RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 ANKRD7Q92527 254 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 NAP1L3Q99457 506 aaPredicted RBP7.11□□□□□ -1.27
BDNF-211ENST00000439476 NAPGQ99747 312 aaPredicted RBP7.11□□□□□ -1.27
BDNF-211ENST00000439476 DESI2Q9BSY9 194 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 GLT8D2Q9H1C3 349 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 FANCLQ9NW38 375 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 ADGRB3O60242 1522 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 PRR36Q9H6K5 1346 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 RBM47A0AV96 593 aaKnown RBP7.11□□□□□ -1.27
BDNF-211ENST00000439476 B4E1Z4 1266 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 NDC80O14777 642 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 SEC31AO94979 1220 aaKnown RBP7.11□□□□□ -1.27
BDNF-211ENST00000439476 GCP02774 474 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 CCT6AP40227 531 aaKnown RBP7.11□□□□□ -1.27
BDNF-211ENST00000439476 TNNC1P63316 161 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 KMT5BQ4FZB7 885 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 RILPL1Q5EBL4 403 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 SWT1Q5T5J6 900 aaKnown RBP7.11□□□□□ -1.27
BDNF-211ENST00000439476 IQUBQ8NA54 791 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 TBC1D22AQ8WUA7 517 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 PHKBQ93100 1093 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 FERMT2Q96AC1 680 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 ARPC5LQ9BPX5 153 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 HOMER2Q9NSB8 354 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 DBNLQ9UJU6 430 aaKnown RBP7.11□□□□□ -1.27
BDNF-211ENST00000439476 HDAC9Q9UKV0 1011 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 RABL2BQ9UNT1 228 aa7.11□□□□□ -1.27
BDNF-211ENST00000439476 USP27XA6NNY8 438 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 AP1G2O75843 785 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 HSPD1P10809 573 aaKnown RBP7.1□□□□□ -1.27
BDNF-211ENST00000439476 FERP16591 822 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 ATP5DP30049 168 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 TOB2Q14106 344 aaPredicted RBP7.1□□□□□ -1.27
BDNF-211ENST00000439476 BRD3Q15059 726 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 DBN1Q16643 649 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 PROSER3Q2NL68 480 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 SDR16C5Q8N3Y7 309 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 FBXO18Q8NFZ0 1043 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 APPBP2Q92624 585 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 HAUS7Q99871 368 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 C6orf50Q9HD87 102 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 TTF2Q9UNY4 1162 aaKnown RBP7.1□□□□□ -1.27
BDNF-211ENST00000439476 MORC2Q9Y6X9 1032 aaPredicted RBP7.1□□□□□ -1.27
BDNF-211ENST00000439476 ARAP3Q8WWN8 1544 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 PPFIA2O75334 1257 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 SASH1O94885 1247 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 GNA11P29992 359 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 POSTNQ15063 836 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 TCERG1LQ5VWI1 586 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 DIS3L2Q8IYB7 885 aaKnown RBP7.1□□□□□ -1.27
BDNF-211ENST00000439476 RPGRQ92834 1020 aaKnown RBP7.1□□□□□ -1.27
BDNF-211ENST00000439476 ZNF594Q96JF6 807 aaPredicted RBP7.1□□□□□ -1.27
BDNF-211ENST00000439476 UBA5Q9GZZ9 404 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 IL25Q9H293 177 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 MTRF1LQ9UGC7 380 aaKnown RBP7.1□□□□□ -1.27
BDNF-211ENST00000439476 MLH3Q9UHC1 1453 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 KIAA1210Q9ULL0 1709 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 B4DLN1 442 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 GPAA1O43292 621 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 SH3BP5O60239 455 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 MRPL12P52815 198 aaKnown RBP7.1□□□□□ -1.27
BDNF-211ENST00000439476 UBXN1Q04323 297 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 ARMC9Q7Z3E5 817 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 CTNNBL1Q8WYA6 563 aaPredicted RBP7.1□□□□□ -1.27
BDNF-211ENST00000439476 CCDC42Q96M95 316 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 SH3GL3Q99963 347 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 ANKIB1Q9P2G1 1089 aa7.1□□□□□ -1.27
BDNF-211ENST00000439476 LUC7L2Q9Y383 392 aaKnown RBP7.1□□□□□ -1.27
BDNF-211ENST00000439476 RRP15Q9Y3B9 282 aaKnown RBP7.1□□□□□ -1.27
BDNF-211ENST00000439476 EXOC5O00471 708 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 PNMA6AP0CW24 399 aaPredicted RBP7.09□□□□□ -1.27
BDNF-211ENST00000439476 PDE6BP35913 854 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 CFAP58Q5T655 872 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 IFIT1BQ5T764 474 aaKnown RBP7.09□□□□□ -1.27
BDNF-211ENST00000439476 GBP6Q6ZN66 633 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 B4GALNT4Q76KP1 1039 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 SYCP3Q8IZU3 236 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 MSANTD4Q8NCY6 345 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 FBF1Q8TES7 1133 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 VPS16Q9H269 839 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 CTIFO43310 598 aaKnown RBP7.09□□□□□ -1.27
BDNF-211ENST00000439476 ATP8B1O43520 1251 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 CCDC122Q5T0U0 273 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 HHATQ5VTY9 493 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 LINC00301Q8NCQ3 95 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 TMEM87BQ96K49 555 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 RPGRIP1Q96KN7 1286 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 COPRSQ9NQ92 184 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 PPME1Q9Y570 386 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 SLC4A4Q9Y6R1 1079 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 PHLPP2Q6ZVD8 1323 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 IPO5O00410 1097 aaKnown RBP7.09□□□□□ -1.27
BDNF-211ENST00000439476 KCNA6P17658 529 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 RPL13P26373 211 aaKnown RBP7.09□□□□□ -1.27
BDNF-211ENST00000439476 GOLGA8FQ08AF8 430 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 GOLGA8DPQ0D2H9 430 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 CHRNA2Q15822 529 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 AKNAD1Q5T1N1 836 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 TTC30AQ86WT1 665 aa7.09□□□□□ -1.27
BDNF-211ENST00000439476 PLBD2Q8NHP8 589 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms