RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 AKR1B1P15121 316 aa19.48■□□□□ 0.71
CTSD-205ENST00000438213 GUCY1A2P33402 732 aa19.48■□□□□ 0.71
CTSD-205ENST00000438213 KIAA1683Q9H0B3 1180 aa19.48■□□□□ 0.71
CTSD-205ENST00000438213 KANSL2Q9H9L4 492 aa19.48■□□□□ 0.71
CTSD-205ENST00000438213 PNMA3Q9UL41 463 aa19.48■□□□□ 0.71
CTSD-205ENST00000438213 ATAD5Q96QE3 1844 aa19.48■□□□□ 0.71
CTSD-205ENST00000438213 ROBO3Q96MS0 1386 aa19.47■□□□□ 0.71
CTSD-205ENST00000438213 CASP8AP2Q9UKL3 1982 aa19.47■□□□□ 0.71
CTSD-205ENST00000438213 FOXP2O15409 715 aa19.47■□□□□ 0.71
CTSD-205ENST00000438213 RASA1P20936 1047 aa19.47■□□□□ 0.71
CTSD-205ENST00000438213 OSBPP22059 807 aa19.47■□□□□ 0.71
CTSD-205ENST00000438213 CHMLP26374 656 aa19.47■□□□□ 0.71
CTSD-205ENST00000438213 SP3Q02447 781 aa19.47■□□□□ 0.71
CTSD-205ENST00000438213 ARHGEF6Q15052 776 aa19.47■□□□□ 0.71
CTSD-205ENST00000438213 ARHGEF10LQ9HCE6 1279 aa19.47■□□□□ 0.71
CTSD-205ENST00000438213 ANAPC4Q9UJX5 808 aa19.47■□□□□ 0.71
CTSD-205ENST00000438213 PHIPQ8WWQ0 1821 aa19.46■□□□□ 0.71
CTSD-205ENST00000438213 TREML2Q5T2D2 321 aa19.46■□□□□ 0.71
CTSD-205ENST00000438213 ACER1Q8TDN7 264 aa19.46■□□□□ 0.71
CTSD-205ENST00000438213 ERO1AQ96HE7 468 aa19.46■□□□□ 0.71
CTSD-205ENST00000438213 SH2D4AQ9H788 454 aa19.46■□□□□ 0.71
CTSD-205ENST00000438213 EMILIN3Q9NT22 766 aa19.46■□□□□ 0.71
CTSD-205ENST00000438213 ZMYM6O95789 1325 aa19.46■□□□□ 0.71
CTSD-205ENST00000438213 CYP2C8P10632 490 aa19.45■□□□□ 0.7
CTSD-205ENST00000438213 HOXA7P31268 230 aaPredicted RBP19.45■□□□□ 0.7
CTSD-205ENST00000438213 ICA1Q05084 483 aa19.45■□□□□ 0.7
CTSD-205ENST00000438213 TNS4Q8IZW8 715 aa19.45■□□□□ 0.7
CTSD-205ENST00000438213 SMCR8Q8TEV9 937 aaPredicted RBP19.45■□□□□ 0.7
CTSD-205ENST00000438213 DSCC1Q9BVC3 393 aa19.45■□□□□ 0.7
CTSD-205ENST00000438213 CTNNA3Q9UI47 895 aa19.45■□□□□ 0.7
CTSD-205ENST00000438213 PRDM1O75626 825 aa19.44■□□□□ 0.7
CTSD-205ENST00000438213 IRX3P78415 501 aaPredicted RBP19.44■□□□□ 0.7
CTSD-205ENST00000438213 CTDSPL2Q05D32 466 aa19.44■□□□□ 0.7
CTSD-205ENST00000438213 KIF22Q14807 665 aa19.44■□□□□ 0.7
CTSD-205ENST00000438213 ZYXQ15942 572 aaKnown RBP19.44■□□□□ 0.7
CTSD-205ENST00000438213 BMP2KLQ5H9B9 411 aa19.44■□□□□ 0.7
CTSD-205ENST00000438213 C17orf99Q6UX52 265 aa19.44■□□□□ 0.7
CTSD-205ENST00000438213 CTU1Q7Z7A3 348 aaKnown RBP19.44■□□□□ 0.7
CTSD-205ENST00000438213 C12orf42Q96LP6 360 aa19.44■□□□□ 0.7
CTSD-205ENST00000438213 RAD50Q92878 1312 aa19.44■□□□□ 0.7
CTSD-205ENST00000438213 TSPY3P0CV98 308 aa19.43■□□□□ 0.7
CTSD-205ENST00000438213 TSPY8P0CW00 308 aa19.43■□□□□ 0.7
CTSD-205ENST00000438213 ATP2B2Q01814 1243 aa19.43■□□□□ 0.7
CTSD-205ENST00000438213 DGKZQ13574 1117 aa19.43■□□□□ 0.7
CTSD-205ENST00000438213 ASCC2Q9H1I8 757 aaPredicted RBP19.43■□□□□ 0.7
CTSD-205ENST00000438213 CPA4Q9UI42 421 aa19.43■□□□□ 0.7
CTSD-205ENST00000438213 TMX2Q9Y320 296 aa19.43■□□□□ 0.7
CTSD-205ENST00000438213 A0A1W2PRG0 241 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 USP17L15C9J2P7 530 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 USP17L13C9JLJ4 530 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 USP17L11C9JVI0 530 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 USP17L18D6R9N7 530 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 USP17L22D6RA61 530 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 USP17L17D6RBQ6 530 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 USP17L19D6RCP7 530 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 USP17L20D6RJB6 530 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 ZNF213O14771 459 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 EEF2P13639 858 aaKnown RBP19.42■□□□□ 0.7
CTSD-205ENST00000438213 GCLCP48506 637 aaPredicted RBP19.42■□□□□ 0.7
CTSD-205ENST00000438213 TFAP4Q01664 338 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 USP17L24Q0WX57 530 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 PKN2Q16513 984 aaKnown RBP19.42■□□□□ 0.7
CTSD-205ENST00000438213 PPP4R3BQ5MIZ7 849 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 SIAH1Q8IUQ4 282 aa19.42■□□□□ 0.7
CTSD-205ENST00000438213 PTPRFP10586 1907 aa19.41■□□□□ 0.7
CTSD-205ENST00000438213 PCP11498 1178 aaKnown RBP19.41■□□□□ 0.7
CTSD-205ENST00000438213 MFSD6Q6ZSS7 791 aa19.41■□□□□ 0.7
CTSD-205ENST00000438213 SKAP1Q86WV1 359 aa19.41■□□□□ 0.7
CTSD-205ENST00000438213 NEDD1Q8NHV4 660 aa19.41■□□□□ 0.7
CTSD-205ENST00000438213 LPAR1Q92633 364 aa19.41■□□□□ 0.7
CTSD-205ENST00000438213 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.41■□□□□ 0.7
CTSD-205ENST00000438213 RNF41Q9H4P4 317 aaPredicted RBP19.41■□□□□ 0.7
CTSD-205ENST00000438213 TOMM22Q9NS69 142 aa19.41■□□□□ 0.7
CTSD-205ENST00000438213 NYAP2Q9P242 653 aa19.41■□□□□ 0.7
CTSD-205ENST00000438213 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.41■□□□□ 0.7
CTSD-205ENST00000438213 MYH8P13535 1937 aa19.41■□□□□ 0.7
CTSD-205ENST00000438213 TSPY2A6NKD2 308 aa19.4■□□□□ 0.7
CTSD-205ENST00000438213 ORC4O43929 436 aa19.4■□□□□ 0.7
CTSD-205ENST00000438213 RANBP6O60518 1105 aaKnown RBP19.4■□□□□ 0.7
CTSD-205ENST00000438213 FGRP09769 529 aa19.4■□□□□ 0.7
CTSD-205ENST00000438213 HAND2P61296 217 aa19.4■□□□□ 0.7
CTSD-205ENST00000438213 IMMTQ16891 758 aaKnown RBP19.4■□□□□ 0.7
CTSD-205ENST00000438213 FAM47AQ5JRC9 791 aa19.4■□□□□ 0.7
CTSD-205ENST00000438213 CD99L2Q8TCZ2 262 aa19.4■□□□□ 0.7
CTSD-205ENST00000438213 P2RX7Q99572 595 aaKnown RBP19.4■□□□□ 0.7
CTSD-205ENST00000438213 EFCC1Q9HA90 598 aa19.4■□□□□ 0.7
CTSD-205ENST00000438213 GOPCQ9HD26 462 aa19.4■□□□□ 0.7
CTSD-205ENST00000438213 ADGRA2Q96PE1 1338 aa19.4■□□□□ 0.7
CTSD-205ENST00000438213 SGSM2O43147 1006 aa19.39■□□□□ 0.69
CTSD-205ENST00000438213 BCRP11274 1271 aa19.39■□□□□ 0.69
CTSD-205ENST00000438213 VCAM1P19320 739 aa19.39■□□□□ 0.69
CTSD-205ENST00000438213 LACTBP83111 547 aaPredicted RBP19.39■□□□□ 0.69
CTSD-205ENST00000438213 AKNAD1Q5T1N1 836 aa19.39■□□□□ 0.69
CTSD-205ENST00000438213 CATSPERGQ6ZRH7 1159 aa19.39■□□□□ 0.69
CTSD-205ENST00000438213 KIAA1211Q6ZU35 1233 aa19.39■□□□□ 0.69
CTSD-205ENST00000438213 CLEC10AQ8IUN9 316 aa19.39■□□□□ 0.69
CTSD-205ENST00000438213 GTF3C2Q8WUA4 911 aaPredicted RBP19.39■□□□□ 0.69
CTSD-205ENST00000438213 VCPKMTQ9H867 229 aa19.39■□□□□ 0.69
CTSD-205ENST00000438213 INCENPQ9NQS7 918 aa19.39■□□□□ 0.69
CTSD-205ENST00000438213 MTMR4Q9NYA4 1195 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms