RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 AGTPBP1Q9UPW5 1226 aa20.78■□□□□ 0.92
SMARCAL1-209ENST00000444508 SLC45A1Q9Y2W3 748 aa20.78■□□□□ 0.92
SMARCAL1-209ENST00000444508 FKTNO75072 461 aa20.77■□□□□ 0.92
SMARCAL1-209ENST00000444508 GUCY1A2P33402 732 aa20.77■□□□□ 0.92
SMARCAL1-209ENST00000444508 PABPC4Q13310 644 aaKnown RBP eCLIP20.77■□□□□ 0.92
SMARCAL1-209ENST00000444508 SKAP1Q86WV1 359 aa20.77■□□□□ 0.92
SMARCAL1-209ENST00000444508 ZMYM6O95789 1325 aa20.77■□□□□ 0.91
SMARCAL1-209ENST00000444508 RAD50Q92878 1312 aa20.77■□□□□ 0.91
SMARCAL1-209ENST00000444508 TLR2O60603 784 aa20.76■□□□□ 0.91
SMARCAL1-209ENST00000444508 FGAP02671 866 aa20.76■□□□□ 0.91
SMARCAL1-209ENST00000444508 CHMLP26374 656 aa20.76■□□□□ 0.91
SMARCAL1-209ENST00000444508 USP14P54578 494 aa20.76■□□□□ 0.91
SMARCAL1-209ENST00000444508 TREML2Q5T2D2 321 aa20.76■□□□□ 0.91
SMARCAL1-209ENST00000444508 USP17L2Q6R6M4 530 aa20.76■□□□□ 0.91
SMARCAL1-209ENST00000444508 ZNF444Q8N0Y2 327 aaPredicted RBP20.76■□□□□ 0.91
SMARCAL1-209ENST00000444508 PNMA3Q9UL41 463 aa20.76■□□□□ 0.91
SMARCAL1-209ENST00000444508 PRDM1O75626 825 aa20.75■□□□□ 0.91
SMARCAL1-209ENST00000444508 RASA1P20936 1047 aa20.75■□□□□ 0.91
SMARCAL1-209ENST00000444508 ICA1Q05084 483 aa20.75■□□□□ 0.91
SMARCAL1-209ENST00000444508 DGKZQ13574 1117 aa20.75■□□□□ 0.91
SMARCAL1-209ENST00000444508 ZYXQ15942 572 aaKnown RBP20.75■□□□□ 0.91
SMARCAL1-209ENST00000444508 BMP2KLQ5H9B9 411 aa20.75■□□□□ 0.91
SMARCAL1-209ENST00000444508 KIAA1683Q9H0B3 1180 aa20.75■□□□□ 0.91
SMARCAL1-209ENST00000444508 ARHGEF10LQ9HCE6 1279 aa20.75■□□□□ 0.91
SMARCAL1-209ENST00000444508 CTDSPL2Q05D32 466 aa20.74■□□□□ 0.91
SMARCAL1-209ENST00000444508 ACER1Q8TDN7 264 aa20.74■□□□□ 0.91
SMARCAL1-209ENST00000444508 SH2D4AQ9H788 454 aa20.74■□□□□ 0.91
SMARCAL1-209ENST00000444508 KANSL2Q9H9L4 492 aa20.74■□□□□ 0.91
SMARCAL1-209ENST00000444508 ANAPC4Q9UJX5 808 aa20.74■□□□□ 0.91
SMARCAL1-209ENST00000444508 CYP2C8P10632 490 aa20.73■□□□□ 0.91
SMARCAL1-209ENST00000444508 OSBPP22059 807 aa20.73■□□□□ 0.91
SMARCAL1-209ENST00000444508 SP3Q02447 781 aa20.73■□□□□ 0.91
SMARCAL1-209ENST00000444508 SMCR8Q8TEV9 937 aaPredicted RBP20.73■□□□□ 0.91
SMARCAL1-209ENST00000444508 DSCC1Q9BVC3 393 aa20.73■□□□□ 0.91
SMARCAL1-209ENST00000444508 EMILIN3Q9NT22 766 aa20.73■□□□□ 0.91
SMARCAL1-209ENST00000444508 TSPY3P0CV98 308 aa20.72■□□□□ 0.91
SMARCAL1-209ENST00000444508 TSPY8P0CW00 308 aa20.72■□□□□ 0.91
SMARCAL1-209ENST00000444508 ATP2B2Q01814 1243 aa20.72■□□□□ 0.91
SMARCAL1-209ENST00000444508 CLEC10AQ8IUN9 316 aa20.72■□□□□ 0.91
SMARCAL1-209ENST00000444508 ERO1AQ96HE7 468 aa20.72■□□□□ 0.91
SMARCAL1-209ENST00000444508 C12orf42Q96LP6 360 aa20.72■□□□□ 0.91
SMARCAL1-209ENST00000444508 IRX3P78415 501 aaPredicted RBP20.71■□□□□ 0.91
SMARCAL1-209ENST00000444508 TNS4Q8IZW8 715 aa20.71■□□□□ 0.91
SMARCAL1-209ENST00000444508 CPA4Q9UI42 421 aa20.71■□□□□ 0.91
SMARCAL1-209ENST00000444508 CTNNA3Q9UI47 895 aa20.71■□□□□ 0.91
SMARCAL1-209ENST00000444508 GREB1LQ9C091 1923 aaPredicted RBP20.7■□□□□ 0.91
SMARCAL1-209ENST00000444508 A0A1W2PRG0 241 aa20.7■□□□□ 0.9
SMARCAL1-209ENST00000444508 ZNF213O14771 459 aa20.7■□□□□ 0.9
SMARCAL1-209ENST00000444508 EEF2P13639 858 aaKnown RBP20.7■□□□□ 0.9
SMARCAL1-209ENST00000444508 HOXA7P31268 230 aaPredicted RBP20.7■□□□□ 0.9
SMARCAL1-209ENST00000444508 HAND2P61296 217 aa20.7■□□□□ 0.9
SMARCAL1-209ENST00000444508 C17orf99Q6UX52 265 aa20.7■□□□□ 0.9
SMARCAL1-209ENST00000444508 CTU1Q7Z7A3 348 aaKnown RBP20.7■□□□□ 0.9
SMARCAL1-209ENST00000444508 ASCC2Q9H1I8 757 aaPredicted RBP20.7■□□□□ 0.9
SMARCAL1-209ENST00000444508 IL25Q9H293 177 aa20.7■□□□□ 0.9
SMARCAL1-209ENST00000444508 TOMM22Q9NS69 142 aa20.7■□□□□ 0.9
SMARCAL1-209ENST00000444508 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.7■□□□□ 0.9
SMARCAL1-209ENST00000444508 ADGRA2Q96PE1 1338 aa20.7■□□□□ 0.9
SMARCAL1-209ENST00000444508 SGSM2O43147 1006 aa20.69■□□□□ 0.9
SMARCAL1-209ENST00000444508 ORC4O43929 436 aa20.69■□□□□ 0.9
SMARCAL1-209ENST00000444508 VCAM1P19320 739 aa20.69■□□□□ 0.9
SMARCAL1-209ENST00000444508 TFAP4Q01664 338 aa20.69■□□□□ 0.9
SMARCAL1-209ENST00000444508 KIF22Q14807 665 aa20.69■□□□□ 0.9
SMARCAL1-209ENST00000444508 FAM47AQ5JRC9 791 aa20.69■□□□□ 0.9
SMARCAL1-209ENST00000444508 NEDD1Q8NHV4 660 aa20.69■□□□□ 0.9
SMARCAL1-209ENST00000444508 CD99L2Q8TCZ2 262 aa20.69■□□□□ 0.9
SMARCAL1-209ENST00000444508 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.69■□□□□ 0.9
SMARCAL1-209ENST00000444508 TMX2Q9Y320 296 aa20.69■□□□□ 0.9
SMARCAL1-209ENST00000444508 TSPY2A6NKD2 308 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 USP17L15C9J2P7 530 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 USP17L13C9JLJ4 530 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 USP17L11C9JVI0 530 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 USP17L18D6R9N7 530 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 USP17L22D6RA61 530 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 USP17L17D6RBQ6 530 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 USP17L19D6RCP7 530 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 USP17L20D6RJB6 530 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 RANBP6O60518 1105 aaKnown RBP20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 PCP11498 1178 aaKnown RBP20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 USP17L24Q0WX57 530 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 ARHGEF6Q15052 776 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 IMMTQ16891 758 aaKnown RBP20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 MFSD6Q6ZSS7 791 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 SIAH1Q8IUQ4 282 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 RNF41Q9H4P4 317 aaPredicted RBP20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 INCENPQ9NQS7 918 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 LAMA4Q16363 1823 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 PLIN4Q96Q06 1357 aa20.68■□□□□ 0.9
SMARCAL1-209ENST00000444508 FGRP09769 529 aa20.67■□□□□ 0.9
SMARCAL1-209ENST00000444508 GCLCP48506 637 aaPredicted RBP20.67■□□□□ 0.9
SMARCAL1-209ENST00000444508 RRP12Q5JTH9 1297 aaKnown RBP20.67■□□□□ 0.9
SMARCAL1-209ENST00000444508 PPP4R3BQ5MIZ7 849 aa20.67■□□□□ 0.9
SMARCAL1-209ENST00000444508 AKNAD1Q5T1N1 836 aa20.67■□□□□ 0.9
SMARCAL1-209ENST00000444508 CASC1Q6TDU7 716 aa20.67■□□□□ 0.9
SMARCAL1-209ENST00000444508 LPAR1Q92633 364 aa20.67■□□□□ 0.9
SMARCAL1-209ENST00000444508 VCPKMTQ9H867 229 aa20.67■□□□□ 0.9
SMARCAL1-209ENST00000444508 GOPCQ9HD26 462 aa20.67■□□□□ 0.9
SMARCAL1-209ENST00000444508 NYAP2Q9P242 653 aa20.67■□□□□ 0.9
SMARCAL1-209ENST00000444508 IGKV6D-41A0A0C4DH26 115 aa20.66■□□□□ 0.9
SMARCAL1-209ENST00000444508 RAD21O60216 631 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms