RNA–Protein interactions for RNA: ENST00000441238.1

TGFA-IT1-201, TGFA intronic transcript 1, humanhuman

TSL 5 BASIC

Gene TGFA-IT1, Length 436 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-IT1-201ENST00000441238 CTR9Q6PD62 1173 aa12.26□□□□□ -0.45
TGFA-IT1-201ENST00000441238 C16orf86Q6ZW13 317 aa12.26□□□□□ -0.45
TGFA-IT1-201ENST00000441238 TICAM2Q86XR7 235 aa12.26□□□□□ -0.45
TGFA-IT1-201ENST00000441238 ANKRD13CQ8N6S4 541 aa12.26□□□□□ -0.45
TGFA-IT1-201ENST00000441238 CCDC17Q96LX7 622 aa12.26□□□□□ -0.45
TGFA-IT1-201ENST00000441238 P2RX7Q99572 595 aaKnown RBP12.26□□□□□ -0.45
TGFA-IT1-201ENST00000441238 SLC4A4Q9Y6R1 1079 aa12.26□□□□□ -0.45
TGFA-IT1-201ENST00000441238 MYPNQ86TC9 1320 aa12.26□□□□□ -0.45
TGFA-IT1-201ENST00000441238 POTEFA5A3E0 1075 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 CDK8P49336 464 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 HERVK_113P62684 666 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 PRKCZQ05513 592 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 SEPT2Q15019 361 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 RAB3GAP1Q15042 981 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 POTEEQ6S8J3 1075 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 LBX2Q6XYB7 198 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 TMEM179Q6ZVK1 233 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 SIAH1Q8IUQ4 282 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 SLC44A5Q8NCS7 719 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 ACER1Q8TDN7 264 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 GTF3C2Q8WUA4 911 aaPredicted RBP12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 DYNLL2Q96FJ2 89 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 DDRGK1Q96HY6 314 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 ZNFX1Q9P2E3 1918 aaKnown RBP12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 MYH4Q9Y623 1939 aa12.25□□□□□ -0.45
TGFA-IT1-201ENST00000441238 CYP2D7A0A087X1C5 515 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 A0A1W2PRG0 241 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 USP17L15C9J2P7 530 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 USP17L13C9JLJ4 530 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 USP17L11C9JVI0 530 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 USP17L18D6R9N7 530 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 USP17L22D6RA61 530 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 USP17L17D6RBQ6 530 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 USP17L19D6RCP7 530 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 USP17L20D6RJB6 530 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 SMIM22K7EJ46 135 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 GPAA1O43292 621 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 GNAT2P19087 354 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 VCAM1P19320 739 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 GRK4P32298 578 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 FLT3LGP49771 235 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 PDE1AP54750 535 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 IRX3P78415 501 aaPredicted RBP12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 USP17L24Q0WX57 530 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 ZMYM1Q5SVZ6 1142 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 CATSPERGQ6ZRH7 1159 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 AMOTL1Q8IY63 956 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 RAET1EQ8TD07 263 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 PXYLP1Q8TE99 480 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 SH3TC2Q8TF17 1288 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 ROBO3Q96MS0 1386 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 RBPJLQ9UBG7 517 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 ARPP21Q9UBL0 812 aaPredicted RBP12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 GJD2Q9UKL4 321 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 GABRQQ9UN88 632 aa12.24□□□□□ -0.45
TGFA-IT1-201ENST00000441238 A0A0G2JMZ2 1700 aa12.23□□□□□ -0.45
TGFA-IT1-201ENST00000441238 M0R2C6 588 aa12.23□□□□□ -0.45
TGFA-IT1-201ENST00000441238 TNPO2O14787 897 aaKnown RBP12.23□□□□□ -0.45
TGFA-IT1-201ENST00000441238 SLAIN1Q8ND83 568 aa12.23□□□□□ -0.45
TGFA-IT1-201ENST00000441238 EXOC6Q8TAG9 804 aa12.23□□□□□ -0.45
TGFA-IT1-201ENST00000441238 COA7Q96BR5 231 aa12.23□□□□□ -0.45
TGFA-IT1-201ENST00000441238 FEZ1Q99689 392 aa12.23□□□□□ -0.45
TGFA-IT1-201ENST00000441238 TMEM106CQ9BVX2 250 aa12.23□□□□□ -0.45
TGFA-IT1-201ENST00000441238 RWDD1Q9H446 243 aaPredicted RBP12.23□□□□□ -0.45
TGFA-IT1-201ENST00000441238 TXNRD2Q9NNW7 524 aa12.23□□□□□ -0.45
TGFA-IT1-201ENST00000441238 TMX2Q9Y320 296 aa12.23□□□□□ -0.45
TGFA-IT1-201ENST00000441238 RABGAP1Q9Y3P9 1069 aa12.23□□□□□ -0.45
TGFA-IT1-201ENST00000441238 PATL2C9JE40 543 aaKnown RBP12.22□□□□□ -0.45
TGFA-IT1-201ENST00000441238 ECM2O94769 699 aaPredicted RBP12.22□□□□□ -0.45
TGFA-IT1-201ENST00000441238 AKR1B1P15121 316 aa12.22□□□□□ -0.45
TGFA-IT1-201ENST00000441238 ERVK-9P63128 1117 aa12.22□□□□□ -0.45
TGFA-IT1-201ENST00000441238 ERVK-24P63145 666 aa12.22□□□□□ -0.45
TGFA-IT1-201ENST00000441238 GPRC5AQ8NFJ5 357 aa12.22□□□□□ -0.45
TGFA-IT1-201ENST00000441238 EPB41L4AQ9HCS5 686 aaPredicted RBP12.22□□□□□ -0.45
TGFA-IT1-201ENST00000441238 ZBTB47Q9UFB7 747 aaPredicted RBP12.22□□□□□ -0.45
TGFA-IT1-201ENST00000441238 COL11A1P12107 1806 aaPredicted RBP12.22□□□□□ -0.45
TGFA-IT1-201ENST00000441238 MPHOSPH10O00566 681 aaKnown RBP12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 ADCY3O60266 1144 aa12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 IGHDP01880 384 aa12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 EN2P19622 333 aaPredicted RBP12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 Q3C1V9 767 aa12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 IFNL3Q8IZI9 196 aa12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 LPAR1Q92633 364 aa12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 EVI5LQ96CN4 794 aa12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 SEC62Q99442 399 aaKnown RBP12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 FSD1Q9BTV5 496 aa12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 OSBPL3Q9H4L5 887 aa12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 KANSL2Q9H9L4 492 aa12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 SUPT16HQ9Y5B9 1047 aaKnown RBP12.21□□□□□ -0.45
TGFA-IT1-201ENST00000441238 FOXP2O15409 715 aa12.2□□□□□ -0.46
TGFA-IT1-201ENST00000441238 CNMDO75829 334 aa12.2□□□□□ -0.46
TGFA-IT1-201ENST00000441238 GJB1P08034 283 aa12.2□□□□□ -0.46
TGFA-IT1-201ENST00000441238 CAPN2P17655 700 aa12.2□□□□□ -0.46
TGFA-IT1-201ENST00000441238 RASA1P20936 1047 aa12.2□□□□□ -0.46
TGFA-IT1-201ENST00000441238 MAPK4P31152 587 aa12.2□□□□□ -0.46
TGFA-IT1-201ENST00000441238 NUCB1Q02818 461 aa12.2□□□□□ -0.46
TGFA-IT1-201ENST00000441238 ICA1Q05084 483 aa12.2□□□□□ -0.46
TGFA-IT1-201ENST00000441238 MTFR1Q15390 333 aa12.2□□□□□ -0.46
TGFA-IT1-201ENST00000441238 ZYXQ15942 572 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms