RNA–Protein interactions for RNA: ENST00000444179.5

SHC1-208, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-208ENST00000444179 POLR3DP05423 398 aaPredicted RBP13.2□□□□□ -0.3
SHC1-208ENST00000444179 SEPT2Q15019 361 aa13.2□□□□□ -0.3
SHC1-208ENST00000444179 SIAH1Q8IUQ4 282 aa13.2□□□□□ -0.3
SHC1-208ENST00000444179 GPRC5AQ8NFJ5 357 aa13.2□□□□□ -0.3
SHC1-208ENST00000444179 NKX2-3Q8TAU0 364 aa13.2□□□□□ -0.3
SHC1-208ENST00000444179 USP6NLQ92738 828 aa13.2□□□□□ -0.3
SHC1-208ENST00000444179 DYNLL2Q96FJ2 89 aa13.2□□□□□ -0.3
SHC1-208ENST00000444179 KIAA1683Q9H0B3 1180 aa13.2□□□□□ -0.3
SHC1-208ENST00000444179 CRISPLD2Q9H0B8 497 aa13.2□□□□□ -0.3
SHC1-208ENST00000444179 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
SHC1-208ENST00000444179 CYP2D7A0A087X1C5 515 aa13.19□□□□□ -0.3
SHC1-208ENST00000444179 MBD4O95243 580 aa13.19□□□□□ -0.3
SHC1-208ENST00000444179 VCAM1P19320 739 aa13.19□□□□□ -0.3
SHC1-208ENST00000444179 ERVK-9P63128 1117 aa13.19□□□□□ -0.3
SHC1-208ENST00000444179 ERVK-24P63145 666 aa13.19□□□□□ -0.3
SHC1-208ENST00000444179 KIAA1755Q5JYT7 1200 aa13.19□□□□□ -0.3
SHC1-208ENST00000444179 CATSPERGQ6ZRH7 1159 aa13.19□□□□□ -0.3
SHC1-208ENST00000444179 TRIB2Q92519 343 aa13.19□□□□□ -0.3
SHC1-208ENST00000444179 LRRCC1Q9C099 1032 aa13.19□□□□□ -0.3
SHC1-208ENST00000444179 MYH1P12882 1939 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 USP17L15C9J2P7 530 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 CYP2B6P20813 491 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 USP17L24Q0WX57 530 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 PAGR1Q9BTK6 254 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.18□□□□□ -0.3
SHC1-208ENST00000444179 PUS7LQ9H0K6 701 aaKnown RBP13.18□□□□□ -0.3
SHC1-208ENST00000444179 CHMP4BQ9H444 224 aaKnown RBP13.18□□□□□ -0.3
SHC1-208ENST00000444179 DCTPP1Q9H773 170 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 BTBD7Q9P203 1132 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 PLXNB2O15031 1838 aa13.18□□□□□ -0.3
SHC1-208ENST00000444179 FARP2O94887 1054 aaPredicted RBP13.17□□□□□ -0.3
SHC1-208ENST00000444179 TFRCP02786 760 aaKnown RBP13.17□□□□□ -0.3
SHC1-208ENST00000444179 HMGCRP04035 888 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 MNX1P50219 401 aaPredicted RBP13.17□□□□□ -0.3
SHC1-208ENST00000444179 UBE3CQ15386 1083 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 CCL14Q16627 93 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 MORN1Q5T089 497 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 MAP3K21Q5TCX8 1036 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 TSHZ3Q63HK5 1081 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 GPR142Q7Z601 462 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 CLEC10AQ8IUN9 316 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 DIS3LQ8TF46 1054 aaKnown RBP13.17□□□□□ -0.3
SHC1-208ENST00000444179 DPF3Q92784 378 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 GCC1Q96CN9 775 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 FEZ1Q99689 392 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 CABP5Q9NP86 173 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 DOCK3Q8IZD9 2030 aa13.17□□□□□ -0.3
SHC1-208ENST00000444179 AKR1B1P15121 316 aa13.16□□□□□ -0.3
SHC1-208ENST00000444179 MAPK4P31152 587 aa13.16□□□□□ -0.3
SHC1-208ENST00000444179 USP14P54578 494 aa13.16□□□□□ -0.3
SHC1-208ENST00000444179 C12orf60Q5U649 245 aa13.16□□□□□ -0.3
SHC1-208ENST00000444179 RPAP3Q9H6T3 665 aaPredicted RBP13.16□□□□□ -0.3
SHC1-208ENST00000444179 ATP8A2Q9NTI2 1148 aa13.16□□□□□ -0.3
SHC1-208ENST00000444179 ECHDC1Q9NTX5 307 aa13.16□□□□□ -0.3
SHC1-208ENST00000444179 RABGAP1Q9Y3P9 1069 aa13.16□□□□□ -0.3
SHC1-208ENST00000444179 SPDYE16A6NNV3 312 aaPredicted RBP13.15□□□□□ -0.3
SHC1-208ENST00000444179 USP17L12C9JPN9 530 aa13.15□□□□□ -0.3
SHC1-208ENST00000444179 USP17L21D6R901 530 aa13.15□□□□□ -0.3
SHC1-208ENST00000444179 MPHOSPH10O00566 681 aaKnown RBP13.15□□□□□ -0.3
SHC1-208ENST00000444179 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
SHC1-208ENST00000444179 CTR9Q6PD62 1173 aa13.15□□□□□ -0.3
SHC1-208ENST00000444179 LBX2Q6XYB7 198 aa13.15□□□□□ -0.3
SHC1-208ENST00000444179 PLEKHH3Q7Z736 793 aa13.15□□□□□ -0.3
SHC1-208ENST00000444179 PAWRQ96IZ0 340 aaKnown RBP13.15□□□□□ -0.3
SHC1-208ENST00000444179 NUDT12Q9BQG2 462 aa13.15□□□□□ -0.3
SHC1-208ENST00000444179 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.15□□□□□ -0.32e-6■■■■■ 27.5
SHC1-208ENST00000444179 RPTORQ8N122 1335 aa13.14□□□□□ -0.31
SHC1-208ENST00000444179 NAV1Q8NEY1 1877 aa13.14□□□□□ -0.31
SHC1-208ENST00000444179 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
SHC1-208ENST00000444179 CDK8P49336 464 aa13.14□□□□□ -0.31
SHC1-208ENST00000444179 FXR1P51114 621 aaKnown RBP eCLIP13.14□□□□□ -0.31
SHC1-208ENST00000444179 CACNB2Q08289 660 aaPredicted RBP13.14□□□□□ -0.31
SHC1-208ENST00000444179 OTUD7AQ8TE49 926 aaPredicted RBP13.14□□□□□ -0.31
SHC1-208ENST00000444179 GTF3C2Q8WUA4 911 aaPredicted RBP13.14□□□□□ -0.31
SHC1-208ENST00000444179 SOCS4Q8WXH5 440 aa13.14□□□□□ -0.31
SHC1-208ENST00000444179 STRBPQ96SI9 672 aaKnown RBP13.14□□□□□ -0.31
SHC1-208ENST00000444179 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.14□□□□□ -0.31
SHC1-208ENST00000444179 PRO3102Q9H379 93 aa13.14□□□□□ -0.31
SHC1-208ENST00000444179 HMX1Q9NP08 348 aaPredicted RBP13.14□□□□□ -0.31
SHC1-208ENST00000444179 FLRT1Q9NZU1 646 aa13.14□□□□□ -0.31
SHC1-208ENST00000444179 SWAP70Q9UH65 585 aa13.14□□□□□ -0.31
SHC1-208ENST00000444179 SLC4A4Q9Y6R1 1079 aa13.14□□□□□ -0.31
SHC1-208ENST00000444179 LAMA3Q16787 3333 aa13.14□□□□□ -0.31
SHC1-208ENST00000444179 CCND3P30281 292 aaPredicted RBP13.13□□□□□ -0.31
SHC1-208ENST00000444179 LHX8Q68G74 356 aa13.13□□□□□ -0.31
SHC1-208ENST00000444179 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
SHC1-208ENST00000444179 TMEM179Q6ZVK1 233 aa13.13□□□□□ -0.31
SHC1-208ENST00000444179 C16orf86Q6ZW13 317 aa13.13□□□□□ -0.31
SHC1-208ENST00000444179 OSBP2Q969R2 916 aa13.13□□□□□ -0.31
SHC1-208ENST00000444179 HTATIP2Q9BUP3 242 aa13.13□□□□□ -0.31
SHC1-208ENST00000444179 GSG1L2A8MUP6 293 aa13.12□□□□□ -0.31
SHC1-208ENST00000444179 IGHA2P01877 340 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms