RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 PSMD14O00487 310 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 NLRP5P59047 1200 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 ILDR1Q86SU0 546 aaPredicted RBP17.4■□□□□ 0.38
CPSF7-205ENST00000439958 FSIP1Q8NA03 581 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 PGBD1Q96JS3 809 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 NUP62CLQ9H1M0 184 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 TMOD2Q9NZR1 351 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 CLIP2Q9UDT6 1046 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 GAKO14976 1311 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 NR1I2O75469 434 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 CALM1P0DP23 149 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 CALM2P0DP24 149 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 CALM3P0DP25 149 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 AKR1B1P15121 316 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 HEATR3Q7Z4Q2 680 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 OXER1Q8TDS5 423 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 TMEM47Q9BQJ4 181 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 CABP5Q9NP86 173 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 CCDC88AQ3V6T2 1871 aa17.4■□□□□ 0.38
CPSF7-205ENST00000439958 A0A1B0GVL5 298 aa17.39■□□□□ 0.38
CPSF7-205ENST00000439958 CERS3Q8IU89 383 aa17.39■□□□□ 0.38
CPSF7-205ENST00000439958 SRBD1Q8N5C6 995 aaKnown RBP17.39■□□□□ 0.38
CPSF7-205ENST00000439958 UBA5Q9GZZ9 404 aa17.39■□□□□ 0.38
CPSF7-205ENST00000439958 SPECC1Q5M775 1068 aa17.39■□□□□ 0.37
CPSF7-205ENST00000439958 NBPF11Q86T75 865 aa17.39■□□□□ 0.37
CPSF7-205ENST00000439958 C7orf43Q8WVR3 580 aa17.39■□□□□ 0.37
CPSF7-205ENST00000439958 PRMT6Q96LA8 375 aaPredicted RBP17.39■□□□□ 0.37
CPSF7-205ENST00000439958 GDF11O95390 407 aa17.39■□□□□ 0.37
CPSF7-205ENST00000439958 CCDC96Q2M329 555 aa17.39■□□□□ 0.37
CPSF7-205ENST00000439958 CC2D2BQ6DHV5 1058 aa17.39■□□□□ 0.37
CPSF7-205ENST00000439958 TSPY26PQ9H489 355 aa17.39■□□□□ 0.37
CPSF7-205ENST00000439958 GPCPD1Q9NPB8 672 aa17.39■□□□□ 0.37
CPSF7-205ENST00000439958 IKQ13123 557 aaPredicted RBP17.38■□□□□ 0.37
CPSF7-205ENST00000439958 RCSD1Q6JBY9 416 aa17.38■□□□□ 0.37
CPSF7-205ENST00000439958 MTFR1LQ9H019 292 aa17.38■□□□□ 0.37
CPSF7-205ENST00000439958 OSBPL5Q9H0X9 879 aaPredicted RBP17.38■□□□□ 0.37
CPSF7-205ENST00000439958 RBSNQ9H1K0 784 aa17.38■□□□□ 0.37
CPSF7-205ENST00000439958 VEGFAP15692 232 aaPredicted RBP17.38■□□□□ 0.37
CPSF7-205ENST00000439958 DLGAP5Q15398 846 aa17.38■□□□□ 0.37
CPSF7-205ENST00000439958 SHROOM1Q2M3G4 852 aaPredicted RBP17.38■□□□□ 0.37
CPSF7-205ENST00000439958 FAM163AQ96GL9 167 aaPredicted RBP17.38■□□□□ 0.37
CPSF7-205ENST00000439958 RBM28Q9NW13 759 aaKnown RBP17.38■□□□□ 0.37
CPSF7-205ENST00000439958 COL11A2P13942 1736 aaPredicted RBP17.38■□□□□ 0.37
CPSF7-205ENST00000439958 SPTLC2O15270 562 aa17.38■□□□□ 0.37
CPSF7-205ENST00000439958 SDF4Q9BRK5 362 aa17.38■□□□□ 0.37
CPSF7-205ENST00000439958 C16orf86Q6ZW13 317 aa17.37■□□□□ 0.37
CPSF7-205ENST00000439958 TMTC3Q6ZXV5 915 aa17.37■□□□□ 0.37
CPSF7-205ENST00000439958 BRAPQ7Z569 592 aa17.37■□□□□ 0.37
CPSF7-205ENST00000439958 TMEM87AQ8NBN3 555 aa17.37■□□□□ 0.37
CPSF7-205ENST00000439958 TAOK3Q9H2K8 898 aa17.37■□□□□ 0.37
CPSF7-205ENST00000439958 KINO60870 393 aaKnown RBP17.37■□□□□ 0.37
CPSF7-205ENST00000439958 DDAH1O94760 285 aa17.37■□□□□ 0.37
CPSF7-205ENST00000439958 ANO1Q5XXA6 986 aa17.37■□□□□ 0.37
CPSF7-205ENST00000439958 LRSAM1Q6UWE0 723 aa17.37■□□□□ 0.37
CPSF7-205ENST00000439958 BRMS1Q9HCU9 246 aa17.37■□□□□ 0.37
CPSF7-205ENST00000439958 SUGT1Q9Y2Z0 365 aa17.37■□□□□ 0.37
CPSF7-205ENST00000439958 FAM205CA6NFA0 338 aa17.37■□□□□ 0.37
CPSF7-205ENST00000439958 DDTLA6NHG4 134 aaPredicted RBP17.37■□□□□ 0.37
CPSF7-205ENST00000439958 HHIPL2Q6UWX4 724 aa17.37■□□□□ 0.37
CPSF7-205ENST00000439958 HDAC9Q9UKV0 1011 aa17.37■□□□□ 0.37
CPSF7-205ENST00000439958 A0A087WWV3 80 aa17.36■□□□□ 0.37
CPSF7-205ENST00000439958 KLRF2D3W0D1 207 aa17.36■□□□□ 0.37
CPSF7-205ENST00000439958 CSRNP1Q96S65 589 aa17.36■□□□□ 0.37
CPSF7-205ENST00000439958 KCNA3P22001 575 aa17.36■□□□□ 0.37
CPSF7-205ENST00000439958 TMED8Q6PL24 325 aaPredicted RBP17.36■□□□□ 0.37
CPSF7-205ENST00000439958 RASGRP4Q8TDF6 673 aa17.36■□□□□ 0.37
CPSF7-205ENST00000439958 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.36■□□□□ 0.37
CPSF7-205ENST00000439958 PCDHA7Q9UN72 937 aa17.36■□□□□ 0.37
CPSF7-205ENST00000439958 MMP1P03956 469 aa17.35■□□□□ 0.37
CPSF7-205ENST00000439958 PARP1P09874 1014 aaKnown RBP17.35■□□□□ 0.37
CPSF7-205ENST00000439958 ZRSR1Q15695 479 aaKnown RBP17.35■□□□□ 0.37
CPSF7-205ENST00000439958 DGKHQ86XP1 1220 aa17.35■□□□□ 0.37
CPSF7-205ENST00000439958 NOSTRINQ8IVI9 506 aa17.35■□□□□ 0.37
CPSF7-205ENST00000439958 RNF26Q9BY78 433 aaPredicted RBP17.35■□□□□ 0.37
CPSF7-205ENST00000439958 ZDHHC15Q96MV8 337 aa17.35■□□□□ 0.37
CPSF7-205ENST00000439958 CLIC6Q96NY7 704 aa17.35■□□□□ 0.37
CPSF7-205ENST00000439958 DUOX1Q9NRD9 1551 aa17.35■□□□□ 0.37
CPSF7-205ENST00000439958 MAP3K11Q16584 847 aa17.35■□□□□ 0.37
CPSF7-205ENST00000439958 MIGA2Q7L4E1 593 aa17.35■□□□□ 0.37
CPSF7-205ENST00000439958 FSD2A1L4K1 749 aa17.34■□□□□ 0.37
CPSF7-205ENST00000439958 USP17L5A8MUK1 530 aa17.34■□□□□ 0.37
CPSF7-205ENST00000439958 FGRP09769 529 aa17.34■□□□□ 0.37
CPSF7-205ENST00000439958 RASSF7Q02833 373 aa17.34■□□□□ 0.37
CPSF7-205ENST00000439958 SHTN1A0MZ66 631 aa17.34■□□□□ 0.37
CPSF7-205ENST00000439958 ZNF445P59923 1031 aa17.34■□□□□ 0.37
CPSF7-205ENST00000439958 MRVI1Q9Y6F6 885 aa17.34■□□□□ 0.37
CPSF7-205ENST00000439958 SLC16A2P36021 539 aa17.34■□□□□ 0.37
CPSF7-205ENST00000439958 PIK3AP1Q6ZUJ8 805 aa17.34■□□□□ 0.37
CPSF7-205ENST00000439958 PDILTQ8N807 584 aa17.34■□□□□ 0.37
CPSF7-205ENST00000439958 MTA3Q9BTC8 594 aa17.34■□□□□ 0.37
CPSF7-205ENST00000439958 SCG2P13521 617 aa17.33■□□□□ 0.37
CPSF7-205ENST00000439958 KRT2P35908 639 aa17.33■□□□□ 0.37
CPSF7-205ENST00000439958 ZYXQ15942 572 aaKnown RBP17.33■□□□□ 0.37
CPSF7-205ENST00000439958 CERKLQ49MI3 558 aaPredicted RBP17.33■□□□□ 0.37
CPSF7-205ENST00000439958 NOM1Q5C9Z4 860 aaKnown RBP17.33■□□□□ 0.37
CPSF7-205ENST00000439958 RSBN1LQ6PCB5 846 aaPredicted RBP17.33■□□□□ 0.37
CPSF7-205ENST00000439958 LINC00301Q8NCQ3 95 aa17.33■□□□□ 0.37
CPSF7-205ENST00000439958 NEDD1Q8NHV4 660 aa17.33■□□□□ 0.37
CPSF7-205ENST00000439958 SEC63Q9UGP8 760 aaKnown RBP17.33■□□□□ 0.37
CPSF7-205ENST00000439958 ISM2Q6H9L7 571 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms