RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 EDARADDQ8WWZ3 215 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 CLUHP3Q96NS8 147 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 MRPL4Q9BYD3 311 aaKnown RBP4.95□□□□□ -1.62
PMS1-216ENST00000447734 PBX4Q9BYU1 374 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 MAF1Q9H063 256 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 ZNF700Q9H0M5 742 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 CDH19Q9H159 772 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 RASSF4Q9H2L5 321 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 RRAGCQ9HB90 399 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 CHST12Q9NRB3 414 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 GNL3LQ9NVN8 582 aaKnown RBP4.95□□□□□ -1.62
PMS1-216ENST00000447734 GOLGA6AQ9NYA3 693 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 GMIPQ9P107 970 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 PNMA2Q9UL42 364 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 LTBP3Q9NS15 1303 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 TRBV23-1A0A0A0MS06 115 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 TRAV20A0A0B4J274 112 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 DCDC2BA2VCK2 349 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 FAM86C2PA6NEL3 165 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 ATXN7O15265 892 aaPredicted RBP4.94□□□□□ -1.62
PMS1-216ENST00000447734 EFSO43281 561 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 FOSP01100 380 aaPredicted RBP4.94□□□□□ -1.62
PMS1-216ENST00000447734 ACRP10323 421 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 NME1P15531 152 aaKnown RBP4.94□□□□□ -1.62
PMS1-216ENST00000447734 SDSP20132 328 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 NRLP54845 237 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 GNPTABQ3T906 1256 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 SV2CQ496J9 727 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 RNF219Q5W0B1 726 aaPredicted RBP4.94□□□□□ -1.62
PMS1-216ENST00000447734 INTS3Q68E01 1043 aaKnown RBP4.94□□□□□ -1.62
PMS1-216ENST00000447734 SCARA3Q6AZY7 606 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 FIGNL1Q6PIW4 674 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 PASD1Q8IV76 773 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 TCEAL8Q8IYN2 117 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 BSNDQ8WZ55 320 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 BHMTQ93088 406 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 CHMP4CQ96CF2 233 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 HOOK2Q96ED9 719 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 ARPC5LQ9BPX5 153 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 EFCC1Q9HA90 598 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 SFMBT1Q9UHJ3 866 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 HCN2Q9UL51 889 aa4.94□□□□□ -1.62
PMS1-216ENST00000447734 NOB1Q9ULX3 412 aaKnown RBP4.94□□□□□ -1.62
PMS1-216ENST00000447734 NSFL1CQ9UNZ2 370 aaKnown RBP4.94□□□□□ -1.62
PMS1-216ENST00000447734 PHLDB1Q86UU1 1377 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 A0A1W2PQU0 124 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 GPR39O43194 453 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 GHRHP01286 108 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 NAT2P11245 290 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 CDC27P30260 824 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 DGKGP49619 791 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 ATP11AP98196 1134 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 CTBSQ01459 385 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 ZNF252P-AS1Q0IIN9 211 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 SPEM2Q0P670 501 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 HSP90AA2PQ14568 343 aaPredicted RBP4.93□□□□□ -1.62
PMS1-216ENST00000447734 WIPI1Q5MNZ9 446 aaPredicted RBP4.93□□□□□ -1.62
PMS1-216ENST00000447734 FAM102BQ5T8I3 360 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 MAP1SQ66K74 1059 aaPredicted RBP4.93□□□□□ -1.62
PMS1-216ENST00000447734 NXNQ6DKJ4 435 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 NLRC3Q7RTR2 1065 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 DDX54Q8TDD1 881 aaKnown RBP4.93□□□□□ -1.62
PMS1-216ENST00000447734 KLHL6Q8WZ60 621 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 DDX1Q92499 740 aaKnown RBP4.93□□□□□ -1.62
PMS1-216ENST00000447734 ATG4CQ96DT6 458 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 YIPF4Q9BSR8 244 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 AARSD1Q9BTE6 412 aaKnown RBP4.93□□□□□ -1.62
PMS1-216ENST00000447734 ARHGEF4Q9NR80 690 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 NDFIP2Q9NV92 336 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 REV1Q9UBZ9 1251 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 ZNF180Q9UJW8 692 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 GDF2Q9UK05 429 aaPredicted RBP4.93□□□□□ -1.62
PMS1-216ENST00000447734 PRR36Q9H6K5 1346 aa4.93□□□□□ -1.62
PMS1-216ENST00000447734 LOC102724428A0A0B4J2F2 783 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 J3QW42 95 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 TNFRSF10CO14798 259 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 BRINP1O60477 761 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 SMNDC1O75940 238 aaKnown RBP eCLIP4.92□□□□□ -1.62
PMS1-216ENST00000447734 PDE6BP35913 854 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 CDK8P49336 464 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 NEK4P51957 841 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 SIK1P57059 783 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 MLLT1Q03111 559 aaPredicted RBP4.92□□□□□ -1.62
PMS1-216ENST00000447734 LAMC2Q13753 1193 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 STAT4Q14765 748 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 ZNF423Q2M1K9 1284 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 GFOD2Q3B7J2 385 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 YOD1Q5VVQ6 348 aaPredicted RBP4.92□□□□□ -1.62
PMS1-216ENST00000447734 PKN3Q6P5Z2 889 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 ADAMTSL4Q6UY14 1074 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 LHFPL2Q6ZUX7 228 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 SPATS2Q86XZ4 545 aaKnown RBP4.92□□□□□ -1.62
PMS1-216ENST00000447734 SCUBE1Q8IWY4 988 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 SVIPQ8NHG7 77 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 SLC7A3Q8WY07 619 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 ACSBG1Q96GR2 724 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 ABHD17AQ96GS6 310 aa4.92□□□□□ -1.62
PMS1-216ENST00000447734 SCYL1Q96KG9 808 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms