RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 RASA3Q14644 834 aa32.63■■■□□ 2.81
CGREF1-207ENST00000440612 RRP1BQ14684 758 aaKnown RBP32.63■■■□□ 2.81
CGREF1-207ENST00000440612 RTN1Q16799 776 aa32.63■■■□□ 2.81
CGREF1-207ENST00000440612 SHROOM1Q2M3G4 852 aaPredicted RBP32.63■■■□□ 2.81
CGREF1-207ENST00000440612 CCDC17Q96LX7 622 aa32.63■■■□□ 2.81
CGREF1-207ENST00000440612 TEPSINQ96N21 525 aa32.63■■■□□ 2.81
CGREF1-207ENST00000440612 HACL1Q9UJ83 578 aa32.63■■■□□ 2.81
CGREF1-207ENST00000440612 MYH8P13535 1937 aa32.63■■■□□ 2.81
CGREF1-207ENST00000440612 STX6O43752 255 aa32.62■■■□□ 2.81
CGREF1-207ENST00000440612 GRIN3BO60391 1043 aa32.62■■■□□ 2.81
CGREF1-207ENST00000440612 NUP133Q8WUM0 1156 aa32.62■■■□□ 2.81
CGREF1-207ENST00000440612 MTMR4Q9NYA4 1195 aa32.62■■■□□ 2.81
CGREF1-207ENST00000440612 HERC5Q9UII4 1024 aaKnown RBP32.62■■■□□ 2.81
CGREF1-207ENST00000440612 MTMR6Q9Y217 621 aa32.62■■■□□ 2.81
CGREF1-207ENST00000440612 CPLX1O14810 134 aa32.61■■■□□ 2.81
CGREF1-207ENST00000440612 MAP3K10Q02779 954 aa32.61■■■□□ 2.81
CGREF1-207ENST00000440612 STX8Q9UNK0 236 aa32.61■■■□□ 2.81
CGREF1-207ENST00000440612 JAG1P78504 1218 aa32.6■■■□□ 2.81
CGREF1-207ENST00000440612 CERKLQ49MI3 558 aaPredicted RBP32.6■■■□□ 2.81
CGREF1-207ENST00000440612 LARP1BQ659C4 914 aaKnown RBP32.6■■■□□ 2.81
CGREF1-207ENST00000440612 PNMA1Q8ND90 353 aa32.6■■■□□ 2.81
CGREF1-207ENST00000440612 KAT14Q9H8E8 782 aa32.6■■■□□ 2.81
CGREF1-207ENST00000440612 TBC1D12O60347 775 aa32.59■■■□□ 2.81
CGREF1-207ENST00000440612 CALM1P0DP23 149 aa32.59■■■□□ 2.81
CGREF1-207ENST00000440612 CALM2P0DP24 149 aa32.59■■■□□ 2.81
CGREF1-207ENST00000440612 CALM3P0DP25 149 aa32.59■■■□□ 2.81
CGREF1-207ENST00000440612 IFNAR1P17181 557 aa32.59■■■□□ 2.81
CGREF1-207ENST00000440612 FUT2Q10981 343 aa32.59■■■□□ 2.81
CGREF1-207ENST00000440612 PPP2R5BQ15173 497 aa32.59■■■□□ 2.81
CGREF1-207ENST00000440612 NBPF11Q86T75 865 aa32.59■■■□□ 2.81
CGREF1-207ENST00000440612 CLEC10AQ8IUN9 316 aa32.59■■■□□ 2.81
CGREF1-207ENST00000440612 TNNI2P48788 182 aa32.59■■■□□ 2.81
CGREF1-207ENST00000440612 WDR33Q9C0J8 1336 aaKnown RBP32.58■■■□□ 2.81
CGREF1-207ENST00000440612 GUCY1A2P33402 732 aa32.58■■■□□ 2.81
CGREF1-207ENST00000440612 TNFAIP1Q13829 316 aa32.58■■■□□ 2.81
CGREF1-207ENST00000440612 PHKBQ93100 1093 aa32.58■■■□□ 2.81
CGREF1-207ENST00000440612 TRIM34Q9BYJ4 488 aa32.58■■■□□ 2.81
CGREF1-207ENST00000440612 TOP1P11387 765 aaKnown RBP32.57■■■□□ 2.8
CGREF1-207ENST00000440612 PDCP20941 246 aa32.57■■■□□ 2.8
CGREF1-207ENST00000440612 CLEC17AQ6ZS10 378 aa32.57■■■□□ 2.8
CGREF1-207ENST00000440612 MAP3K14Q99558 947 aa32.57■■■□□ 2.8
CGREF1-207ENST00000440612 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.57■■■□□ 2.8
CGREF1-207ENST00000440612 CCDC196A0A1B0GTZ2 297 aa32.56■■■□□ 2.8
CGREF1-207ENST00000440612 ZSCAN22P10073 491 aaPredicted RBP32.56■■■□□ 2.8
CGREF1-207ENST00000440612 ANGEL2Q5VTE6 544 aaKnown RBP32.56■■■□□ 2.8
CGREF1-207ENST00000440612 FOXD4L5Q5VV16 416 aaPredicted RBP32.56■■■□□ 2.8
CGREF1-207ENST00000440612 CMTR1Q8N1G2 835 aaKnown RBP32.56■■■□□ 2.8
CGREF1-207ENST00000440612 FOXD4L4Q8WXT5 416 aaPredicted RBP32.56■■■□□ 2.8
CGREF1-207ENST00000440612 L3MBTL3Q96JM7 780 aaPredicted RBP32.56■■■□□ 2.8
CGREF1-207ENST00000440612 ORC3Q9UBD5 711 aaPredicted RBP32.56■■■□□ 2.8
CGREF1-207ENST00000440612 ZC3H4Q9UPT8 1303 aaKnown RBP32.56■■■□□ 2.8
CGREF1-207ENST00000440612 CDKL5O76039 1030 aa32.56■■■□□ 2.8
CGREF1-207ENST00000440612 DEFB129Q9H1M3 183 aa32.56■■■□□ 2.8
CGREF1-207ENST00000440612 PLEKHA8P1O95397 391 aa32.55■■■□□ 2.8
CGREF1-207ENST00000440612 CPLX2Q6PUV4 134 aaKnown RBP32.55■■■□□ 2.8
CGREF1-207ENST00000440612 SIAH1Q8IUQ4 282 aa32.55■■■□□ 2.8
CGREF1-207ENST00000440612 FAM184AQ8NB25 1140 aa32.55■■■□□ 2.8
CGREF1-207ENST00000440612 RBM28Q9NW13 759 aaKnown RBP32.55■■■□□ 2.8
CGREF1-207ENST00000440612 STK36Q9NRP7 1315 aa32.54■■■□□ 2.8
CGREF1-207ENST00000440612 UBE2Q2LH0YL09 131 aa32.54■■■□□ 2.8
CGREF1-207ENST00000440612 MPHOSPH10O00566 681 aaKnown RBP32.54■■■□□ 2.8
CGREF1-207ENST00000440612 GDF11O95390 407 aa32.54■■■□□ 2.8
CGREF1-207ENST00000440612 GRM4Q14833 912 aa32.54■■■□□ 2.8
CGREF1-207ENST00000440612 TMTC3Q6ZXV5 915 aa32.54■■■□□ 2.8
CGREF1-207ENST00000440612 ADARB2Q9NS39 739 aaKnown RBP32.54■■■□□ 2.8
CGREF1-207ENST00000440612 FMNL1O95466 1100 aaPredicted RBP32.53■■■□□ 2.8
CGREF1-207ENST00000440612 TTLL1O95922 423 aa32.53■■■□□ 2.8
CGREF1-207ENST00000440612 PDIA4P13667 645 aaKnown RBP32.53■■■□□ 2.8
CGREF1-207ENST00000440612 NFKBIBQ15653 356 aa32.53■■■□□ 2.8
CGREF1-207ENST00000440612 CDC37L1Q7L3B6 337 aa32.53■■■□□ 2.8
CGREF1-207ENST00000440612 ABCB5Q2M3G0 1257 aa32.53■■■□□ 2.8
CGREF1-207ENST00000440612 TMEM179Q6ZVK1 233 aa32.53■■■□□ 2.8
CGREF1-207ENST00000440612 MIGA2Q7L4E1 593 aa32.53■■■□□ 2.8
CGREF1-207ENST00000440612 RASGRP2Q7LDG7 609 aa32.53■■■□□ 2.8
CGREF1-207ENST00000440612 GGA3Q9NZ52 723 aa32.53■■■□□ 2.8
CGREF1-207ENST00000440612 SEPT2Q15019 361 aa32.52■■■□□ 2.8
CGREF1-207ENST00000440612 CLIP2Q9UDT6 1046 aa32.52■■■□□ 2.8
CGREF1-207ENST00000440612 MAD2L2Q9UI95 211 aa32.52■■■□□ 2.8
CGREF1-207ENST00000440612 LMOD1P29536 600 aaPredicted RBP32.51■■■□□ 2.79
CGREF1-207ENST00000440612 DPY19L2Q6NUT2 758 aa32.51■■■□□ 2.79
CGREF1-207ENST00000440612 APOBEC3FQ8IUX4 373 aaKnown RBP32.51■■■□□ 2.79
CGREF1-207ENST00000440612 SRBD1Q8N5C6 995 aaKnown RBP32.51■■■□□ 2.79
CGREF1-207ENST00000440612 CTCFLQ8NI51 663 aaPredicted RBP32.51■■■□□ 2.79
CGREF1-207ENST00000440612 VPS37CA5D8V6 355 aaPredicted RBP32.5■■■□□ 2.79
CGREF1-207ENST00000440612 F13A1P00488 732 aa32.5■■■□□ 2.79
CGREF1-207ENST00000440612 GH2P01242 217 aa32.5■■■□□ 2.79
CGREF1-207ENST00000440612 STAG2Q8N3U4 1231 aa32.5■■■□□ 2.79
CGREF1-207ENST00000440612 CCDC82Q8N4S0 544 aa32.5■■■□□ 2.79
CGREF1-207ENST00000440612 MKL1Q969V6 931 aa32.5■■■□□ 2.79
CGREF1-207ENST00000440612 CHAMP1Q96JM3 812 aa32.5■■■□□ 2.79
CGREF1-207ENST00000440612 AIFM3Q96NN9 605 aa32.5■■■□□ 2.79
CGREF1-207ENST00000440612 SLC26A6Q9BXS9 759 aa32.5■■■□□ 2.79
CGREF1-207ENST00000440612 KANSL2Q9H9L4 492 aa32.5■■■□□ 2.79
CGREF1-207ENST00000440612 KIF3AQ9Y496 699 aa32.5■■■□□ 2.79
CGREF1-207ENST00000440612 PALM3A6NDB9 673 aaPredicted RBP32.5■■■□□ 2.79
CGREF1-207ENST00000440612 GLTPD2A6NH11 291 aa32.5■■■□□ 2.79
CGREF1-207ENST00000440612 SLC35G1Q2M3R5 365 aa32.5■■■□□ 2.79
CGREF1-207ENST00000440612 LRRC47Q8N1G4 583 aaKnown RBP32.5■■■□□ 2.79
CGREF1-207ENST00000440612 NYAP2Q9P242 653 aa32.5■■■□□ 2.79
CGREF1-207ENST00000440612 PHF20L1A8MW92 1017 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms