RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 MRPS5P82675 430 aaKnown RBP20.29■□□□□ 0.84
HMGN1P19-201ENST00000436976 WDR63Q8IWG1 891 aa20.29■□□□□ 0.84
HMGN1P19-201ENST00000436976 TIFAQ96CG3 184 aa20.29■□□□□ 0.84
HMGN1P19-201ENST00000436976 NECAB3Q96P71 396 aaPredicted RBP20.29■□□□□ 0.84
HMGN1P19-201ENST00000436976 GLRX3O76003 335 aaKnown RBP20.28■□□□□ 0.84
HMGN1P19-201ENST00000436976 CIAO1O76071 339 aa20.28■□□□□ 0.84
HMGN1P19-201ENST00000436976 GDF11O95390 407 aa20.28■□□□□ 0.84
HMGN1P19-201ENST00000436976 AKNAD1Q5T1N1 836 aa20.28■□□□□ 0.84
HMGN1P19-201ENST00000436976 SPTY2D1Q68D10 685 aaPredicted RBP20.28■□□□□ 0.84
HMGN1P19-201ENST00000436976 ERICH6Q7L0X2 663 aa20.28■□□□□ 0.84
HMGN1P19-201ENST00000436976 NSUN4Q96CB9 384 aaKnown RBP20.28■□□□□ 0.84
HMGN1P19-201ENST00000436976 PI4KBQ9UBF8 816 aa20.28■□□□□ 0.84
HMGN1P19-201ENST00000436976 SALL2Q9Y467 1007 aaPredicted RBP20.28■□□□□ 0.84
HMGN1P19-201ENST00000436976 MYCNP04198 464 aaPredicted RBP20.27■□□□□ 0.84
HMGN1P19-201ENST00000436976 CCNA1P78396 465 aa20.27■□□□□ 0.84
HMGN1P19-201ENST00000436976 ADGRE1Q14246 886 aa20.27■□□□□ 0.84
HMGN1P19-201ENST00000436976 LRRC41Q15345 812 aa20.27■□□□□ 0.84
HMGN1P19-201ENST00000436976 GAS2L1Q99501 681 aaPredicted RBP20.27■□□□□ 0.84
HMGN1P19-201ENST00000436976 PRDM12Q9H4Q4 367 aa20.27■□□□□ 0.84
HMGN1P19-201ENST00000436976 BTBD7Q9P203 1132 aa20.27■□□□□ 0.84
HMGN1P19-201ENST00000436976 FBXO3Q9UK99 471 aa20.27■□□□□ 0.84
HMGN1P19-201ENST00000436976 ZBTB21Q9ULJ3 1066 aa20.27■□□□□ 0.84
HMGN1P19-201ENST00000436976 TACC3Q9Y6A5 838 aa20.27■□□□□ 0.84
HMGN1P19-201ENST00000436976 KIAA0355O15063 1070 aa20.26■□□□□ 0.83
HMGN1P19-201ENST00000436976 SEPT4O43236 478 aa20.26■□□□□ 0.83
HMGN1P19-201ENST00000436976 MAP4K4O95819 1239 aaPredicted RBP20.26■□□□□ 0.83
HMGN1P19-201ENST00000436976 CLTBP09497 229 aa20.26■□□□□ 0.83
HMGN1P19-201ENST00000436976 PBX2P40425 430 aa20.26■□□□□ 0.83
HMGN1P19-201ENST00000436976 TEX11Q8IYF3 940 aa20.26■□□□□ 0.83
HMGN1P19-201ENST00000436976 A0A0G2JMZ2 1700 aa20.26■□□□□ 0.83
HMGN1P19-201ENST00000436976 TIMM10P62072 90 aa20.25■□□□□ 0.83
HMGN1P19-201ENST00000436976 FPGSQ05932 587 aa20.25■□□□□ 0.83
HMGN1P19-201ENST00000436976 CCDC85BQ15834 202 aaPredicted RBP20.25■□□□□ 0.83
HMGN1P19-201ENST00000436976 USP17L2Q6R6M4 530 aa20.25■□□□□ 0.83
HMGN1P19-201ENST00000436976 METTL16Q86W50 562 aaKnown RBP20.25■□□□□ 0.83
HMGN1P19-201ENST00000436976 SH3RF3Q8TEJ3 882 aaPredicted RBP20.25■□□□□ 0.83
HMGN1P19-201ENST00000436976 C1QTNF1Q9BXJ1 281 aa20.25■□□□□ 0.83
HMGN1P19-201ENST00000436976 TRANK1O15050 2925 aa20.25■□□□□ 0.83
HMGN1P19-201ENST00000436976 RAG1P15918 1043 aa20.24■□□□□ 0.83
HMGN1P19-201ENST00000436976 FAM47AQ5JRC9 791 aa20.24■□□□□ 0.83
HMGN1P19-201ENST00000436976 PI16Q6UXB8 463 aa20.24■□□□□ 0.83
HMGN1P19-201ENST00000436976 TBC1D9Q6ZT07 1266 aa20.24■□□□□ 0.83
HMGN1P19-201ENST00000436976 C12orf42Q96LP6 360 aa20.24■□□□□ 0.83
HMGN1P19-201ENST00000436976 PBX4Q9BYU1 374 aa20.24■□□□□ 0.83
HMGN1P19-201ENST00000436976 PA2G4Q9UQ80 394 aaKnown RBP20.24■□□□□ 0.83
HMGN1P19-201ENST00000436976 ARIH1Q9Y4X5 557 aaPredicted RBP20.24■□□□□ 0.83
HMGN1P19-201ENST00000436976 IVNS1ABPQ9Y6Y0 642 aa20.24■□□□□ 0.83
HMGN1P19-201ENST00000436976 PARP14Q460N5 1801 aa20.23■□□□□ 0.83
HMGN1P19-201ENST00000436976 GRXCR1A8MXD5 290 aa20.23■□□□□ 0.83
HMGN1P19-201ENST00000436976 PRAMEF19Q5SWL8 479 aa20.23■□□□□ 0.83
HMGN1P19-201ENST00000436976 OLFML2BQ68BL8 750 aa20.23■□□□□ 0.83
HMGN1P19-201ENST00000436976 LBX2Q6XYB7 198 aa20.23■□□□□ 0.83
HMGN1P19-201ENST00000436976 CATSPERGQ6ZRH7 1159 aa20.23■□□□□ 0.83
HMGN1P19-201ENST00000436976 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.23■□□□□ 0.83
HMGN1P19-201ENST00000436976 DHX36Q9H2U1 1008 aaKnown RBP20.23■□□□□ 0.83
HMGN1P19-201ENST00000436976 PHF24Q9UPV7 400 aa20.23■□□□□ 0.83
HMGN1P19-201ENST00000436976 USP17L15C9J2P7 530 aa20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 USP17L13C9JLJ4 530 aa20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 USP17L11C9JVI0 530 aa20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 USP17L18D6R9N7 530 aa20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 USP17L22D6RA61 530 aa20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 USP17L17D6RBQ6 530 aa20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 USP17L19D6RCP7 530 aa20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 USP17L20D6RJB6 530 aa20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 LDHCP07864 332 aa20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 IL15P40933 162 aaPredicted RBP20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 USP17L24Q0WX57 530 aa20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 ZYXQ15942 572 aaKnown RBP20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 MRPL50Q8N5N7 158 aaKnown RBP20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 LRFN3Q9BTN0 628 aa20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 GINM1Q9NU53 330 aa20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 HMG20BQ9P0W2 317 aa20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 PRRC2BQ5JSZ5 2229 aaKnown RBP20.22■□□□□ 0.83
HMGN1P19-201ENST00000436976 COL11A1P12107 1806 aaPredicted RBP20.21■□□□□ 0.83
HMGN1P19-201ENST00000436976 SPDYE16A6NNV3 312 aaPredicted RBP20.21■□□□□ 0.83
HMGN1P19-201ENST00000436976 BMP1P13497 986 aa20.21■□□□□ 0.83
HMGN1P19-201ENST00000436976 ADORA2AP29274 412 aa20.21■□□□□ 0.83
HMGN1P19-201ENST00000436976 GSTO1P78417 241 aa20.21■□□□□ 0.83
HMGN1P19-201ENST00000436976 XAGE2Q96GT9 111 aa20.21■□□□□ 0.83
HMGN1P19-201ENST00000436976 PQBP1O60828 265 aaKnown RBP20.2■□□□□ 0.82
HMGN1P19-201ENST00000436976 COBLO75128 1261 aa20.2■□□□□ 0.82
HMGN1P19-201ENST00000436976 DPP9Q86TI2 863 aa20.2■□□□□ 0.82
HMGN1P19-201ENST00000436976 FOXP4Q8IVH2 680 aaPredicted RBP20.2■□□□□ 0.82
HMGN1P19-201ENST00000436976 A0A1B0GUL7 405 aa20.19■□□□□ 0.82
HMGN1P19-201ENST00000436976 VCAM1P19320 739 aa20.19■□□□□ 0.82
HMGN1P19-201ENST00000436976 FAAP100Q0VG06 881 aa20.19■□□□□ 0.82
HMGN1P19-201ENST00000436976 RASIP1Q5U651 963 aa20.19■□□□□ 0.82
HMGN1P19-201ENST00000436976 C16orf59Q7L2K0 433 aa20.19■□□□□ 0.82
HMGN1P19-201ENST00000436976 MAPKAPK5Q8IW41 473 aa20.19■□□□□ 0.82
HMGN1P19-201ENST00000436976 IL27Q8NEV9 243 aa20.19■□□□□ 0.82
HMGN1P19-201ENST00000436976 EPHX3Q9H6B9 360 aa20.19■□□□□ 0.82
HMGN1P19-201ENST00000436976 TMEM39AQ9NV64 488 aa20.19■□□□□ 0.82
HMGN1P19-201ENST00000436976 PALD1Q9ULE6 856 aa20.19■□□□□ 0.82
HMGN1P19-201ENST00000436976 HCN4Q9Y3Q4 1203 aa20.19■□□□□ 0.82
HMGN1P19-201ENST00000436976 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.19■□□□□ 0.82
HMGN1P19-201ENST00000436976 FLT1P17948 1338 aa20.19■□□□□ 0.82
HMGN1P19-201ENST00000436976 GH2P01242 217 aa20.18■□□□□ 0.82
HMGN1P19-201ENST00000436976 CRACR2BQ8N4Y2 399 aaPredicted RBP20.18■□□□□ 0.82
HMGN1P19-201ENST00000436976 TGFBRAP1Q8WUH2 860 aa20.18■□□□□ 0.82
HMGN1P19-201ENST00000436976 AATFQ9NY61 560 aaKnown RBP eCLIP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms