RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 CIAO1O76071 339 aa19.54■□□□□ 0.72
NUP50-209ENST00000432340 EPHB4P54760 987 aa19.54■□□□□ 0.72
NUP50-209ENST00000432340 PPIGQ13427 754 aaKnown RBP eCLIP19.54■□□□□ 0.72
NUP50-209ENST00000432340 LRRC41Q15345 812 aa19.54■□□□□ 0.72
NUP50-209ENST00000432340 CCDC85BQ15834 202 aaPredicted RBP19.54■□□□□ 0.72
NUP50-209ENST00000432340 RNF180Q86T96 592 aa19.54■□□□□ 0.72
NUP50-209ENST00000432340 FOXP4Q8IVH2 680 aaPredicted RBP19.54■□□□□ 0.72
NUP50-209ENST00000432340 CRACR2BQ8N4Y2 399 aaPredicted RBP19.54■□□□□ 0.72
NUP50-209ENST00000432340 FERMT2Q96AC1 680 aa19.54■□□□□ 0.72
NUP50-209ENST00000432340 MTIF3Q9H2K0 278 aaKnown RBP19.54■□□□□ 0.72
NUP50-209ENST00000432340 PHF24Q9UPV7 400 aa19.54■□□□□ 0.72
NUP50-209ENST00000432340 PLXNB2O15031 1838 aa19.53■□□□□ 0.72
NUP50-209ENST00000432340 PHKA1P46020 1223 aa19.53■□□□□ 0.72
NUP50-209ENST00000432340 USP14P54578 494 aa19.53■□□□□ 0.72
NUP50-209ENST00000432340 EXOSC9Q06265 439 aaKnown RBP19.53■□□□□ 0.72
NUP50-209ENST00000432340 ATF7IPQ6VMQ6 1270 aa19.53■□□□□ 0.72
NUP50-209ENST00000432340 SLC44A5Q8NCS7 719 aa19.53■□□□□ 0.72
NUP50-209ENST00000432340 TRPV1Q8NER1 839 aa19.53■□□□□ 0.72
NUP50-209ENST00000432340 TOX2Q96NM4 488 aa19.53■□□□□ 0.72
NUP50-209ENST00000432340 NDUFB9Q9Y6M9 179 aa19.53■□□□□ 0.72
NUP50-209ENST00000432340 LAMA2P24043 3122 aaKnown RBP19.53■□□□□ 0.72
NUP50-209ENST00000432340 PHIPQ8WWQ0 1821 aa19.53■□□□□ 0.72
NUP50-209ENST00000432340 PQBP1O60828 265 aaKnown RBP19.52■□□□□ 0.72
NUP50-209ENST00000432340 BMP1P13497 986 aa19.52■□□□□ 0.72
NUP50-209ENST00000432340 CCDC102BQ68D86 513 aa19.52■□□□□ 0.72
NUP50-209ENST00000432340 LBX2Q6XYB7 198 aa19.52■□□□□ 0.72
NUP50-209ENST00000432340 NPLOC4Q8TAT6 608 aa19.52■□□□□ 0.72
NUP50-209ENST00000432340 SNX27Q96L92 541 aa19.52■□□□□ 0.72
NUP50-209ENST00000432340 FEZ1Q99689 392 aa19.52■□□□□ 0.72
NUP50-209ENST00000432340 PBX4Q9BYU1 374 aa19.52■□□□□ 0.72
NUP50-209ENST00000432340 NRBP1Q9UHY1 535 aa19.52■□□□□ 0.72
NUP50-209ENST00000432340 RARBP10826 455 aa19.51■□□□□ 0.71
NUP50-209ENST00000432340 PLCG2P16885 1265 aa19.51■□□□□ 0.71
NUP50-209ENST00000432340 ITGB8P26012 769 aa19.51■□□□□ 0.71
NUP50-209ENST00000432340 MECOMQ03112 1051 aa19.51■□□□□ 0.71
NUP50-209ENST00000432340 RRP1BQ14684 758 aaKnown RBP19.51■□□□□ 0.71
NUP50-209ENST00000432340 TEX11Q8IYF3 940 aa19.51■□□□□ 0.71
NUP50-209ENST00000432340 HERVK_113Q902F9 699 aa19.51■□□□□ 0.71
NUP50-209ENST00000432340 C12orf42Q96LP6 360 aa19.51■□□□□ 0.71
NUP50-209ENST00000432340 SLC28A3Q9HAS3 691 aa19.51■□□□□ 0.71
NUP50-209ENST00000432340 IGHA2P01877 340 aa19.5■□□□□ 0.71
NUP50-209ENST00000432340 IL15P40933 162 aaPredicted RBP19.5■□□□□ 0.71
NUP50-209ENST00000432340 RASGRF1Q13972 1273 aa19.5■□□□□ 0.71
NUP50-209ENST00000432340 PSRC1Q6PGN9 363 aaPredicted RBP19.5■□□□□ 0.71
NUP50-209ENST00000432340 ANKRD33Q7Z3H0 272 aa19.5■□□□□ 0.71
NUP50-209ENST00000432340 ALYREFQ86V81 257 aaKnown RBP19.5■□□□□ 0.71
NUP50-209ENST00000432340 EMILIN3Q9NT22 766 aa19.5■□□□□ 0.71
NUP50-209ENST00000432340 ZBTB21Q9ULJ3 1066 aa19.5■□□□□ 0.71
NUP50-209ENST00000432340 GPR37L1O60883 481 aa19.49■□□□□ 0.71
NUP50-209ENST00000432340 BAG3O95817 575 aa19.49■□□□□ 0.71
NUP50-209ENST00000432340 TIMP1P01033 207 aa19.49■□□□□ 0.71
NUP50-209ENST00000432340 ANO1Q5XXA6 986 aa19.49■□□□□ 0.71
NUP50-209ENST00000432340 ATG9AQ7Z3C6 839 aa19.49■□□□□ 0.71
NUP50-209ENST00000432340 WDR63Q8IWG1 891 aa19.49■□□□□ 0.71
NUP50-209ENST00000432340 NUP133Q8WUM0 1156 aa19.49■□□□□ 0.71
NUP50-209ENST00000432340 NECAB3Q96P71 396 aaPredicted RBP19.49■□□□□ 0.71
NUP50-209ENST00000432340 XPNPEP3Q9NQH7 507 aa19.49■□□□□ 0.71
NUP50-209ENST00000432340 MROH7Q68CQ1 1323 aa19.49■□□□□ 0.71
NUP50-209ENST00000432340 BDP1A6H8Y1 2624 aa19.48■□□□□ 0.71
NUP50-209ENST00000432340 CNMDO75829 334 aa19.48■□□□□ 0.71
NUP50-209ENST00000432340 ADORA2AP29274 412 aa19.48■□□□□ 0.71
NUP50-209ENST00000432340 MVPQ14764 893 aaKnown RBP19.48■□□□□ 0.71
NUP50-209ENST00000432340 SKIV2LQ15477 1246 aaKnown RBP19.48■□□□□ 0.71
NUP50-209ENST00000432340 MFSD5Q6N075 450 aa19.48■□□□□ 0.71
NUP50-209ENST00000432340 CATSPERGQ6ZRH7 1159 aa19.48■□□□□ 0.71
NUP50-209ENST00000432340 TMEM199Q8N511 208 aa19.48■□□□□ 0.71
NUP50-209ENST00000432340 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.48■□□□□ 0.71
NUP50-209ENST00000432340 CACNA1FO60840 1977 aa19.48■□□□□ 0.71
NUP50-209ENST00000432340 ERC2O15083 957 aa19.47■□□□□ 0.71
NUP50-209ENST00000432340 HLA-DOAP06340 250 aa19.47■□□□□ 0.71
NUP50-209ENST00000432340 RFX5P48382 616 aaPredicted RBP19.47■□□□□ 0.71
NUP50-209ENST00000432340 ADGRE1Q14246 886 aa19.47■□□□□ 0.71
NUP50-209ENST00000432340 FAM47AQ5JRC9 791 aa19.47■□□□□ 0.71
NUP50-209ENST00000432340 SHCBP1Q8NEM2 672 aa19.47■□□□□ 0.71
NUP50-209ENST00000432340 EPHX3Q9H6B9 360 aa19.47■□□□□ 0.71
NUP50-209ENST00000432340 HDAC5Q9UQL6 1122 aa19.47■□□□□ 0.71
NUP50-209ENST00000432340 PBX2P40425 430 aa19.46■□□□□ 0.71
NUP50-209ENST00000432340 METTL16Q86W50 562 aaKnown RBP19.46■□□□□ 0.71
NUP50-209ENST00000432340 ABRAQ8N0Z2 381 aa19.46■□□□□ 0.71
NUP50-209ENST00000432340 TSEN34Q9BSV6 310 aaKnown RBP19.46■□□□□ 0.71
NUP50-209ENST00000432340 SIL1Q9H173 461 aa19.46■□□□□ 0.71
NUP50-209ENST00000432340 STARD7Q9NQZ5 370 aa19.46■□□□□ 0.71
NUP50-209ENST00000432340 COG5Q9UP83 839 aa19.46■□□□□ 0.71
NUP50-209ENST00000432340 AKAP2Q9Y2D5 859 aa19.46■□□□□ 0.71
NUP50-209ENST00000432340 A0A1W2PQ45 241 aaPredicted RBP19.45■□□□□ 0.7
NUP50-209ENST00000432340 A0A1W2PQY0 241 aa19.45■□□□□ 0.7
NUP50-209ENST00000432340 DDX10Q13206 875 aaKnown RBP19.45■□□□□ 0.7
NUP50-209ENST00000432340 RASIP1Q5U651 963 aa19.45■□□□□ 0.7
NUP50-209ENST00000432340 PRKRIP1Q9H875 184 aaPredicted RBP19.45■□□□□ 0.7
NUP50-209ENST00000432340 HOXC10Q9NYD6 342 aa19.45■□□□□ 0.7
NUP50-209ENST00000432340 RAI14Q9P0K7 980 aa19.45■□□□□ 0.7
NUP50-209ENST00000432340 GTPBP6O43824 516 aaPredicted RBP19.44■□□□□ 0.7
NUP50-209ENST00000432340 GDF11O95390 407 aa19.44■□□□□ 0.7
NUP50-209ENST00000432340 FAAP100Q0VG06 881 aa19.44■□□□□ 0.7
NUP50-209ENST00000432340 TMEM240Q5SV17 173 aa19.44■□□□□ 0.7
NUP50-209ENST00000432340 NSUN4Q96CB9 384 aaKnown RBP19.44■□□□□ 0.7
NUP50-209ENST00000432340 KIAA1683Q9H0B3 1180 aa19.44■□□□□ 0.7
NUP50-209ENST00000432340 MROH8Q9H579 483 aa19.44■□□□□ 0.7
NUP50-209ENST00000432340 VCAM1P19320 739 aa19.43■□□□□ 0.7
NUP50-209ENST00000432340 MICALL1Q8N3F8 863 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms