RNA–Protein interactions for RNA: ENST00000442240.5

SUCLG1-203, Transcript of succinate-CoA ligase alpha subunit, humanhuman

TSL 5

Gene SUCLG1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-203ENST00000442240 STX8Q9UNK0 236 aa13.8□□□□□ -0.2
SUCLG1-203ENST00000442240 BCS1LQ9Y276 419 aa13.8□□□□□ -0.2
SUCLG1-203ENST00000442240 ATRNL1Q5VV63 1379 aa13.8□□□□□ -0.2
SUCLG1-203ENST00000442240 EIF6P56537 245 aaKnown RBP13.79□□□□□ -0.2
SUCLG1-203ENST00000442240 GRM4Q14833 912 aa13.79□□□□□ -0.2
SUCLG1-203ENST00000442240 SLC4A8Q2Y0W8 1093 aa13.79□□□□□ -0.2
SUCLG1-203ENST00000442240 FOXD4L6Q3SYB3 417 aaPredicted RBP13.79□□□□□ -0.2
SUCLG1-203ENST00000442240 L1TD1Q5T7N2 865 aaKnown RBP13.79□□□□□ -0.2
SUCLG1-203ENST00000442240 FOXD4L3Q6VB84 417 aaPredicted RBP13.79□□□□□ -0.2
SUCLG1-203ENST00000442240 NKX2-3Q8TAU0 364 aa13.79□□□□□ -0.2
SUCLG1-203ENST00000442240 PHKBQ93100 1093 aa13.79□□□□□ -0.2
SUCLG1-203ENST00000442240 DDX4Q9NQI0 724 aaKnown RBP13.79□□□□□ -0.2
SUCLG1-203ENST00000442240 KCNQ5Q9NR82 932 aa13.79□□□□□ -0.2
SUCLG1-203ENST00000442240 SPDYE2BA6NHP3 402 aa13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 RAD17O75943 681 aa13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 SPDYE6P0CI01 402 aa13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 SMARCA1P28370 1054 aa13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 PTGER2P43116 358 aa13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 NOVP48745 357 aa13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 TNNI2P48788 182 aa13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 KRT40Q6A162 431 aa13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 RCSD1Q6JBY9 416 aa13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 NBPF11Q86T75 865 aa13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 ZSCAN29Q8IWY8 852 aaPredicted RBP13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 GMLQ99445 158 aa13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 IL17RBQ9NRM6 502 aa13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 HERC5Q9UII4 1024 aaKnown RBP13.78□□□□□ -0.2
SUCLG1-203ENST00000442240 SMIM22K7EJ46 135 aa13.77□□□□□ -0.21
SUCLG1-203ENST00000442240 YEATS4O95619 227 aa13.77□□□□□ -0.21
SUCLG1-203ENST00000442240 TTLL1O95922 423 aa13.77□□□□□ -0.21
SUCLG1-203ENST00000442240 MMP1P03956 469 aa13.77□□□□□ -0.21
SUCLG1-203ENST00000442240 MYH6P13533 1939 aa13.77□□□□□ -0.21
SUCLG1-203ENST00000442240 FOSBP53539 338 aa13.77□□□□□ -0.21
SUCLG1-203ENST00000442240 KIF23Q02241 960 aaPredicted RBP13.77□□□□□ -0.21
SUCLG1-203ENST00000442240 JMYQ8N9B5 988 aa13.77□□□□□ -0.21
SUCLG1-203ENST00000442240 SLC44A5Q8NCS7 719 aa13.77□□□□□ -0.21
SUCLG1-203ENST00000442240 CCDC148Q8NFR7 591 aa13.77□□□□□ -0.21
SUCLG1-203ENST00000442240 KCNG4Q8TDN1 519 aa13.77□□□□□ -0.21
SUCLG1-203ENST00000442240 CNTNAP5Q8WYK1 1306 aa13.77□□□□□ -0.21
SUCLG1-203ENST00000442240 FOXP1Q9H334 677 aaPredicted RBP13.77□□□□□ -0.21
SUCLG1-203ENST00000442240 PSDA5PKW4 1024 aaPredicted RBP13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 hCG_1984214I3L0E3 225 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 NMT2O60551 498 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 PARP1P09874 1014 aaKnown RBP13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 CALML3P27482 149 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 GUCY1B3Q02153 619 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 NFIAQ12857 509 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 TNFAIP1Q13829 316 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 SPDYE2Q495Y8 402 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 ASPRV1Q53RT3 343 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 MYSM1Q5VVJ2 828 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 CAVIN1Q6NZI2 390 aaKnown RBP13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 FAM83AQ86UY5 434 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 ZNF713Q8N859 430 aaPredicted RBP13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 CCDC12Q8WUD4 166 aaPredicted RBP13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 LEO1Q8WVC0 666 aaPredicted RBP13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 FAM151AQ8WW52 585 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 TMEM47Q9BQJ4 181 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 SH3GLB2Q9NR46 395 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 POLR3EQ9NVU0 708 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 RTEL1Q9NZ71 1219 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 FAM198AQ9UFP1 575 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 SYNPO2Q9UMS6 1093 aa13.76□□□□□ -0.21
SUCLG1-203ENST00000442240 COL4A5P29400 1685 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 GREB1LQ9C091 1923 aaPredicted RBP13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 GOLGA6L3A6NEY3 463 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 NFKBIEO00221 500 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 U2AF2P26368 475 aaKnown RBP eCLIP13.75□□□□□ -0.213e-7■■■■□ 19.9
SUCLG1-203ENST00000442240 SHMT1P34896 483 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 EVX2Q03828 476 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 CXCL9Q07325 125 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 CCDC183Q5T5S1 534 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 GALNT17Q6IS24 598 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 TMEM179Q6ZVK1 233 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 METTL16Q86W50 562 aaKnown RBP13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 GPT2Q8TD30 523 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 DPF2Q92785 391 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 CEP95Q96GE4 821 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 SPZ1Q9BXG8 430 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 GZF1Q9H116 711 aaPredicted RBP13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 TDRD3Q9H7E2 651 aaKnown RBP13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 GDPD2Q9HCC8 539 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 CABP5Q9NP86 173 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 MTMR4Q9NYA4 1195 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 CEP131Q9UPN4 1083 aa13.75□□□□□ -0.21
SUCLG1-203ENST00000442240 IGKV6D-41A0A0C4DH26 115 aa13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 MPHOSPH10O00566 681 aaKnown RBP13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 PLEKHA8P1O95397 391 aa13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 BMP15O95972 392 aa13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 SCG2P13521 617 aa13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 KRT2P35908 639 aa13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 ZNF445P59923 1031 aa13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 FUT2Q10981 343 aa13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 STK38Q15208 465 aa13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 SF3A1Q15459 793 aaKnown RBP13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 PFKFB3Q16875 520 aaPredicted RBP13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 CERKLQ49MI3 558 aaPredicted RBP13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 RILPL1Q5EBL4 403 aa13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 GPATCH4Q5T3I0 446 aaKnown RBP13.74□□□□□ -0.21
SUCLG1-203ENST00000442240 TATDN1Q6P1N9 297 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms