RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 ORC3Q9UBD5 711 aaPredicted RBP11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 MTMR6Q9Y217 621 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 SBF1O95248 1867 aa11.07□□□□□ -0.64
SMPD4P1-203ENST00000443839 COL2A1P02458 1487 aaPredicted RBP11.07□□□□□ -0.64
SMPD4P1-203ENST00000443839 SHMT1P34896 483 aa11.07□□□□□ -0.64
SMPD4P1-203ENST00000443839 TROAPQ12815 778 aa11.07□□□□□ -0.64
SMPD4P1-203ENST00000443839 FKBP1CQ5VVH2 108 aa11.07□□□□□ -0.64
SMPD4P1-203ENST00000443839 FOXP4Q8IVH2 680 aaPredicted RBP11.07□□□□□ -0.64
SMPD4P1-203ENST00000443839 GPC2Q8N158 579 aa11.07□□□□□ -0.64
SMPD4P1-203ENST00000443839 PNMA1Q8ND90 353 aa11.07□□□□□ -0.64
SMPD4P1-203ENST00000443839 CTCFLQ8NI51 663 aaPredicted RBP11.07□□□□□ -0.64
SMPD4P1-203ENST00000443839 ZBED3Q96IU2 234 aaPredicted RBP11.07□□□□□ -0.64
SMPD4P1-203ENST00000443839 FAM217BQ9NTX9 383 aaPredicted RBP11.07□□□□□ -0.64
SMPD4P1-203ENST00000443839 RNF181Q9P0P0 153 aa11.07□□□□□ -0.64
SMPD4P1-203ENST00000443839 FAM196BA6NMK8 535 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 H7C1D1 291 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 MPHOSPH10O00566 681 aaKnown RBP11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 BAG4O95429 457 aaKnown RBP11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 F13A1P00488 732 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 AKR1B1P15121 316 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 MCM4P33991 863 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 FOSBP53539 338 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 FOXD4L6Q3SYB3 417 aaPredicted RBP11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 TBC1D10BQ4KMP7 808 aaPredicted RBP11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 FOXD4L3Q6VB84 417 aaPredicted RBP11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 CDC37L1Q7L3B6 337 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 SAMD7Q7Z3H4 446 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 TRIM22Q8IYM9 498 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 FAM151AQ8WW52 585 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 ANKS1AQ92625 1134 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 PHKBQ93100 1093 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 CEP95Q96GE4 821 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 ATP6V1DQ9Y5K8 247 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 PLIN4Q96Q06 1357 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 GOLGA6L22H0YM25 854 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 EGFRP00533 1210 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 SLURP2P0DP57 97 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 FDPSP14324 419 aaKnown RBP11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 NTRK3Q16288 839 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 CLEC17AQ6ZS10 378 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 FAM83AQ86UY5 434 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 CCDC82Q8N4S0 544 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 CCDC17Q96LX7 622 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 SLC26A6Q9BXS9 759 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 DNAJC18Q9H819 358 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 RBM28Q9NW13 759 aaKnown RBP11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 SIPA1L1O43166 1804 aa11.06□□□□□ -0.64
SMPD4P1-203ENST00000443839 CNTNAP1P78357 1384 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 DDX11L8A8MPP1 907 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 IFNAR1P17181 557 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 TNNI2P48788 182 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 SSRP1Q08945 709 aaKnown RBP11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 TNFAIP1Q13829 316 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 GPR162Q16538 588 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 KIF4BQ2VIQ3 1234 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 CERKLQ49MI3 558 aaPredicted RBP11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 FERMT3Q86UX7 667 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 TMEM47Q9BQJ4 181 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 MTMR7Q9Y216 660 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 KIF5BP33176 963 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 CMTR1Q8N1G2 835 aaKnown RBP11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 C8orf76Q96K31 380 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 TMEM39BQ9GZU3 492 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 MTMR4Q9NYA4 1195 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 GPRC5DQ9NZD1 345 aa11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 HERC5Q9UII4 1024 aaKnown RBP11.05□□□□□ -0.64
SMPD4P1-203ENST00000443839 FMNL1O95466 1100 aaPredicted RBP11.04□□□□□ -0.64
SMPD4P1-203ENST00000443839 TOP1P11387 765 aaKnown RBP11.04□□□□□ -0.64
SMPD4P1-203ENST00000443839 AKAP17AQ02040 695 aaKnown RBP11.04□□□□□ -0.64
SMPD4P1-203ENST00000443839 GSE1Q14687 1217 aa11.04□□□□□ -0.64
SMPD4P1-203ENST00000443839 C9orf131Q5VYM1 1079 aa11.04□□□□□ -0.64
SMPD4P1-203ENST00000443839 MCTP1Q6DN14 999 aa11.04□□□□□ -0.64
SMPD4P1-203ENST00000443839 WASF1Q92558 559 aa11.04□□□□□ -0.64
SMPD4P1-203ENST00000443839 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMPD4P1-203ENST00000443839 STK36Q9NRP7 1315 aa11.04□□□□□ -0.64
SMPD4P1-203ENST00000443839 PLEKHA8P1O95397 391 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 TTLL1O95922 423 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 GUCY1B3Q02153 619 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 PPP4R3BQ5MIZ7 849 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 TATDN1Q6P1N9 297 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 METTL16Q86W50 562 aaKnown RBP11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 CLEC10AQ8IUN9 316 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 CHAMP1Q96JM3 812 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 ALG1Q9BT22 464 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 BAZ2BQ9UIF8 2168 aaKnown RBP11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 DDNO94850 711 aaPredicted RBP11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 TRIM29Q14134 588 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 RASA3Q14644 834 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 ABCB5Q2M3G0 1257 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 TMTC3Q6ZXV5 915 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 MAP3K14Q99558 947 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 CLIP2Q9UDT6 1046 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 HACL1Q9UJ83 578 aa11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 SCAF8Q9UPN6 1271 aaKnown RBP11.03□□□□□ -0.64
SMPD4P1-203ENST00000443839 IGKV6D-41A0A0C4DH26 115 aa11.02□□□□□ -0.64
SMPD4P1-203ENST00000443839 GDF11O95390 407 aa11.02□□□□□ -0.64
SMPD4P1-203ENST00000443839 DEXIO95424 95 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms