RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 SETDB1Q15047 1291 aa9.84□□□□□ -0.83
PTPRK-212ENST00000434424 LONRF2Q1L5Z9 754 aa9.84□□□□□ -0.83
PTPRK-212ENST00000434424 WIPI1Q5MNZ9 446 aaPredicted RBP9.84□□□□□ -0.83
PTPRK-212ENST00000434424 GDF6Q6KF10 455 aaPredicted RBP9.84□□□□□ -0.83
PTPRK-212ENST00000434424 KRTAP19-1Q8IUB9 90 aa9.84□□□□□ -0.83
PTPRK-212ENST00000434424 IL22RA1Q8N6P7 574 aa9.84□□□□□ -0.83
PTPRK-212ENST00000434424 SPATA9Q9BWV2 254 aa9.84□□□□□ -0.83
PTPRK-212ENST00000434424 CACNA2D2Q9NY47 1150 aa9.84□□□□□ -0.83
PTPRK-212ENST00000434424 SNCAIPQ9Y6H5 919 aa9.84□□□□□ -0.83
PTPRK-212ENST00000434424 GFRA2O00451 464 aa9.83□□□□□ -0.84
PTPRK-212ENST00000434424 SOX1O00570 391 aaPredicted RBP9.83□□□□□ -0.84
PTPRK-212ENST00000434424 EIF4EBP3O60516 100 aaPredicted RBP9.83□□□□□ -0.84
PTPRK-212ENST00000434424 FAM153BP0C7A2 387 aa9.83□□□□□ -0.84
PTPRK-212ENST00000434424 FSTP19883 344 aa9.83□□□□□ -0.84
PTPRK-212ENST00000434424 CNGA1P29973 690 aa9.83□□□□□ -0.84
PTPRK-212ENST00000434424 ZC3H12BQ5HYM0 836 aaKnown RBP9.83□□□□□ -0.84
PTPRK-212ENST00000434424 INTS3Q68E01 1043 aaKnown RBP9.83□□□□□ -0.84
PTPRK-212ENST00000434424 UNC5AQ6ZN44 842 aa9.83□□□□□ -0.84
PTPRK-212ENST00000434424 Q6ZS46 218 aa9.83□□□□□ -0.84
PTPRK-212ENST00000434424 LRRC47Q8N1G4 583 aaKnown RBP9.83□□□□□ -0.84
PTPRK-212ENST00000434424 PRPF38AQ8NAV1 312 aaKnown RBP9.83□□□□□ -0.84
PTPRK-212ENST00000434424 GPBAR1Q8TDU6 330 aa9.83□□□□□ -0.84
PTPRK-212ENST00000434424 SLC26A8Q96RN1 970 aa9.83□□□□□ -0.84
PTPRK-212ENST00000434424 CEP89Q96ST8 783 aa9.83□□□□□ -0.84
PTPRK-212ENST00000434424 ZC3H12CQ9C0D7 883 aaKnown RBP9.83□□□□□ -0.84
PTPRK-212ENST00000434424 MRPL18Q9H0U6 180 aaKnown RBP9.83□□□□□ -0.84
PTPRK-212ENST00000434424 PHAXQ9H814 394 aaKnown RBP9.83□□□□□ -0.84
PTPRK-212ENST00000434424 HOMER2Q9NSB8 354 aa9.83□□□□□ -0.84
PTPRK-212ENST00000434424 GMIPQ9P107 970 aa9.83□□□□□ -0.84
PTPRK-212ENST00000434424 ABCC8Q09428 1581 aa9.83□□□□□ -0.84
PTPRK-212ENST00000434424 GSTM4Q03013 218 aa9.82□□□□□ -0.84
PTPRK-212ENST00000434424 C21orf62-AS1Q17RA5 79 aa9.82□□□□□ -0.84
PTPRK-212ENST00000434424 HDXQ7Z353 690 aa9.82□□□□□ -0.84
PTPRK-212ENST00000434424 CACTIN-AS1Q8N1I8 211 aa9.82□□□□□ -0.84
PTPRK-212ENST00000434424 NINJ1Q92982 152 aa9.82□□□□□ -0.84
PTPRK-212ENST00000434424 EPN3Q9H201 632 aa9.82□□□□□ -0.84
PTPRK-212ENST00000434424 SOX17Q9H6I2 414 aaPredicted RBP9.82□□□□□ -0.84
PTPRK-212ENST00000434424 REV1Q9UBZ9 1251 aa9.82□□□□□ -0.84
PTPRK-212ENST00000434424 CORINQ9Y5Q5 1042 aa9.82□□□□□ -0.84
PTPRK-212ENST00000434424 CCDC163A0A0D9SF12 145 aa9.81□□□□□ -0.84
PTPRK-212ENST00000434424 IQCA1LA6NCM1 817 aa9.81□□□□□ -0.84
PTPRK-212ENST00000434424 H3BRJ5 948 aa9.81□□□□□ -0.84
PTPRK-212ENST00000434424 NME1P15531 152 aaKnown RBP9.81□□□□□ -0.84
PTPRK-212ENST00000434424 EPHA1P21709 976 aa9.81□□□□□ -0.84
PTPRK-212ENST00000434424 OVOS1Q6IE37 1185 aa9.81□□□□□ -0.84
PTPRK-212ENST00000434424 JDP2Q8WYK2 163 aa9.81□□□□□ -0.84
PTPRK-212ENST00000434424 ATG4CQ96DT6 458 aa9.81□□□□□ -0.84
PTPRK-212ENST00000434424 MFSD3Q96ES6 412 aa9.81□□□□□ -0.84
PTPRK-212ENST00000434424 PLPPR2Q96GM1 343 aa9.81□□□□□ -0.84
PTPRK-212ENST00000434424 FAN1Q9Y2M0 1017 aa9.81□□□□□ -0.84
PTPRK-212ENST00000434424 SUSD5O60279 629 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 CYP11A1P05108 521 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 PLCG1P19174 1290 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 HNRNPUQ00839 825 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTPRK-212ENST00000434424 PDE4BQ07343 736 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 INPP5AQ14642 412 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 ZYXQ15942 572 aaKnown RBP9.8□□□□□ -0.84
PTPRK-212ENST00000434424 TM4SF20Q53R12 229 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 LRFN4Q6PJG9 635 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 NLRC3Q7RTR2 1065 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 NIM1KQ8IY84 436 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 AGGF1Q8N302 714 aaeCLIP9.8□□□□□ -0.84
PTPRK-212ENST00000434424 ZBTB38Q8NAP3 1195 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-212ENST00000434424 CHAC2Q8WUX2 184 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 CORO1BQ9BR76 489 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 KRT82Q9NSB4 513 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 TACC3Q9Y6A5 838 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 LTBP3Q9NS15 1303 aa9.8□□□□□ -0.84
PTPRK-212ENST00000434424 SLC22A31A6NKX4 558 aa9.79□□□□□ -0.84
PTPRK-212ENST00000434424 ACRP10323 421 aa9.79□□□□□ -0.84
PTPRK-212ENST00000434424 ARL4DP49703 201 aa9.79□□□□□ -0.84
PTPRK-212ENST00000434424 SLC10A6Q3KNW5 377 aa9.79□□□□□ -0.84
PTPRK-212ENST00000434424 ODR4Q5SWX8 454 aa9.79□□□□□ -0.84
PTPRK-212ENST00000434424 KIAA1211LQ6NV74 962 aa9.79□□□□□ -0.84
PTPRK-212ENST00000434424 DHX37Q8IY37 1157 aaKnown RBP9.79□□□□□ -0.84
PTPRK-212ENST00000434424 ELMO3Q96BJ8 720 aa9.79□□□□□ -0.84
PTPRK-212ENST00000434424 IER2Q9BTL4 223 aa9.79□□□□□ -0.84
PTPRK-212ENST00000434424 ATP8A1Q9Y2Q0 1164 aa9.79□□□□□ -0.84
PTPRK-212ENST00000434424 WIZO95785 1651 aa9.79□□□□□ -0.84
PTPRK-212ENST00000434424 AQRO60306 1485 aaKnown RBP eCLIP9.79□□□□□ -0.84
PTPRK-212ENST00000434424 TNFRSF10CO14798 259 aa9.78□□□□□ -0.84
PTPRK-212ENST00000434424 MYCLP1P12525 358 aaPredicted RBP9.78□□□□□ -0.84
PTPRK-212ENST00000434424 CDCP2Q5VXM1 449 aa9.78□□□□□ -0.84
PTPRK-212ENST00000434424 GALNT11Q8NCW6 608 aa9.78□□□□□ -0.84
PTPRK-212ENST00000434424 SLC7A3Q8WY07 619 aa9.78□□□□□ -0.84
PTPRK-212ENST00000434424 CNNM2Q9H8M5 875 aa9.78□□□□□ -0.84
PTPRK-212ENST00000434424 PCDHB10Q9UN67 800 aa9.78□□□□□ -0.84
PTPRK-212ENST00000434424 TOPBP1Q92547 1522 aa9.77□□□□□ -0.84
PTPRK-212ENST00000434424 TM4SF5O14894 197 aa9.77□□□□□ -0.85
PTPRK-212ENST00000434424 ADCY3O60266 1144 aa9.77□□□□□ -0.85
PTPRK-212ENST00000434424 CDC25BP30305 580 aa9.77□□□□□ -0.85
PTPRK-212ENST00000434424 SSTR4P31391 388 aa9.77□□□□□ -0.85
PTPRK-212ENST00000434424 SLC7A5Q01650 507 aa9.77□□□□□ -0.85
PTPRK-212ENST00000434424 C19orf57Q0VDD7 668 aa9.77□□□□□ -0.85
PTPRK-212ENST00000434424 POU4F3Q15319 338 aa9.77□□□□□ -0.85
PTPRK-212ENST00000434424 CT47A1Q5JQC4 288 aaPredicted RBP9.77□□□□□ -0.85
PTPRK-212ENST00000434424 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.77□□□□□ -0.85
PTPRK-212ENST00000434424 SLC51AQ86UW1 340 aa9.77□□□□□ -0.85
PTPRK-212ENST00000434424 THNSL2Q86YJ6 484 aa9.77□□□□□ -0.85
PTPRK-212ENST00000434424 JAMLQ86YT9 394 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms