RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 DLGAP5Q15398 846 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 ZNF408Q9H9D4 720 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 ZNF215Q9UL58 517 aaPredicted RBP14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 PFKFB1P16118 471 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 ARID5AQ03989 594 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 KIAA1524Q8TCG1 905 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 NEDD4P46934 1319 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 GRAPQ13588 217 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 KARSQ15046 597 aaKnown RBP14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 USP17L2Q6R6M4 530 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 NOSTRINQ8IVI9 506 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 GRAPLQ8TC17 118 aaPredicted RBP14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 TBC1D22AQ8WUA7 517 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 FAM84BQ96KN1 310 aaPredicted RBP14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 TIGD1Q96MW7 591 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 ARPP21Q9UBL0 812 aaPredicted RBP14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 SERTAD1Q9UHV2 236 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 EIF3JO75822 258 aaKnown RBP14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 GDF11O95390 407 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 USP8P40818 1118 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 EN1Q05925 392 aaPredicted RBP14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 KANK3Q6NY19 840 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 CCDC174Q6PII3 467 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 CLEC17AQ6ZS10 378 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 MAEAQ7L5Y9 396 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 DYMQ7RTS9 669 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 IQUBQ8NA54 791 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 BBXQ8WY36 941 aaPredicted RBP14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 ZMYM6O95789 1325 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 CFBP00751 764 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 KLRK1P26718 216 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 KRT79Q5XKE5 535 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 TBC1D7Q9P0N9 293 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 MRVI1Q9Y6F6 885 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 CARMIL3Q8ND23 1372 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 FER1L4A9Z1Z3 1794 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 KIF5CO60282 957 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 ZBTB7AO95365 584 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 SH3RF3Q8TEJ3 882 aaPredicted RBP14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 TTC14Q96N46 770 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 SCAF8Q9UPN6 1271 aaKnown RBP14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 ELP1O95163 1332 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 SMCO2A6NFE2 343 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 DDX39AO00148 427 aaKnown RBP14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 FKBP15Q5T1M5 1219 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 GRAMD1CQ8IYS0 662 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 VPS16Q9H269 839 aa14.12□□□□□ -0.15
LRRTM1-206ENST00000433224 PLEKHA8P1O95397 391 aa14.11□□□□□ -0.15
LRRTM1-206ENST00000433224 TNIP1Q15025 636 aa14.11□□□□□ -0.15
LRRTM1-206ENST00000433224 SYCP1Q15431 976 aa14.11□□□□□ -0.15
LRRTM1-206ENST00000433224 ZNF34Q8IZ26 560 aa14.11□□□□□ -0.15
LRRTM1-206ENST00000433224 CERKQ8TCT0 537 aa14.11□□□□□ -0.15
LRRTM1-206ENST00000433224 LEMD3Q9Y2U8 911 aa14.11□□□□□ -0.15
LRRTM1-206ENST00000433224 H0YHG0 523 aa14.11□□□□□ -0.15
LRRTM1-206ENST00000433224 TRIM21P19474 475 aaKnown RBP14.11□□□□□ -0.15
LRRTM1-206ENST00000433224 AMPD3Q01432 767 aa14.11□□□□□ -0.15
LRRTM1-206ENST00000433224 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.11□□□□□ -0.15
LRRTM1-206ENST00000433224 KIFC2Q96AC6 838 aa14.11□□□□□ -0.15
LRRTM1-206ENST00000433224 BMP15O95972 392 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 CHRNA5P30532 468 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 KCTD1Q719H9 257 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 CACTINQ8WUQ7 758 aaKnown RBP14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 SLC4A9Q96Q91 983 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 TSG101Q99816 390 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 MXD3Q9BW11 206 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 MED23Q9ULK4 1368 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 ZNF609O15014 1411 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 SH2B2O14492 632 aaPredicted RBP14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 BBOX1O75936 387 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 NAA30Q147X3 362 aaPredicted RBP14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 INTS5Q6P9B9 1019 aaKnown RBP14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 MIGA2Q7L4E1 593 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 SYCP3Q8IZU3 236 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 DRC1Q96MC2 740 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 NIM1KQ8IY84 436 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 ERO1AQ96HE7 468 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 SENP2Q9HC62 589 aa14.1□□□□□ -0.15
LRRTM1-206ENST00000433224 SPATA31A5Q5VU36 1347 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 SPATA31A7Q8IWB4 1347 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 SNAP25P60880 206 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 ODF2Q5BJF6 829 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 ATP8A2Q9NTI2 1148 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 ARHGAP23Q9P227 1491 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 ITSN1Q15811 1721 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 GSG1L2A8MUP6 293 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 SORBS3O60504 671 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 KIF20AO95235 890 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 MRPL12P52815 198 aaKnown RBP14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 SETQ01105 290 aaPredicted RBP14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 NSMFQ6X4W1 530 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 ARFGAP3Q9NP61 516 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 LZTFL1Q9NQ48 299 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 CDHR2Q9BYE9 1310 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 PSMA7O14818 248 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 NKX1-1Q15270 411 aaPredicted RBP14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 VPS72Q15906 364 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 ERCC6LQ2NKX8 1250 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 CD209Q9NNX6 404 aa14.09□□□□□ -0.15
LRRTM1-206ENST00000433224 NFE2L3Q9Y4A8 694 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms