RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 USP5P45974 858 aa9.45□□□□□ -0.9
VPS50-203ENST00000436177 ATP8B2P98198 1209 aa9.45□□□□□ -0.9
VPS50-203ENST00000436177 MAP3K12Q12852 859 aa9.45□□□□□ -0.9
VPS50-203ENST00000436177 PDE3AQ14432 1141 aa9.45□□□□□ -0.9
VPS50-203ENST00000436177 HSP90AB4PQ58FF6 505 aa9.45□□□□□ -0.9
VPS50-203ENST00000436177 FOXP4Q8IVH2 680 aaPredicted RBP9.45□□□□□ -0.9
VPS50-203ENST00000436177 ZNF512BQ96KM6 892 aaPredicted RBP9.45□□□□□ -0.9
VPS50-203ENST00000436177 DEFB118Q96PH6 123 aa9.45□□□□□ -0.9
VPS50-203ENST00000436177 ASCC2Q9H1I8 757 aaPredicted RBP9.45□□□□□ -0.9
VPS50-203ENST00000436177 GINM1Q9NU53 330 aa9.45□□□□□ -0.9
VPS50-203ENST00000436177 SAP30BPQ9UHR5 308 aaKnown RBP9.45□□□□□ -0.9
VPS50-203ENST00000436177 BRCA2P51587 3418 aa9.44□□□□□ -0.9
VPS50-203ENST00000436177 EVI5O60447 810 aa9.44□□□□□ -0.9
VPS50-203ENST00000436177 SGPL1O95470 568 aa9.44□□□□□ -0.9
VPS50-203ENST00000436177 HMGCRP04035 888 aa9.44□□□□□ -0.9
VPS50-203ENST00000436177 CYP2E1P05181 493 aaPredicted RBP9.44□□□□□ -0.9
VPS50-203ENST00000436177 MS4A1P11836 297 aa9.44□□□□□ -0.9
VPS50-203ENST00000436177 BACE1P56817 501 aa9.44□□□□□ -0.9
VPS50-203ENST00000436177 PPP4CP60510 307 aa9.44□□□□□ -0.9
VPS50-203ENST00000436177 AACSQ86V21 672 aa9.44□□□□□ -0.9
VPS50-203ENST00000436177 PLPP6Q8IY26 295 aa9.44□□□□□ -0.9
VPS50-203ENST00000436177 GTF3C2Q8WUA4 911 aaPredicted RBP9.44□□□□□ -0.9
VPS50-203ENST00000436177 WDR18Q9BV38 432 aa9.44□□□□□ -0.9
VPS50-203ENST00000436177 CCDC8Q9H0W5 538 aaPredicted RBP9.44□□□□□ -0.9
VPS50-203ENST00000436177 PIH1D3Q9NQM4 214 aaKnown RBP9.44□□□□□ -0.9
VPS50-203ENST00000436177 DBNLQ9UJU6 430 aaKnown RBP9.44□□□□□ -0.9
VPS50-203ENST00000436177 PALD1Q9ULE6 856 aa9.44□□□□□ -0.9
VPS50-203ENST00000436177 ZBTB21Q9ULJ3 1066 aa9.44□□□□□ -0.9
VPS50-203ENST00000436177 ZSWIM8A7E2V4 1837 aa9.44□□□□□ -0.9
VPS50-203ENST00000436177 C19orf81C9J6K1 198 aa9.43□□□□□ -0.9
VPS50-203ENST00000436177 USP17L10C9JJH3 530 aa9.43□□□□□ -0.9
VPS50-203ENST00000436177 HMMRO75330 724 aa9.43□□□□□ -0.9
VPS50-203ENST00000436177 GDF11O95390 407 aa9.43□□□□□ -0.9
VPS50-203ENST00000436177 SH3D19Q5HYK7 790 aa9.43□□□□□ -0.9
VPS50-203ENST00000436177 TMED8Q6PL24 325 aaPredicted RBP9.43□□□□□ -0.9
VPS50-203ENST00000436177 MAGEB6Q8N7X4 407 aa9.43□□□□□ -0.9
VPS50-203ENST00000436177 MIGA1Q8NAN2 632 aa9.43□□□□□ -0.9
VPS50-203ENST00000436177 GPRC5AQ8NFJ5 357 aa9.43□□□□□ -0.9
VPS50-203ENST00000436177 SOCS4Q8WXH5 440 aa9.43□□□□□ -0.9
VPS50-203ENST00000436177 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.43□□□□□ -0.9
VPS50-203ENST00000436177 BCL11AQ9H165 835 aa9.43□□□□□ -0.9
VPS50-203ENST00000436177 TLR7Q9NYK1 1049 aaKnown RBP9.43□□□□□ -0.9
VPS50-203ENST00000436177 NOP58Q9Y2X3 529 aaKnown RBP9.43□□□□□ -0.9
VPS50-203ENST00000436177 ARHGAP33O14559 1287 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 GLRX3O76003 335 aaKnown RBP9.42□□□□□ -0.9
VPS50-203ENST00000436177 MAPK4P31152 587 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 FXR1P51114 621 aaKnown RBP eCLIP9.42□□□□□ -0.9
VPS50-203ENST00000436177 HERVK_113P62684 666 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 DYNLL1P63167 89 aaKnown RBP9.42□□□□□ -0.9
VPS50-203ENST00000436177 TTF1Q15361 905 aaPredicted RBP9.42□□□□□ -0.9
VPS50-203ENST00000436177 ADGRD1Q6QNK2 874 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 USP17L2Q6R6M4 530 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 NECAB2Q7Z6G3 386 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 ADGRA1Q86SQ6 560 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 TTC6Q86TZ1 520 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 NUDT12Q9BQG2 462 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 PAGR1Q9BTK6 254 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 HMX1Q9NP08 348 aaPredicted RBP9.42□□□□□ -0.9
VPS50-203ENST00000436177 CABP5Q9NP86 173 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 MORF4L1Q9UBU8 362 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 SERPINB13Q9UIV8 391 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 EXOC6BQ9Y2D4 811 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 MAST2Q6P0Q8 1798 aa9.42□□□□□ -0.9
VPS50-203ENST00000436177 APBB1O00213 710 aa9.41□□□□□ -0.9
VPS50-203ENST00000436177 ZBTB7BO15156 539 aaPredicted RBP9.41□□□□□ -0.9
VPS50-203ENST00000436177 GH2P01242 217 aa9.41□□□□□ -0.9
VPS50-203ENST00000436177 IFIT2P09913 472 aaKnown RBP9.41□□□□□ -0.9
VPS50-203ENST00000436177 RLBP1P12271 317 aa9.41□□□□□ -0.9
VPS50-203ENST00000436177 ZKSCAN1P17029 563 aaPredicted RBP9.41□□□□□ -0.9
VPS50-203ENST00000436177 HOXA7P31268 230 aaPredicted RBP9.41□□□□□ -0.9
VPS50-203ENST00000436177 PSEN2P49810 448 aa9.41□□□□□ -0.9
VPS50-203ENST00000436177 USP14P54578 494 aa9.41□□□□□ -0.9
VPS50-203ENST00000436177 CCNA1P78396 465 aa9.41□□□□□ -0.9
VPS50-203ENST00000436177 RRP1BQ14684 758 aaKnown RBP9.41□□□□□ -0.9
VPS50-203ENST00000436177 RAB3GAP1Q15042 981 aa9.41□□□□□ -0.9
VPS50-203ENST00000436177 ZYXQ15942 572 aaKnown RBP9.41□□□□□ -0.9
VPS50-203ENST00000436177 WDR78Q5VTH9 848 aa9.41□□□□□ -0.9
VPS50-203ENST00000436177 CEP85Q6P2H3 762 aa9.41□□□□□ -0.9
VPS50-203ENST00000436177 TRMT44Q8IYL2 757 aaKnown RBP9.41□□□□□ -0.9
VPS50-203ENST00000436177 CLASRPQ8N2M8 674 aaKnown RBP9.41□□□□□ -0.9
VPS50-203ENST00000436177 EAF2Q96CJ1 260 aaPredicted RBP9.41□□□□□ -0.9
VPS50-203ENST00000436177 CRNKL1Q9BZJ0 848 aaKnown RBP9.41□□□□□ -0.9
VPS50-203ENST00000436177 CHMP4BQ9H444 224 aaKnown RBP9.41□□□□□ -0.9
VPS50-203ENST00000436177 DNAJC18Q9H819 358 aa9.41□□□□□ -0.9
VPS50-203ENST00000436177 PAK6Q9NQU5 681 aaPredicted RBP9.41□□□□□ -0.9
VPS50-203ENST00000436177 ZBED9Q6R2W3 1325 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 RPTORQ8N122 1335 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 MAGEB6P1A0A0J9YX57 407 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 POLR3DP05423 398 aaPredicted RBP9.4□□□□□ -0.9
VPS50-203ENST00000436177 CYP2B6P20813 491 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 RGS2P41220 211 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 ABCB5Q2M3G0 1257 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 DMRTA1Q5VZB9 504 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 DIEXFQ68CQ4 756 aaKnown RBP9.4□□□□□ -0.9
VPS50-203ENST00000436177 UBE2Q1Q7Z7E8 422 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 AMOTL1Q8IY63 956 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 ANKLE1Q8NAG6 615 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 PANK1Q8TE04 598 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 DDRGK1Q96HY6 314 aa9.4□□□□□ -0.9
VPS50-203ENST00000436177 PAWRQ96IZ0 340 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms