RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 KCNH5Q8NCM2 988 aa11.34□□□□□ -0.59
CASP4-203ENST00000444739 HDAC6Q9UBN7 1215 aa11.34□□□□□ -0.59
CASP4-203ENST00000444739 SRPRBQ9Y5M8 271 aaKnown RBP11.34□□□□□ -0.59
CASP4-203ENST00000444739 PPP1R3GB7ZBB8 358 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 GPAA1O43292 621 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 ZBTB43O43298 467 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 MMP1P03956 469 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 MYBL2P10244 700 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 CDC25AP30304 524 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 NBPF14Q5TI25 921 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
CASP4-203ENST00000444739 CRACR2AQ9BSW2 395 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 SELENOOQ9BVL4 669 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 TRIM10Q9UDY6 481 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 PCDHB6Q9Y5E3 794 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 KIF1AQ12756 1690 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 GRIN2DO15399 1336 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 GOLGA6CA6NDK9 693 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 GOLGA8AA7E2F4 631 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 GOLGA6DP0CG33 693 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 CCT6AP40227 531 aaKnown RBP11.33□□□□□ -0.6
CASP4-203ENST00000444739 PPFIA1Q13136 1202 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 KRT31Q15323 416 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 RILPL1Q5EBL4 403 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 DIS3L2Q8IYB7 885 aaKnown RBP11.33□□□□□ -0.6
CASP4-203ENST00000444739 GSPT2Q8IYD1 628 aaKnown RBP11.33□□□□□ -0.6
CASP4-203ENST00000444739 ZNF594Q96JF6 807 aaPredicted RBP11.33□□□□□ -0.6
CASP4-203ENST00000444739 GDAP1L1Q96MZ0 367 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 CXorf56Q9H5V9 222 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 SLC52A2Q9HAB3 445 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 GOLGA6AQ9NYA3 693 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 GUCA1BQ9UMX6 200 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 EID1Q9Y6B2 187 aa11.33□□□□□ -0.6
CASP4-203ENST00000444739 PKD1L3Q7Z443 1732 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 ARHGAP23Q9P227 1491 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 A0A087X0B3 334 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 ENC1O14682 589 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 ZMYND10O75800 440 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 CIAO1O76071 339 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 FMNL1O95466 1100 aaPredicted RBP11.32□□□□□ -0.6
CASP4-203ENST00000444739 ATP1A1P05023 1023 aaKnown RBP11.32□□□□□ -0.6
CASP4-203ENST00000444739 SSRP1Q08945 709 aaKnown RBP11.32□□□□□ -0.6
CASP4-203ENST00000444739 SCARF1Q14162 830 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 PAPD7Q5XG87 772 aaKnown RBP11.32□□□□□ -0.6
CASP4-203ENST00000444739 FBXW10Q5XX13 1052 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 CCNI2Q6ZMN8 369 aaPredicted RBP11.32□□□□□ -0.6
CASP4-203ENST00000444739 SH3RF1Q7Z6J0 888 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 SMYD4Q8IYR2 804 aaPredicted RBP11.32□□□□□ -0.6
CASP4-203ENST00000444739 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 SECISBP2LQ93073 1101 aaKnown RBP11.32□□□□□ -0.6
CASP4-203ENST00000444739 TMEM87BQ96K49 555 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 RPGRIP1Q96KN7 1286 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 MYL10Q9BUA6 226 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 SLC26A6Q9BXS9 759 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 CSRNP2Q9H175 543 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 EHD4Q9H223 541 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 LY9Q9HBG7 655 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 LIMA1Q9UHB6 759 aaKnown RBP11.32□□□□□ -0.6
CASP4-203ENST00000444739 PHF8Q9UPP1 1060 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 SAR1BQ9Y6B6 198 aa11.32□□□□□ -0.6
CASP4-203ENST00000444739 MYH13Q9UKX3 1938 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 LRRC10BA6NIK2 292 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 EIF3HO15372 352 aaKnown RBP eCLIP11.31□□□□□ -0.6
CASP4-203ENST00000444739 SRGAP2O75044 1071 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 NDUFA10O95299 355 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 CASP1P29466 404 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 ADORA1P30542 326 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 GUCY1A2P33402 732 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 FAM69CQ0P6D2 419 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 DPYDQ12882 1025 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 TRIM14Q14142 442 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 SGMS1Q86VZ5 419 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 CNPY4Q8N129 248 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 PLBD2Q8NHP8 589 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 NUP88Q99567 741 aaPredicted RBP11.31□□□□□ -0.6
CASP4-203ENST00000444739 CHP1Q99653 195 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 PUS3Q9BZE2 481 aaKnown RBP11.31□□□□□ -0.6
CASP4-203ENST00000444739 FOXP1Q9H334 677 aaPredicted RBP11.31□□□□□ -0.6
CASP4-203ENST00000444739 HAUS4Q9H6D7 363 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 STRN4Q9NRL3 753 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 EPN1Q9Y6I3 576 aaPredicted RBP11.31□□□□□ -0.6
CASP4-203ENST00000444739 CHD4Q14839 1912 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 NUP188Q5SRE5 1749 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 GOLGA6BA6NDN3 693 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 B4E1Z4 1266 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 N4BP3O15049 544 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 KRT9P35527 623 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 ZAP70P43403 619 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 AFMP43652 599 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 MNAT1P51948 309 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 SAFBQ15424 915 aaKnown RBP eCLIP11.31□□□□□ -0.6
CASP4-203ENST00000444739 ANKRD20A12PQ8NF67 263 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 BCAS4Q8TDM0 211 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 AENQ8WTP8 325 aaKnown RBP11.31□□□□□ -0.6
CASP4-203ENST00000444739 PAGE5Q96GU1 130 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 CAPS2Q9BXY5 557 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 KCNJ14Q9UNX9 436 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 LRP6O75581 1613 aa11.31□□□□□ -0.6
CASP4-203ENST00000444739 AKAP11Q9UKA4 1901 aa11.3□□□□□ -0.6
CASP4-203ENST00000444739 SNRPA1P09661 255 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms