RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 HIBADHP31937 336 aaKnown RBP12.04□□□□□ -0.48
SMPD4-206ENST00000433118 GRIN1Q05586 938 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 ZNF827Q17R98 1081 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 TRIM65Q6PJ69 517 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 CMTR1Q8N1G2 835 aaKnown RBP12.04□□□□□ -0.48
SMPD4-206ENST00000433118 CNNM2Q9H8M5 875 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 NFE2L3Q9Y4A8 694 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 ZNF804BA4D1E1 1349 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 COL1A1P02452 1464 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-206ENST00000433118 ERICH2A1L162 156 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 IFNAR1P17181 557 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 SART3Q15020 963 aaKnown RBP12.04□□□□□ -0.48
SMPD4-206ENST00000433118 RTN1Q16799 776 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 AKNAD1Q5T1N1 836 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 REXO1L1PQ8IX06 675 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 TRMT44Q8IYL2 757 aaKnown RBP12.04□□□□□ -0.48
SMPD4-206ENST00000433118 PROM2Q8N271 834 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 ZNF384Q8TF68 577 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 BAG1Q99933 345 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-206ENST00000433118 KRT23Q9C075 422 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 ST7Q9NRC1 585 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 ARGLU1Q9NWB6 273 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-206ENST00000433118 AATFQ9NY61 560 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMPD4-206ENST00000433118 MAN1B1Q9UKM7 699 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 PPP2R2CQ9Y2T4 447 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 CHD4Q14839 1912 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 SERPINB2P05120 415 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 NUP133Q8WUM0 1156 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 SMARCE1Q969G3 411 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 INTS13Q9NVM9 706 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 SERTAD1Q9UHV2 236 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 MAGEB6P1A0A0J9YX57 407 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 TOB1P50616 345 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-206ENST00000433118 WTAPQ15007 396 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 TXNRD1Q16881 649 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 RILPL1Q5EBL4 403 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 GRAMD1CQ8IYS0 662 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 RPGRQ92834 1020 aaKnown RBP12.03□□□□□ -0.48
SMPD4-206ENST00000433118 CARD6Q9BX69 1037 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 DACH1Q9UI36 760 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 THSD7AQ9UPZ6 1657 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 RREB1Q92766 1687 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 LRP5O75197 1615 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 ADKP55263 362 aaKnown RBP12.03□□□□□ -0.48
SMPD4-206ENST00000433118 MDM2Q00987 491 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-206ENST00000433118 NR5A1Q13285 461 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 ALX1Q15699 326 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 FCHSD1Q86WN1 690 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 SRRTQ9BXP5 876 aaKnown RBP12.03□□□□□ -0.48
SMPD4-206ENST00000433118 FAM53CQ9NYF3 392 aa12.03□□□□□ -0.48
SMPD4-206ENST00000433118 FMR1Q06787 632 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMPD4-206ENST00000433118 MSL1Q68DK7 614 aa12.02□□□□□ -0.49
SMPD4-206ENST00000433118 SPECC1LQ69YQ0 1117 aa12.02□□□□□ -0.49
SMPD4-206ENST00000433118 TMCO3Q6UWJ1 677 aa12.02□□□□□ -0.49
SMPD4-206ENST00000433118 NACAP1Q9BZK3 213 aa12.02□□□□□ -0.49
SMPD4-206ENST00000433118 FBXO2Q9UK22 296 aaPredicted RBP12.02□□□□□ -0.49
SMPD4-206ENST00000433118 PCDHB6Q9Y5E3 794 aa12.02□□□□□ -0.49
SMPD4-206ENST00000433118 VWA3AA6NCI4 1184 aa12.02□□□□□ -0.49
SMPD4-206ENST00000433118 FANCGO15287 622 aa12.02□□□□□ -0.49
SMPD4-206ENST00000433118 PTPREP23469 700 aa12.02□□□□□ -0.49
SMPD4-206ENST00000433118 GNG11P61952 73 aa12.02□□□□□ -0.49
SMPD4-206ENST00000433118 TMEM139Q8IV31 216 aa12.02□□□□□ -0.49
SMPD4-206ENST00000433118 PARP3Q9Y6F1 533 aa12.02□□□□□ -0.49
SMPD4-206ENST00000433118 APBA3O96018 575 aa12.01□□□□□ -0.49
SMPD4-206ENST00000433118 MECOMQ03112 1051 aa12.01□□□□□ -0.49
SMPD4-206ENST00000433118 MLKLQ8NB16 471 aa12.01□□□□□ -0.49
SMPD4-206ENST00000433118 FOXP1Q9H334 677 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-206ENST00000433118 DEXIO95424 95 aa12.01□□□□□ -0.49
SMPD4-206ENST00000433118 CASQ1P31415 396 aa12.01□□□□□ -0.49
SMPD4-206ENST00000433118 FBXO33Q7Z6M2 555 aa12.01□□□□□ -0.49
SMPD4-206ENST00000433118 FHOD1Q9Y613 1164 aa12.01□□□□□ -0.49
SMPD4-206ENST00000433118 BCORQ6W2J9 1755 aa12.01□□□□□ -0.49
SMPD4-206ENST00000433118 DDR1Q08345 913 aa12.01□□□□□ -0.49
SMPD4-206ENST00000433118 GRIK5Q16478 980 aa12.01□□□□□ -0.49
SMPD4-206ENST00000433118 TOGARAM2Q6ZUX3 1019 aa12.01□□□□□ -0.49
SMPD4-206ENST00000433118 CABP5Q9NP86 173 aa12.01□□□□□ -0.49
SMPD4-206ENST00000433118 NHSQ6T4R5 1651 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 CCDC196A0A1B0GTZ2 297 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 GOLGA6L9A6NEM1 432 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 EFCAB8A8MWE9 144 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 STX10O60499 249 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 TADA3O75528 432 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 PNMA6AP0CW24 399 aaPredicted RBP12□□□□□ -0.49
SMPD4-206ENST00000433118 GRAPQ13588 217 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 DIXDC1Q155Q3 683 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 TC2NQ8N9U0 490 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 GRAPLQ8TC17 118 aaPredicted RBP12□□□□□ -0.49
SMPD4-206ENST00000433118 ENOX1Q8TC92 643 aaKnown RBP12□□□□□ -0.49
SMPD4-206ENST00000433118 UBAC1Q9BSL1 405 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 ANKRD2Q9GZV1 360 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 SAMSN1Q9NSI8 373 aaKnown RBP12□□□□□ -0.49
SMPD4-206ENST00000433118 CEP131Q9UPN4 1083 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 TBX2Q13207 712 aaPredicted RBP12□□□□□ -0.49
SMPD4-206ENST00000433118 MORC3Q14149 939 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 USP49Q70CQ1 688 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 ELOA2Q8IYF1 753 aaPredicted RBP12□□□□□ -0.49
SMPD4-206ENST00000433118 CRACR2BQ8N4Y2 399 aaPredicted RBP12□□□□□ -0.49
SMPD4-206ENST00000433118 OXER1Q8TDS5 423 aa12□□□□□ -0.49
SMPD4-206ENST00000433118 WDR24Q96S15 920 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms