RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 XAGE3Q8WTP9 111 aa5.75□□□□□ -1.49
HMGB3P12-201ENST00000438745 ZNF296Q8WUU4 475 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P12-201ENST00000438745 HSPA12BQ96MM6 686 aa5.75□□□□□ -1.49
HMGB3P12-201ENST00000438745 DPH2Q9BQC3 489 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P12-201ENST00000438745 BACH2Q9BYV9 841 aa5.75□□□□□ -1.49
HMGB3P12-201ENST00000438745 REV1Q9UBZ9 1251 aa5.75□□□□□ -1.49
HMGB3P12-201ENST00000438745 GGT7Q9UJ14 662 aa5.75□□□□□ -1.49
HMGB3P12-201ENST00000438745 CHURC1-FNTBB4DL54 471 aa5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 HTR3BO95264 441 aa5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 JUNBP17275 347 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 VAMP1P23763 118 aa5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 TNK2Q07912 1038 aa5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 ANGEL2Q5VTE6 544 aaKnown RBP5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 THAP5Q7Z6K1 395 aa5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 TMEM87AQ8NBN3 555 aa5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 PIWIL2Q8TC59 973 aaKnown RBP5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 PI4K2BQ8TCG2 481 aa5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 CYB5D2Q8WUJ1 264 aa5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 VWCEQ96DN2 955 aa5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 Q96M66 194 aa5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 BCL11AQ9H165 835 aa5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 EHMT1Q9H9B1 1298 aa5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 ADAMTS1Q9UHI8 967 aa5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 SUPT16HQ9Y5B9 1047 aaKnown RBP5.74□□□□□ -1.49
HMGB3P12-201ENST00000438745 DNAJA2O60884 412 aa5.73□□□□□ -1.49
HMGB3P12-201ENST00000438745 SRFP11831 508 aa5.73□□□□□ -1.49
HMGB3P12-201ENST00000438745 ETV3P41162 512 aa5.73□□□□□ -1.49
HMGB3P12-201ENST00000438745 TXKP42681 527 aa5.73□□□□□ -1.49
HMGB3P12-201ENST00000438745 YARSP54577 528 aaKnown RBP5.73□□□□□ -1.49
HMGB3P12-201ENST00000438745 ATG4DQ86TL0 474 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P12-201ENST00000438745 FAM13CQ8NE31 585 aa5.73□□□□□ -1.49
HMGB3P12-201ENST00000438745 METTL5Q9NRN9 209 aaKnown RBP5.73□□□□□ -1.49
HMGB3P12-201ENST00000438745 SLC22A31A6NKX4 558 aa5.72□□□□□ -1.49
HMGB3P12-201ENST00000438745 FAM155AB1AL88 458 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P12-201ENST00000438745 GRIN3BO60391 1043 aa5.72□□□□□ -1.49
HMGB3P12-201ENST00000438745 PAPLNO95428 1278 aa5.72□□□□□ -1.49
HMGB3P12-201ENST00000438745 CBX7O95931 251 aa5.72□□□□□ -1.49
HMGB3P12-201ENST00000438745 CRKP46108 304 aa5.72□□□□□ -1.49
HMGB3P12-201ENST00000438745 CWF19L2Q2TBE0 894 aaKnown RBP5.72□□□□□ -1.49
HMGB3P12-201ENST00000438745 SLITRK4Q8IW52 837 aa5.72□□□□□ -1.49
HMGB3P12-201ENST00000438745 REXO1Q8N1G1 1221 aaKnown RBP5.72□□□□□ -1.49
HMGB3P12-201ENST00000438745 NT5C1AQ9BXI3 368 aa5.72□□□□□ -1.49
HMGB3P12-201ENST00000438745 DUSP15Q9H1R2 295 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P12-201ENST00000438745 BRMS1Q9HCU9 246 aa5.72□□□□□ -1.49
HMGB3P12-201ENST00000438745 ATP13A1Q9HD20 1204 aa5.72□□□□□ -1.49
HMGB3P12-201ENST00000438745 FANCCQ00597 558 aa5.71□□□□□ -1.5
HMGB3P12-201ENST00000438745 ZP2Q05996 745 aa5.71□□□□□ -1.5
HMGB3P12-201ENST00000438745 CDKAL1Q5VV42 579 aa5.71□□□□□ -1.5
HMGB3P12-201ENST00000438745 LRRN4CLQ8ND94 238 aa5.71□□□□□ -1.5
HMGB3P12-201ENST00000438745 ASIC4Q96FT7 647 aa5.71□□□□□ -1.5
HMGB3P12-201ENST00000438745 EAF1Q96JC9 268 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P12-201ENST00000438745 CCDC74BQ96LY2 380 aa5.71□□□□□ -1.5
HMGB3P12-201ENST00000438745 GPR62Q9BZJ7 368 aa5.71□□□□□ -1.5
HMGB3P12-201ENST00000438745 CARMIL2Q6F5E8 1435 aa5.71□□□□□ -1.5
HMGB3P12-201ENST00000438745 RGS13O14921 159 aa5.7□□□□□ -1.5
HMGB3P12-201ENST00000438745 TLR3O15455 904 aaKnown RBP5.7□□□□□ -1.5
HMGB3P12-201ENST00000438745 IKZF1Q13422 519 aa5.7□□□□□ -1.5
HMGB3P12-201ENST00000438745 CDCP2Q5VXM1 449 aa5.7□□□□□ -1.5
HMGB3P12-201ENST00000438745 BAHD1Q8TBE0 780 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P12-201ENST00000438745 RNF141Q8WVD5 230 aa5.7□□□□□ -1.5
HMGB3P12-201ENST00000438745 UBE2FQ969M7 185 aa5.7□□□□□ -1.5
HMGB3P12-201ENST00000438745 RC3H2Q9HBD1 1191 aaKnown RBP5.7□□□□□ -1.5
HMGB3P12-201ENST00000438745 PCDHB14Q9Y5E9 798 aa5.7□□□□□ -1.5
HMGB3P12-201ENST00000438745 H3BS24 57 aa5.69□□□□□ -1.5
HMGB3P12-201ENST00000438745 BIN1O00499 593 aa5.69□□□□□ -1.5
HMGB3P12-201ENST00000438745 ESR1P03372 595 aa5.69□□□□□ -1.5
HMGB3P12-201ENST00000438745 ZNF76P36508 570 aa5.69□□□□□ -1.5
HMGB3P12-201ENST00000438745 GAB4Q2WGN9 574 aa5.69□□□□□ -1.5
HMGB3P12-201ENST00000438745 FLAD1Q8NFF5 587 aa5.69□□□□□ -1.5
HMGB3P12-201ENST00000438745 PRDM7Q9NQW5 492 aa5.69□□□□□ -1.5
HMGB3P12-201ENST00000438745 UBP1Q9NZI7 540 aa5.69□□□□□ -1.5
HMGB3P12-201ENST00000438745 ZSWIM5Q9P217 1185 aa5.69□□□□□ -1.5
HMGB3P12-201ENST00000438745 LRRN2O75325 713 aa5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 RECKO95980 971 aa5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 CLCQ05315 142 aa5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 TMPRSS7Q7RTY8 843 aa5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 DTWD2Q8NBA8 298 aa5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 RGS22Q8NE09 1264 aa5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 KREMEN1Q96MU8 473 aa5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 CNNM2Q9H8M5 875 aa5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 CARS2Q9HA77 564 aaKnown RBP5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 C19orf73Q9NVV2 129 aa5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 GMIPQ9P107 970 aa5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 KLHL3Q9UH77 587 aa5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 CTNND2Q9UQB3 1225 aa5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 CCDC9Q9Y3X0 531 aaKnown RBP5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P12-201ENST00000438745 WASH4PA8MWX3 477 aa5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 UBOX5O94941 541 aa5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 YBX3P16989 372 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 ZNF165P49910 485 aa5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 RACK1P63244 317 aaKnown RBP5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 APOBRQ0VD83 1088 aa5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 MLECQ14165 292 aa5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 SEZ6Q53EL9 994 aa5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 NKD1Q969G9 470 aa5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 RNF34Q969K3 372 aa5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 ATG4CQ96DT6 458 aa5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 KIF2CQ99661 725 aa5.67□□□□□ -1.5
HMGB3P12-201ENST00000438745 SPON2Q9BUD6 331 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms