P30281 292 aaPredicted RBP34.13■■■■□ 3.05
CBX4-202ENST00000448310 LBX2Q6XYB7 198 aa34.13■■■■□ 3.05
CBX4-202ENST00000448310 CLEC10AQ8IUN9 316 aa34.13■■■■□ 3.05
CBX4-202ENST00000448310 LRRCC1Q9C099 1032 aa34.13■■■■□ 3.05
CBX4-202ENST00000448310 NBPF3Q9H094 633 aa34.13■■■■□ 3.05
CBX4-202ENST00000448310 FRMPD3Q5JV73 1810 aa34.12■■■■□ 3.05
CBX4-202ENST00000448310 SWAP70Q9UH65 585 aa34.12■■■■□ 3.05
CBX4-202ENST00000448310 SZT2Q5T011 3432 aa34.11■■■■□ 3.05
CBX4-202ENST00000448310 AKR1B1P15121 316 aa34.11■■■■□ 3.05
CBX4-202ENST00000448310 KIAA1755Q5JYT7 1200 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms