RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 CAP2P40123 477 aa15.42■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 KCNQ1P51787 676 aa15.42■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 PUM3Q15397 648 aaKnown RBP15.42■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 TMEM31Q5JXX7 168 aa15.42■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 NPLOC4Q8TAT6 608 aa15.42■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 PBX4Q9BYU1 374 aa15.42■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 C11orf16Q9NQ32 467 aa15.42■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 MYH13Q9UKX3 1938 aa15.42■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 GAKO14976 1311 aa15.42■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 FAM86C2PA6NEL3 165 aa15.41■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 KBTBD13C9JR72 458 aa15.41■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 NBPF7P0C2Y1 421 aaPredicted RBP15.41■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 BACE1P56817 501 aa15.41■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 JAG1P78504 1218 aa15.41■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 ATP2B2Q01814 1243 aa15.41■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 ARRDC4Q8NCT1 418 aa15.41■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 KHSRPQ92945 711 aaKnown RBP eCLIP15.41■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 BICC1Q9H694 974 aaKnown RBP15.41■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 MYBBP1AQ9BQG0 1328 aaKnown RBP15.41■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 ATAD5Q96QE3 1844 aa15.4■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 CNMDO75829 334 aa15.4■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 CYBAP13498 195 aa15.4■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 FPGSQ05932 587 aa15.4■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 SHROOM1Q2M3G4 852 aaPredicted RBP15.4■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 ANKRD44Q8N8A2 993 aa15.4■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 TBC1D2Q9BYX2 928 aa15.4■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 CWC22Q9HCG8 908 aaKnown RBP15.4■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 TMOD4Q9NZQ9 345 aa15.4■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 CXXC1Q9P0U4 656 aaPredicted RBP15.4■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 TACC3Q9Y6A5 838 aa15.4■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 MYH2Q9UKX2 1941 aa15.4■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 IGHA2P01877 340 aa15.39■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 CLTBP09497 229 aa15.39■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 RAG1P15918 1043 aa15.39■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 BTDP43251 543 aa15.39■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 WDR78Q5VTH9 848 aa15.39■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 CCDC129Q6ZRS4 1044 aa15.39■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 WDR18Q9BV38 432 aa15.39■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 AS3MTQ9HBK9 375 aa15.39■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 PLXNA1Q9UIW2 1896 aa15.39■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 KIAA0355O15063 1070 aa15.38■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 SLC5A1P13866 664 aa15.38■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 PTPREP23469 700 aa15.38■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 RHBDL3P58872 404 aa15.38■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 LRRC41Q15345 812 aa15.38■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 RABL6Q3YEC7 729 aaPredicted RBP15.38■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 C1orf53Q5VUE5 145 aa15.38■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 LPIN2Q92539 896 aa15.38■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 SALL1Q9NSC2 1324 aa15.38■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 SLC15A5A6NIM6 579 aa15.37■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 HOXC6P09630 235 aa15.37■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 MRE11P49959 708 aa15.37■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 SLC4A10Q6U841 1118 aa15.37■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 C16orf59Q7L2K0 433 aa15.37■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 CHD7Q9P2D1 2997 aa15.37■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 PQBP1O60828 265 aaKnown RBP15.36■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 VAMP4O75379 141 aa15.36■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 ALDH1L1O75891 902 aa15.36■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 PRAMEF19Q5SWL8 479 aa15.36■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 MICALL1Q8N3F8 863 aa15.36■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 PIP4P2Q8N4L2 257 aa15.36■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 GPR37L1O60883 481 aa15.35■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 GLRX3O76003 335 aaKnown RBP15.35■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 PHKA1P46020 1223 aa15.35■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 GRB14Q14449 540 aa15.35■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 FAM47AQ5JRC9 791 aa15.35■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 DZIP1Q86YF9 867 aaKnown RBP15.35■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 FAM163AQ96GL9 167 aaPredicted RBP15.35■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 EMILIN3Q9NT22 766 aa15.35■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 TMEM39AQ9NV64 488 aa15.35■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 SEPT4O43236 478 aa15.34■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 TMEM240Q5SV17 173 aa15.34■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 ZNF384Q8TF68 577 aa15.34■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 SRCIN1Q9C0H9 1055 aa15.34■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 NKX2-4Q9H2Z4 354 aa15.34■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 ABCF2Q9UG63 623 aa15.34■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 RABGAP1Q9Y3P9 1069 aa15.34■□□□□ 0.05
SMAD9-IT1-201ENST00000437983 GPR75-ASB3A0A0A6YYF3 556 aa15.33■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 C19orf81C9J6K1 198 aa15.33■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 USP17L10C9JJH3 530 aa15.33■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 FAAP100Q0VG06 881 aa15.33■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 RASIP1Q5U651 963 aa15.33■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 GTF3C2Q8WUA4 911 aaPredicted RBP15.33■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 BTBD7Q9P203 1132 aa15.33■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 DENND2AQ9ULE3 1009 aa15.33■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 PHF24Q9UPV7 400 aa15.33■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 MROH7-TTC4A0A0A0MT08 1334 aa15.33■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 EYA2O00167 538 aa15.32■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 GDF11O95390 407 aa15.32■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 ATG9AQ7Z3C6 839 aa15.32■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 SLC44A5Q8NCS7 719 aa15.32■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 GNL3LQ9NVN8 582 aaKnown RBP15.32■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 YBX2Q9Y2T7 364 aaKnown RBP15.32■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 CACNA1FO60840 1977 aa15.32■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 ACRP10323 421 aa15.31■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 RFX5P48382 616 aaPredicted RBP15.31■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 CCNA1P78396 465 aa15.31■□□□□ 0.04
SMAD9-IT1-201ENST00000437983 MECOMQ03112 1051 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms