RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 Q6ZUG5 572 aa11.44□□□□□ -0.58
CUBN-204ENST00000438254 CHST3Q7LGC8 479 aa11.44□□□□□ -0.58
CUBN-204ENST00000438254 FOXP4Q8IVH2 680 aaPredicted RBP11.44□□□□□ -0.58
CUBN-204ENST00000438254 TMEM87BQ96K49 555 aa11.44□□□□□ -0.58
CUBN-204ENST00000438254 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.44□□□□□ -0.58
CUBN-204ENST00000438254 MFRPQ9BY79 579 aa11.44□□□□□ -0.58
CUBN-204ENST00000438254 LRRC2Q9BYS8 371 aa11.44□□□□□ -0.58
CUBN-204ENST00000438254 TMEM39BQ9GZU3 492 aa11.44□□□□□ -0.58
CUBN-204ENST00000438254 GPHNQ9NQX3 736 aaPredicted RBP11.44□□□□□ -0.58
CUBN-204ENST00000438254 TCP11L1Q9NUJ3 509 aa11.44□□□□□ -0.58
CUBN-204ENST00000438254 SWAP70Q9UH65 585 aa11.44□□□□□ -0.58
CUBN-204ENST00000438254 TPCN1Q9ULQ1 816 aa11.44□□□□□ -0.58
CUBN-204ENST00000438254 IGKV6D-41A0A0C4DH26 115 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 TBC1D12O60347 775 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 SLC34A2O95436 690 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 LARGE1O95461 756 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
CUBN-204ENST00000438254 LIFRP42702 1097 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 ST3GAL1Q11201 340 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 TNFAIP1Q13829 316 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 RASA3Q14644 834 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 ANKRD1Q15327 319 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 ANGEL2Q5VTE6 544 aaKnown RBP11.43□□□□□ -0.58
CUBN-204ENST00000438254 RCSD1Q6JBY9 416 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 USP50Q70EL3 339 aaPredicted RBP11.43□□□□□ -0.58
CUBN-204ENST00000438254 SGMS1Q86VZ5 419 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 APOBEC3FQ8IUX4 373 aaKnown RBP11.43□□□□□ -0.58
CUBN-204ENST00000438254 STK11IPQ8N1F8 1099 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 NEDD1Q8NHV4 660 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 ANKS1AQ92625 1134 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 TAF1DQ9H5J8 278 aaPredicted RBP11.43□□□□□ -0.58
CUBN-204ENST00000438254 LY9Q9HBG7 655 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 VEZTQ9HBM0 779 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 SENP2Q9HC62 589 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 IL17RBQ9NRM6 502 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 HERC5Q9UII4 1024 aaKnown RBP11.43□□□□□ -0.58
CUBN-204ENST00000438254 LIMCH1Q9UPQ0 1083 aa11.43□□□□□ -0.58
CUBN-204ENST00000438254 NID2Q14112 1375 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 C2orf72A6NCS6 295 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 EPHX2P34913 555 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 TNNI2P48788 182 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 ME3Q16798 604 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 RRP12Q5JTH9 1297 aaKnown RBP11.42□□□□□ -0.58
CUBN-204ENST00000438254 HSCBQ8IWL3 235 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 ZC3H15Q8WU90 426 aaKnown RBP11.42□□□□□ -0.58
CUBN-204ENST00000438254 BRF1Q92994 677 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 TMX3Q96JJ7 454 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 CSRNP1Q96S65 589 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 DEFB129Q9H1M3 183 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 ZNF287Q9HBT7 754 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 GGA3Q9NZ52 723 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 BRPF3Q9ULD4 1205 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 ANGEL1Q9UNK9 670 aaKnown RBP11.42□□□□□ -0.58
CUBN-204ENST00000438254 PPP2R3BQ9Y5P8 575 aa11.42□□□□□ -0.58
CUBN-204ENST00000438254 SSC5DA1L4H1 1573 aa11.41□□□□□ -0.58
CUBN-204ENST00000438254 TNKSO95271 1327 aa11.41□□□□□ -0.58
CUBN-204ENST00000438254 IQCA1LA6NCM1 817 aa11.41□□□□□ -0.58
CUBN-204ENST00000438254 FAM196BA6NMK8 535 aa11.41□□□□□ -0.58
CUBN-204ENST00000438254 RANBP6O60518 1105 aaKnown RBP11.41□□□□□ -0.58
CUBN-204ENST00000438254 AKR1B1P15121 316 aa11.41□□□□□ -0.58
CUBN-204ENST00000438254 TFAP4Q01664 338 aa11.41□□□□□ -0.58
CUBN-204ENST00000438254 BECN1Q14457 450 aa11.41□□□□□ -0.58
CUBN-204ENST00000438254 RRP1BQ14684 758 aaKnown RBP11.41□□□□□ -0.58
CUBN-204ENST00000438254 FAM47AQ5JRC9 791 aa11.41□□□□□ -0.58
CUBN-204ENST00000438254 ENAHQ8N8S7 591 aaPredicted RBP11.41□□□□□ -0.58
CUBN-204ENST00000438254 ZSCAN10Q96SZ4 725 aaPredicted RBP11.41□□□□□ -0.58
CUBN-204ENST00000438254 LARP6Q9BRS8 491 aaKnown RBP11.41□□□□□ -0.58
CUBN-204ENST00000438254 MKNK2Q9HBH9 465 aa11.41□□□□□ -0.58
CUBN-204ENST00000438254 SCAF8Q9UPN6 1271 aaKnown RBP11.41□□□□□ -0.58
CUBN-204ENST00000438254 HPS5Q9UPZ3 1129 aa11.41□□□□□ -0.58
CUBN-204ENST00000438254 PAPPA2Q9BXP8 1791 aa11.41□□□□□ -0.58
CUBN-204ENST00000438254 MYH8P13535 1937 aa11.41□□□□□ -0.58
CUBN-204ENST00000438254 TSPY2A6NKD2 308 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 PHF20L1A8MW92 1017 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 STK25O00506 426 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 IFIT3O14879 490 aaKnown RBP11.4□□□□□ -0.58
CUBN-204ENST00000438254 NMT2O60551 498 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 NUDT7P0C024 238 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 GUCY1A2P33402 732 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 SLC4A3P48751 1232 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 JAG1P78504 1218 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 APOBRQ0VD83 1088 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 TMEM67Q5HYA8 995 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 DGKHQ86XP1 1220 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 ZSCAN29Q8IWY8 852 aaPredicted RBP11.4□□□□□ -0.58
CUBN-204ENST00000438254 ZNF444Q8N0Y2 327 aaPredicted RBP11.4□□□□□ -0.58
CUBN-204ENST00000438254 ZNF274Q96GC6 653 aaPredicted RBP11.4□□□□□ -0.58
CUBN-204ENST00000438254 ZSCAN31Q96LW9 406 aaPredicted RBP11.4□□□□□ -0.58
CUBN-204ENST00000438254 CCDC17Q96LX7 622 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 ZKSCAN3Q9BRR0 538 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 SH2B1Q9NRF2 756 aaPredicted RBP11.4□□□□□ -0.58
CUBN-204ENST00000438254 TOMM22Q9NS69 142 aa11.4□□□□□ -0.58
CUBN-204ENST00000438254 PFKFB2O60825 505 aa11.39□□□□□ -0.59
CUBN-204ENST00000438254 TSPY3P0CV98 308 aa11.39□□□□□ -0.59
CUBN-204ENST00000438254 TSPY8P0CW00 308 aa11.39□□□□□ -0.59
CUBN-204ENST00000438254 PDIA3P30101 505 aaKnown RBP11.39□□□□□ -0.59
CUBN-204ENST00000438254 DDIT3P35638 169 aa11.39□□□□□ -0.59
CUBN-204ENST00000438254 RCAN1P53805 252 aa11.39□□□□□ -0.59
CUBN-204ENST00000438254 SHROOM1Q2M3G4 852 aaPredicted RBP11.39□□□□□ -0.59
CUBN-204ENST00000438254 NBPF12Q5TAG4 269 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms