RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 ACSF2Q96CM8 615 aaPredicted RBP8.8□□□□□ -1
HDAC9-213ENST00000433709 DUSP23Q9BVJ7 150 aa8.8□□□□□ -1
HDAC9-213ENST00000433709 FOXQ1Q9C009 403 aa8.8□□□□□ -1
HDAC9-213ENST00000433709 WDR7Q9Y4E6 1490 aa8.8□□□□□ -1
HDAC9-213ENST00000433709 EPRSP07814 1512 aaKnown RBP8.8□□□□□ -1
HDAC9-213ENST00000433709 PHLDB1Q86UU1 1377 aa8.79□□□□□ -1
HDAC9-213ENST00000433709 LRIG2O94898 1065 aa8.79□□□□□ -1
HDAC9-213ENST00000433709 HTR3BO95264 441 aa8.79□□□□□ -1
HDAC9-213ENST00000433709 PRAMEF13Q5VWM6 474 aa8.79□□□□□ -1
HDAC9-213ENST00000433709 DUSP27Q5VZP5 1158 aa8.79□□□□□ -1
HDAC9-213ENST00000433709 TMEM87BQ96K49 555 aa8.79□□□□□ -1
HDAC9-213ENST00000433709 DPH2Q9BQC3 489 aaPredicted RBP8.79□□□□□ -1
HDAC9-213ENST00000433709 PRDM10Q9NQV6 1147 aa8.79□□□□□ -1
HDAC9-213ENST00000433709 REV1Q9UBZ9 1251 aa8.79□□□□□ -1
HDAC9-213ENST00000433709 ADAM30Q9UKF2 790 aa8.79□□□□□ -1
HDAC9-213ENST00000433709 PCDHB14Q9Y5E9 798 aa8.79□□□□□ -1
HDAC9-213ENST00000433709 PRR36Q9H6K5 1346 aa8.79□□□□□ -1
HDAC9-213ENST00000433709 UPK3BL1B0FP48 263 aa8.78□□□□□ -1
HDAC9-213ENST00000433709 UPK3BL2E5RIL1 263 aa8.78□□□□□ -1
HDAC9-213ENST00000433709 MCM4P33991 863 aa8.78□□□□□ -1
HDAC9-213ENST00000433709 CAP2P40123 477 aa8.78□□□□□ -1
HDAC9-213ENST00000433709 PAK2Q13177 524 aa8.78□□□□□ -1
HDAC9-213ENST00000433709 MCATQ8IVS2 390 aaKnown RBP8.78□□□□□ -1
HDAC9-213ENST00000433709 SLITRK4Q8IW52 837 aa8.78□□□□□ -1
HDAC9-213ENST00000433709 MRPL41Q8IXM3 137 aaKnown RBP8.78□□□□□ -1
HDAC9-213ENST00000433709 XAGE3Q8WTP9 111 aa8.78□□□□□ -1
HDAC9-213ENST00000433709 TGIF2Q9GZN2 237 aa8.78□□□□□ -1
HDAC9-213ENST00000433709 ACBD3Q9H3P7 528 aa8.78□□□□□ -1
HDAC9-213ENST00000433709 RNF112Q9ULX5 631 aa8.78□□□□□ -1
HDAC9-213ENST00000433709 LEMD3Q9Y2U8 911 aa8.78□□□□□ -1
HDAC9-213ENST00000433709 ABCA8O94911 1581 aa8.78□□□□□ -1
HDAC9-213ENST00000433709 ZCCHC11Q5TAX3 1644 aaKnown RBP8.77□□□□□ -1.01
HDAC9-213ENST00000433709 DNAJA2O60884 412 aa8.77□□□□□ -1.01
HDAC9-213ENST00000433709 SLITRK5O94991 958 aa8.77□□□□□ -1.01
HDAC9-213ENST00000433709 CST3P01034 146 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-213ENST00000433709 ERCC5P28715 1186 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-213ENST00000433709 CYP27A1Q02318 531 aa8.77□□□□□ -1.01
HDAC9-213ENST00000433709 CLCQ05315 142 aa8.77□□□□□ -1.01
HDAC9-213ENST00000433709 TMEM201Q5SNT2 666 aa8.77□□□□□ -1.01
HDAC9-213ENST00000433709 ZMYM1Q5SVZ6 1142 aa8.77□□□□□ -1.01
HDAC9-213ENST00000433709 SLC6A19Q695T7 634 aa8.77□□□□□ -1.01
HDAC9-213ENST00000433709 GK5Q6ZS86 529 aa8.77□□□□□ -1.01
HDAC9-213ENST00000433709 METTL22Q9BUU2 404 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-213ENST00000433709 LRRC4CQ9HCJ2 640 aa8.77□□□□□ -1.01
HDAC9-213ENST00000433709 IGSF5Q9NSI5 407 aa8.77□□□□□ -1.01
HDAC9-213ENST00000433709 PIM2Q9P1W9 311 aa8.77□□□□□ -1.01
HDAC9-213ENST00000433709 RBAK-RBAKDNI3L0D1 243 aa8.76□□□□□ -1.01
HDAC9-213ENST00000433709 HOXA10P31260 410 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-213ENST00000433709 CYP27C1Q4G0S4 372 aa8.76□□□□□ -1.01
HDAC9-213ENST00000433709 RIN3Q8TB24 985 aa8.76□□□□□ -1.01
HDAC9-213ENST00000433709 MIPEPQ99797 713 aa8.76□□□□□ -1.01
HDAC9-213ENST00000433709 KLHL3Q9UH77 587 aa8.76□□□□□ -1.01
HDAC9-213ENST00000433709 CD109Q6YHK3 1445 aa8.76□□□□□ -1.01
HDAC9-213ENST00000433709 EFCAB5A4FU69 1503 aa8.75□□□□□ -1.01
HDAC9-213ENST00000433709 PLEKHD1A6NEE1 506 aa8.75□□□□□ -1.01
HDAC9-213ENST00000433709 CHURC1-FNTBB4DL54 471 aa8.75□□□□□ -1.01
HDAC9-213ENST00000433709 MED26O95402 600 aa8.75□□□□□ -1.01
HDAC9-213ENST00000433709 SSTR4P31391 388 aa8.75□□□□□ -1.01
HDAC9-213ENST00000433709 TNNI2P48788 182 aa8.75□□□□□ -1.01
HDAC9-213ENST00000433709 FAM214BQ7L5A3 538 aa8.75□□□□□ -1.01
HDAC9-213ENST00000433709 REXO1Q8N1G1 1221 aaKnown RBP8.75□□□□□ -1.01
HDAC9-213ENST00000433709 MFSD2AQ8NA29 543 aa8.75□□□□□ -1.01
HDAC9-213ENST00000433709 FAM13CQ8NE31 585 aa8.75□□□□□ -1.01
HDAC9-213ENST00000433709 CCSER2Q9H7U1 834 aa8.75□□□□□ -1.01
HDAC9-213ENST00000433709 EHMT1Q9H9B1 1298 aa8.75□□□□□ -1.01
HDAC9-213ENST00000433709 KIF21BO75037 1637 aa8.75□□□□□ -1.01
HDAC9-213ENST00000433709 MAGI3Q5TCQ9 1506 aa8.75□□□□□ -1.01
HDAC9-213ENST00000433709 MAP3K4Q9Y6R4 1608 aa8.74□□□□□ -1.01
HDAC9-213ENST00000433709 CYP26A1O43174 497 aa8.74□□□□□ -1.01
HDAC9-213ENST00000433709 ATE1O95260 518 aa8.74□□□□□ -1.01
HDAC9-213ENST00000433709 EOMESO95936 686 aa8.74□□□□□ -1.01
HDAC9-213ENST00000433709 ZNF165P49910 485 aa8.74□□□□□ -1.01
HDAC9-213ENST00000433709 FAM181AQ8N9Y4 354 aa8.74□□□□□ -1.01
HDAC9-213ENST00000433709 HEXIM2Q96MH2 286 aaKnown RBP8.74□□□□□ -1.01
HDAC9-213ENST00000433709 CDK11AQ9UQ88 783 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-213ENST00000433709 U3KQE9 123 aa8.74□□□□□ -1.01
HDAC9-213ENST00000433709 CNTNAP4Q9C0A0 1308 aa8.74□□□□□ -1.01
HDAC9-213ENST00000433709 SAMD9Q5K651 1589 aa8.73□□□□□ -1.01
HDAC9-213ENST00000433709 TSPOAP1O95153 1857 aa8.73□□□□□ -1.01
HDAC9-213ENST00000433709 CFAP43Q8NDM7 1665 aa8.73□□□□□ -1.01
HDAC9-213ENST00000433709 FOSL1P15407 271 aa8.73□□□□□ -1.01
HDAC9-213ENST00000433709 CPSF6Q16630 551 aaKnown RBP eCLIP8.73□□□□□ -1.01
HDAC9-213ENST00000433709 LETMD1Q6P1Q0 360 aa8.73□□□□□ -1.01
HDAC9-213ENST00000433709 GPRASP2Q96D09 838 aa8.73□□□□□ -1.01
HDAC9-213ENST00000433709 ATP10BO94823 1461 aa8.72□□□□□ -1.01
HDAC9-213ENST00000433709 SLC22A31A6NKX4 558 aa8.72□□□□□ -1.01
HDAC9-213ENST00000433709 COBLO75128 1261 aa8.72□□□□□ -1.01
HDAC9-213ENST00000433709 ANTXR1Q9H6X2 564 aa8.72□□□□□ -1.01
HDAC9-213ENST00000433709 GINM1Q9NU53 330 aa8.72□□□□□ -1.01
HDAC9-213ENST00000433709 EFR3BQ9Y2G0 817 aa8.72□□□□□ -1.01
HDAC9-213ENST00000433709 INPP5FQ9Y2H2 1132 aa8.72□□□□□ -1.01
HDAC9-213ENST00000433709 FMN1Q68DA7 1419 aa8.71□□□□□ -1.01
HDAC9-213ENST00000433709 GJA8P48165 433 aa8.71□□□□□ -1.02
HDAC9-213ENST00000433709 YARSP54577 528 aaKnown RBP8.71□□□□□ -1.02
HDAC9-213ENST00000433709 CDH24Q86UP0 819 aa8.71□□□□□ -1.02
HDAC9-213ENST00000433709 SLFN12Q8IYM2 578 aa8.71□□□□□ -1.02
HDAC9-213ENST00000433709 ZC3H7BQ9UGR2 993 aaKnown RBP8.71□□□□□ -1.02
HDAC9-213ENST00000433709 PPT2Q9UMR5 302 aa8.71□□□□□ -1.02
HDAC9-213ENST00000433709 RAPGEF6Q8TEU7 1601 aa8.71□□□□□ -1.02
HDAC9-213ENST00000433709 GRIK1P39086 918 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms