RNA–Protein interactions for RNA: ENST00000437316.6

HLA-DQB2-232, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB2, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-232ENST00000437316 NMIQ13287 307 aaPredicted RBP17.04■□□□□ 0.32
HLA-DQB2-232ENST00000437316 ZYXQ15942 572 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB2-232ENST00000437316 TTC22Q5TAA0 569 aa17.04■□□□□ 0.32
HLA-DQB2-232ENST00000437316 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
HLA-DQB2-232ENST00000437316 CD99L2Q8TCZ2 262 aa17.04■□□□□ 0.32
HLA-DQB2-232ENST00000437316 CCDC136Q96JN2 1154 aa17.04■□□□□ 0.32
HLA-DQB2-232ENST00000437316 FAM227BQ96M60 508 aa17.04■□□□□ 0.32
HLA-DQB2-232ENST00000437316 KIAA1683Q9H0B3 1180 aa17.04■□□□□ 0.32
HLA-DQB2-232ENST00000437316 CPA4Q9UI42 421 aa17.04■□□□□ 0.32
HLA-DQB2-232ENST00000437316 TRIM17Q9Y577 477 aa17.04■□□□□ 0.32
HLA-DQB2-232ENST00000437316 A0A0D9SFI3 127 aa17.03■□□□□ 0.32
HLA-DQB2-232ENST00000437316 CYP2C8P10632 490 aa17.03■□□□□ 0.32
HLA-DQB2-232ENST00000437316 GCLCP48506 637 aaPredicted RBP17.03■□□□□ 0.32
HLA-DQB2-232ENST00000437316 JAG1P78504 1218 aa17.03■□□□□ 0.32
HLA-DQB2-232ENST00000437316 SHROOM1Q2M3G4 852 aaPredicted RBP17.03■□□□□ 0.32
HLA-DQB2-232ENST00000437316 TREML2Q5T2D2 321 aa17.03■□□□□ 0.32
HLA-DQB2-232ENST00000437316 ZNF444Q8N0Y2 327 aaPredicted RBP17.03■□□□□ 0.32
HLA-DQB2-232ENST00000437316 GTF3C2Q8WUA4 911 aaPredicted RBP17.03■□□□□ 0.32
HLA-DQB2-232ENST00000437316 ABHD8Q96I13 439 aa17.03■□□□□ 0.32
HLA-DQB2-232ENST00000437316 KANSL2Q9H9L4 492 aa17.03■□□□□ 0.32
HLA-DQB2-232ENST00000437316 GNRH1P01148 92 aa17.02■□□□□ 0.32
HLA-DQB2-232ENST00000437316 AKR1B1P15121 316 aa17.02■□□□□ 0.32
HLA-DQB2-232ENST00000437316 PDE4AP27815 886 aa17.02■□□□□ 0.32
HLA-DQB2-232ENST00000437316 LACTBP83111 547 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB2-232ENST00000437316 EVX2Q03828 476 aa17.02■□□□□ 0.32
HLA-DQB2-232ENST00000437316 PPARAQ07869 468 aa17.02■□□□□ 0.32
HLA-DQB2-232ENST00000437316 FBXO46Q6PJ61 603 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB2-232ENST00000437316 STK11IPQ8N1F8 1099 aa17.02■□□□□ 0.32
HLA-DQB2-232ENST00000437316 RUFY2Q8WXA3 655 aa17.02■□□□□ 0.32
HLA-DQB2-232ENST00000437316 HOXD10P28358 340 aa17.01■□□□□ 0.31
HLA-DQB2-232ENST00000437316 ATP2B2Q01814 1243 aa17.01■□□□□ 0.31
HLA-DQB2-232ENST00000437316 PPP4R3BQ5MIZ7 849 aa17.01■□□□□ 0.31
HLA-DQB2-232ENST00000437316 CWC27Q6UX04 472 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB2-232ENST00000437316 C17orf99Q6UX52 265 aa17.01■□□□□ 0.31
HLA-DQB2-232ENST00000437316 OTOP1Q7RTM1 612 aa17.01■□□□□ 0.31
HLA-DQB2-232ENST00000437316 C12orf42Q96LP6 360 aa17.01■□□□□ 0.31
HLA-DQB2-232ENST00000437316 ASCC2Q9H1I8 757 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB2-232ENST00000437316 ADGRA2Q96PE1 1338 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 USP17L15C9J2P7 530 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 USP17L13C9JLJ4 530 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 USP17L11C9JVI0 530 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 USP17L18D6R9N7 530 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 USP17L22D6RA61 530 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 USP17L17D6RBQ6 530 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 USP17L19D6RCP7 530 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 USP17L20D6RJB6 530 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 FMNL1O95466 1100 aaPredicted RBP17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 HOXA7P31268 230 aaPredicted RBP17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 FCGRTP55899 365 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 USP17L24Q0WX57 530 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 ALX1Q15699 326 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 IFFO2Q5TF58 517 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 ACER1Q8TDN7 264 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 LPAR1Q92633 364 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 GOPCQ9HD26 462 aa17■□□□□ 0.31
HLA-DQB2-232ENST00000437316 ZMYM6O95789 1325 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 RAD50Q92878 1312 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 CAPN15O75808 1086 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 TSPY3P0CV98 308 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 TSPY8P0CW00 308 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 RASA1P20936 1047 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 GUCY1A2P33402 732 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 PSMC4P43686 418 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 PRMT2P55345 433 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 FAM110CQ1W6H9 321 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 CCAR1Q8IX12 1150 aaKnown RBP16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 ANKRD13CQ8N6S4 541 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 TANGO6Q9C0B7 1094 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 TOMM22Q9NS69 142 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 EMILIN3Q9NT22 766 aa16.99■□□□□ 0.31
HLA-DQB2-232ENST00000437316 RAD21O60216 631 aa16.98■□□□□ 0.31
HLA-DQB2-232ENST00000437316 PRDM1O75626 825 aa16.98■□□□□ 0.31
HLA-DQB2-232ENST00000437316 HSPD1P10809 573 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB2-232ENST00000437316 BCRP11274 1271 aa16.98■□□□□ 0.31
HLA-DQB2-232ENST00000437316 VCAM1P19320 739 aa16.98■□□□□ 0.31
HLA-DQB2-232ENST00000437316 VPS53Q5VIR6 699 aa16.98■□□□□ 0.31
HLA-DQB2-232ENST00000437316 ZNF589Q86UQ0 364 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB2-232ENST00000437316 CTNNA3Q9UI47 895 aa16.98■□□□□ 0.31
HLA-DQB2-232ENST00000437316 CCDC85CA6NKD9 419 aa16.97■□□□□ 0.31
HLA-DQB2-232ENST00000437316 GSPT1P15170 499 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB2-232ENST00000437316 HERVK_113P62684 666 aa16.97■□□□□ 0.31
HLA-DQB2-232ENST00000437316 RNF41Q9H4P4 317 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB2-232ENST00000437316 RPAP3Q9H6T3 665 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB2-232ENST00000437316 CWC22Q9HCG8 908 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB2-232ENST00000437316 TMX2Q9Y320 296 aa16.97■□□□□ 0.31
HLA-DQB2-232ENST00000437316 TSPY2A6NKD2 308 aa16.96■□□□□ 0.31
HLA-DQB2-232ENST00000437316 SMIM22K7EJ46 135 aa16.96■□□□□ 0.31
HLA-DQB2-232ENST00000437316 TNPO2O14787 897 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB2-232ENST00000437316 PCP11498 1178 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB2-232ENST00000437316 EEF2P13639 858 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB2-232ENST00000437316 COA7Q96BR5 231 aa16.96■□□□□ 0.31
HLA-DQB2-232ENST00000437316 VCPKMTQ9H867 229 aa16.96■□□□□ 0.31
HLA-DQB2-232ENST00000437316 ANAPC4Q9UJX5 808 aa16.96■□□□□ 0.31
HLA-DQB2-232ENST00000437316 PTPN22Q9Y2R2 807 aa16.96■□□□□ 0.31
HLA-DQB2-232ENST00000437316 PLIN4Q96Q06 1357 aa16.95■□□□□ 0.3
HLA-DQB2-232ENST00000437316 WDR46O15213 610 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB2-232ENST00000437316 RANBP6O60518 1105 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB2-232ENST00000437316 ECM2O94769 699 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQB2-232ENST00000437316 FGAP02671 866 aa16.95■□□□□ 0.3
HLA-DQB2-232ENST00000437316 CCNA1P78396 465 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms