RNA–Protein interactions for RNA: ENST00000447463.5

HDAC7-215, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-215ENST00000447463 USP17L19D6RCP7 530 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 USP17L20D6RJB6 530 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 ZKSCAN1P17029 563 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-215ENST00000447463 RGS2P41220 211 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 USP17L24Q0WX57 530 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 TTF1Q15361 905 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-215ENST00000447463 ABCB5Q2M3G0 1257 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 MORN1Q5T089 497 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 POTEEQ6S8J3 1075 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 PLEKHH3Q7Z736 793 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 RHPN1Q8TCX5 695 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 USP6NLQ92738 828 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 RIOK1Q9BRS2 568 aaKnown RBP16.03■□□□□ 0.16
HDAC7-215ENST00000447463 KIAA1683Q9H0B3 1180 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 CWC22Q9HCG8 908 aaKnown RBP16.03■□□□□ 0.16
HDAC7-215ENST00000447463 IL1RAPL2Q9NP60 686 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 CABP5Q9NP86 173 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 OGDHLQ9ULD0 1010 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 RABGAP1Q9Y3P9 1069 aa16.03■□□□□ 0.16
HDAC7-215ENST00000447463 ZBED9Q6R2W3 1325 aa16.02■□□□□ 0.16
HDAC7-215ENST00000447463 NAV1Q8NEY1 1877 aa16.02■□□□□ 0.16
HDAC7-215ENST00000447463 MAGEB6P1A0A0J9YX57 407 aa16.02■□□□□ 0.16
HDAC7-215ENST00000447463 PLCD1P51178 756 aa16.02■□□□□ 0.16
HDAC7-215ENST00000447463 C11orf49Q9H6J7 331 aa16.02■□□□□ 0.16
HDAC7-215ENST00000447463 STAP2Q9UGK3 403 aa16.02■□□□□ 0.16
HDAC7-215ENST00000447463 POLR3DP05423 398 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-215ENST00000447463 MS4A1P11836 297 aa16.01■□□□□ 0.15
HDAC7-215ENST00000447463 VCAM1P19320 739 aa16.01■□□□□ 0.15
HDAC7-215ENST00000447463 SHMT1P34896 483 aa16.01■□□□□ 0.15
HDAC7-215ENST00000447463 MNX1P50219 401 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-215ENST00000447463 CCNA1P78396 465 aa16.01■□□□□ 0.15
HDAC7-215ENST00000447463 CACNB2Q08289 660 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-215ENST00000447463 SLC9C2Q5TAH2 1124 aa16.01■□□□□ 0.15
HDAC7-215ENST00000447463 CATSPERGQ6ZRH7 1159 aa16.01■□□□□ 0.15
HDAC7-215ENST00000447463 C7orf61Q8IZ16 206 aa16.01■□□□□ 0.15
HDAC7-215ENST00000447463 CLASRPQ8N2M8 674 aaKnown RBP16.01■□□□□ 0.15
HDAC7-215ENST00000447463 APBA2Q99767 749 aa16.01■□□□□ 0.15
HDAC7-215ENST00000447463 CRNKL1Q9BZJ0 848 aaKnown RBP16.01■□□□□ 0.15
HDAC7-215ENST00000447463 CNMDO75829 334 aa16■□□□□ 0.15
HDAC7-215ENST00000447463 GLRX3O76003 335 aaKnown RBP16■□□□□ 0.15
HDAC7-215ENST00000447463 PDE6AP16499 860 aa16■□□□□ 0.15
HDAC7-215ENST00000447463 GABPAQ06546 454 aa16■□□□□ 0.15
HDAC7-215ENST00000447463 CCL14Q16627 93 aa16■□□□□ 0.15
HDAC7-215ENST00000447463 LBX2Q6XYB7 198 aa16■□□□□ 0.15
HDAC7-215ENST00000447463 ACER1Q8TDN7 264 aa16■□□□□ 0.15
HDAC7-215ENST00000447463 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16■□□□□ 0.15
HDAC7-215ENST00000447463 KIF1BPQ96EK5 621 aa16■□□□□ 0.15
HDAC7-215ENST00000447463 GOLIM4O00461 696 aa15.99■□□□□ 0.15
HDAC7-215ENST00000447463 HMMRO75330 724 aa15.99■□□□□ 0.15
HDAC7-215ENST00000447463 IFIT2P09913 472 aaKnown RBP15.99■□□□□ 0.15
HDAC7-215ENST00000447463 MAP2K5Q13163 448 aa15.99■□□□□ 0.15
HDAC7-215ENST00000447463 RPAP2Q8IXW5 612 aaPredicted RBP15.99■□□□□ 0.15
HDAC7-215ENST00000447463 MCM9Q9NXL9 1143 aa15.99■□□□□ 0.15
HDAC7-215ENST00000447463 LAMA2P24043 3122 aaKnown RBP15.99■□□□□ 0.15
HDAC7-215ENST00000447463 ZNF532Q9HCE3 1301 aa15.98■□□□□ 0.15
HDAC7-215ENST00000447463 A0A0C4DFX4 3053 aa15.98■□□□□ 0.15
HDAC7-215ENST00000447463 APBB1O00213 710 aa15.98■□□□□ 0.15
HDAC7-215ENST00000447463 CCND3P30281 292 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-215ENST00000447463 GUCY1A2P33402 732 aa15.98■□□□□ 0.15
HDAC7-215ENST00000447463 BMP8BP34820 402 aa15.98■□□□□ 0.15
HDAC7-215ENST00000447463 SEPT2Q15019 361 aa15.98■□□□□ 0.15
HDAC7-215ENST00000447463 WDR78Q5VTH9 848 aa15.98■□□□□ 0.15
HDAC7-215ENST00000447463 DIEXFQ68CQ4 756 aaKnown RBP15.98■□□□□ 0.15
HDAC7-215ENST00000447463 EDC3Q96F86 508 aaKnown RBP15.98■□□□□ 0.15
HDAC7-215ENST00000447463 DNAJC2Q99543 621 aaKnown RBP15.98■□□□□ 0.15
HDAC7-215ENST00000447463 GDF15Q99988 308 aa15.98■□□□□ 0.15
HDAC7-215ENST00000447463 RPAP3Q9H6T3 665 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-215ENST00000447463 ZMYND8Q9ULU4 1186 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-215ENST00000447463 PFASO15067 1338 aa15.97■□□□□ 0.15
HDAC7-215ENST00000447463 TCRBV5S4A2TA0A5A2 114 aa15.97■□□□□ 0.15
HDAC7-215ENST00000447463 SLC15A5A6NIM6 579 aa15.97■□□□□ 0.15
HDAC7-215ENST00000447463 SPDYE16A6NNV3 312 aaPredicted RBP15.97■□□□□ 0.15
HDAC7-215ENST00000447463 MPHOSPH10O00566 681 aaKnown RBP15.97■□□□□ 0.15
HDAC7-215ENST00000447463 PTPREP23469 700 aa15.97■□□□□ 0.15
HDAC7-215ENST00000447463 MFSD14CQ5VZR4 134 aa15.97■□□□□ 0.15
HDAC7-215ENST00000447463 LHX8Q68G74 356 aa15.97■□□□□ 0.15
HDAC7-215ENST00000447463 SDR42E1Q8WUS8 393 aa15.97■□□□□ 0.15
HDAC7-215ENST00000447463 DCP1AQ9NPI6 582 aaPredicted RBP15.97■□□□□ 0.15
HDAC7-215ENST00000447463 BTBD7Q9P203 1132 aa15.97■□□□□ 0.15
HDAC7-215ENST00000447463 DDX19BQ9UMR2 479 aa15.97■□□□□ 0.15
HDAC7-215ENST00000447463 IVNS1ABPQ9Y6Y0 642 aa15.97■□□□□ 0.15
HDAC7-215ENST00000447463 MYH8P13535 1937 aa15.96■□□□□ 0.15
HDAC7-215ENST00000447463 SOX1O00570 391 aaPredicted RBP15.96■□□□□ 0.15
HDAC7-215ENST00000447463 RAB11FIP3O75154 756 aa15.96■□□□□ 0.15
HDAC7-215ENST00000447463 COL6A1P12109 1028 aa15.96■□□□□ 0.15
HDAC7-215ENST00000447463 EVX2Q03828 476 aa15.96■□□□□ 0.15
HDAC7-215ENST00000447463 SIRT2Q8IXJ6 389 aa15.96■□□□□ 0.15
HDAC7-215ENST00000447463 LCORLQ8N3X6 602 aa15.96■□□□□ 0.15
HDAC7-215ENST00000447463 BCL11AQ9H165 835 aa15.96■□□□□ 0.15
HDAC7-215ENST00000447463 ZBTB40Q9NUA8 1239 aa15.96■□□□□ 0.15
HDAC7-215ENST00000447463 SWAP70Q9UH65 585 aa15.96■□□□□ 0.15
HDAC7-215ENST00000447463 FRMPD3Q5JV73 1810 aa15.96■□□□□ 0.14
HDAC7-215ENST00000447463 HOXC6P09630 235 aa15.95■□□□□ 0.14
HDAC7-215ENST00000447463 SYN1P17600 705 aa15.95■□□□□ 0.14
HDAC7-215ENST00000447463 GRB14Q14449 540 aa15.95■□□□□ 0.14
HDAC7-215ENST00000447463 TMEM179Q6ZVK1 233 aa15.95■□□□□ 0.14
HDAC7-215ENST00000447463 PAG1Q9NWQ8 432 aa15.95■□□□□ 0.14
HDAC7-215ENST00000447463 HOXC10Q9NYD6 342 aa15.95■□□□□ 0.14
HDAC7-215ENST00000447463 FLRT1Q9NZU1 646 aa15.95■□□□□ 0.14
HDAC7-215ENST00000447463 COG6Q9Y2V7 657 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms