RNA–Protein interactions for RNA: ENST00000434703.5

SOX9-AS1-204, SOX9 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene SOX9-AS1, Length 3,032 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-204ENST00000434703 FAM196BA6NMK8 535 aa11.46□□□□□ -0.57
SOX9-AS1-204ENST00000434703 CTCFLQ8NI51 663 aaPredicted RBP11.46□□□□□ -0.57
SOX9-AS1-204ENST00000434703 TCP11L1Q9NUJ3 509 aa11.46□□□□□ -0.57
SOX9-AS1-204ENST00000434703 SERPINB13Q9UIV8 391 aa11.46□□□□□ -0.57
SOX9-AS1-204ENST00000434703 BCS1LQ9Y276 419 aa11.46□□□□□ -0.57
SOX9-AS1-204ENST00000434703 UTRNP46939 3433 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 ELP1O95163 1332 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 PSME4Q14997 1843 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 FSD2A1L4K1 749 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 DDTLA6NHG4 134 aaPredicted RBP11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 NFKBIEO00221 500 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 DEXIO95424 95 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 VIL1P09327 827 aaKnown RBP11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 AKR1B1P15121 316 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 PPP2R5BQ15173 497 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 PKN1Q16512 942 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 SOGA3Q5TF21 947 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 SH3BP5LQ7L8J4 393 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 CLEC10AQ8IUN9 316 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 NIM1KQ8IY84 436 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 PIBF1Q8WXW3 757 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 CEP95Q96GE4 821 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 PGBD1Q96JS3 809 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 GMLQ99445 158 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 ZNRF3Q9ULT6 936 aa11.46□□□□□ -0.58
SOX9-AS1-204ENST00000434703 MYH6P13533 1939 aa11.45□□□□□ -0.58
SOX9-AS1-204ENST00000434703 TRIM29Q14134 588 aa11.45□□□□□ -0.58
SOX9-AS1-204ENST00000434703 STAG2Q8N3U4 1231 aa11.45□□□□□ -0.58
SOX9-AS1-204ENST00000434703 RNF26Q9BY78 433 aaPredicted RBP11.45□□□□□ -0.58
SOX9-AS1-204ENST00000434703 TAOK3Q9H2K8 898 aa11.45□□□□□ -0.58
SOX9-AS1-204ENST00000434703 RBM28Q9NW13 759 aaKnown RBP11.45□□□□□ -0.58
SOX9-AS1-204ENST00000434703 CFAP45Q9UL16 551 aa11.45□□□□□ -0.58
SOX9-AS1-204ENST00000434703 SHMT1P34896 483 aa11.45□□□□□ -0.58
SOX9-AS1-204ENST00000434703 NLGN2Q8NFZ4 835 aa11.45□□□□□ -0.58
SOX9-AS1-204ENST00000434703 WASF1Q92558 559 aa11.45□□□□□ -0.58
SOX9-AS1-204ENST00000434703 IDI2Q9BXS1 227 aa11.45□□□□□ -0.58
SOX9-AS1-204ENST00000434703 DNAJC18Q9H819 358 aa11.45□□□□□ -0.58
SOX9-AS1-204ENST00000434703 CNTNAP5Q8WYK1 1306 aa11.45□□□□□ -0.58
SOX9-AS1-204ENST00000434703 SYCE3A1L190 88 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 GOLGA6L3A6NEY3 463 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 VEGFAP15692 232 aaPredicted RBP11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 NT5C2P49902 561 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 CXCL9Q07325 125 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 MYSM1Q5VVJ2 828 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 ZSCAN29Q8IWY8 852 aaPredicted RBP11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 ZNF396Q96N95 335 aaPredicted RBP11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 VPS54Q9P1Q0 977 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 CD2APQ9Y5K6 639 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 CLIC4Q9Y696 253 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 BTBD18B2RXH4 712 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 PRPF3O43395 683 aaKnown RBP11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 HLA-DOAP06340 250 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 LIG1P18858 919 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 EIF6P56537 245 aaKnown RBP11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 AKAP17AQ02040 695 aaKnown RBP11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 SHROOM1Q2M3G4 852 aaPredicted RBP11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 SLC35G1Q2M3R5 365 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 FER1L6Q2WGJ9 1857 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 CLRN2A0PK11 232 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 GOLGA8HP0CJ92 632 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 ZNF445P59923 1031 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 CCDC178Q5BJE1 867 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 BRAPQ7Z569 592 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 RCOR1Q9UKL0 485 aa11.44□□□□□ -0.58
SOX9-AS1-204ENST00000434703 SRCAPQ6ZRS2 3230 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 SIPA1L1O43166 1804 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 SHTN1A0MZ66 631 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 MMP1P03956 469 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 RASSF7Q02833 373 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 GRM4Q14833 912 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 OXER1Q8TDS5 423 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 CPVLQ9H3G5 476 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 MAD2L2Q9UI95 211 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 MYO3BQ8WXR4 1341 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 MYH8P13535 1937 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 SPDYE2BA6NHP3 402 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 SPDYE6P0CI01 402 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 U2AF2P26368 475 aaKnown RBP eCLIP11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 KIF5BP33176 963 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 NR5A1Q13285 461 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 GNL2Q13823 731 aaKnown RBP11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 DIS3L2Q8IYB7 885 aaKnown RBP11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 VPS33BQ9H267 617 aa11.43□□□□□ -0.58
SOX9-AS1-204ENST00000434703 GOLGA6L4A6NEF3 574 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 PRELPP51888 382 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 RGS22Q8NE09 1264 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 MTMR4Q9NYA4 1195 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 RTEL1Q9NZ71 1219 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 SWAP70Q9UH65 585 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 TCP10L2B9ZVM9 353 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 NOVP48745 357 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 DLGAP5Q15398 846 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 ATL3Q6DD88 541 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 USP17L2Q6R6M4 530 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 LRRC47Q8N1G4 583 aaKnown RBP11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 OGFOD1Q8N543 542 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 EHD4Q9H223 541 aa11.42□□□□□ -0.58
SOX9-AS1-204ENST00000434703 MPHOSPH10O00566 681 aaKnown RBP11.41□□□□□ -0.58
SOX9-AS1-204ENST00000434703 CYTH3O43739 400 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms