RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 DNAJC18Q9H819 358 aa11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 TSHZ2Q9NRE2 1034 aa11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 WDR70Q9NW82 654 aa11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 CEP290O15078 2479 aa11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 DPYSL4O14531 572 aa11.5□□□□□ -0.57
CDC42-IT1-201ENST00000431803 MTFR1Q15390 333 aa11.5□□□□□ -0.57
CDC42-IT1-201ENST00000431803 SH3D19Q5HYK7 790 aa11.5□□□□□ -0.57
CDC42-IT1-201ENST00000431803 MAPKAPK5Q8IW41 473 aa11.5□□□□□ -0.57
CDC42-IT1-201ENST00000431803 TGFBRAP1Q8WUH2 860 aa11.5□□□□□ -0.57
CDC42-IT1-201ENST00000431803 PNMA3Q9UL41 463 aa11.5□□□□□ -0.57
CDC42-IT1-201ENST00000431803 GABRQQ9UN88 632 aa11.5□□□□□ -0.57
CDC42-IT1-201ENST00000431803 USP17L5A8MUK1 530 aa11.49□□□□□ -0.57
CDC42-IT1-201ENST00000431803 ARHGAP33O14559 1287 aa11.49□□□□□ -0.57
CDC42-IT1-201ENST00000431803 HMGCS2P54868 508 aa11.49□□□□□ -0.57
CDC42-IT1-201ENST00000431803 JAG1P78504 1218 aa11.49□□□□□ -0.57
CDC42-IT1-201ENST00000431803 FAM110CQ1W6H9 321 aa11.49□□□□□ -0.57
CDC42-IT1-201ENST00000431803 TMED8Q6PL24 325 aaPredicted RBP11.49□□□□□ -0.57
CDC42-IT1-201ENST00000431803 ERC1Q8IUD2 1116 aa11.49□□□□□ -0.57
CDC42-IT1-201ENST00000431803 GCC1Q96CN9 775 aa11.49□□□□□ -0.57
CDC42-IT1-201ENST00000431803 WDR18Q9BV38 432 aa11.49□□□□□ -0.57
CDC42-IT1-201ENST00000431803 PALD1Q9ULE6 856 aa11.49□□□□□ -0.57
CDC42-IT1-201ENST00000431803 EXOC6BQ9Y2D4 811 aa11.49□□□□□ -0.57
CDC42-IT1-201ENST00000431803 TNPO2O14787 897 aaKnown RBP11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 IDH1O75874 414 aaKnown RBP11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 GJB1P08034 283 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 ASNSP08243 561 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 CCL5P13501 91 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 CYP7A1P22680 504 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 GJA8P48165 433 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 GCLCP48506 637 aaPredicted RBP11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 FLT3LGP49771 235 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 DYNLL1P63167 89 aaKnown RBP11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 IRF5Q13568 498 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 SHROOM1Q2M3G4 852 aaPredicted RBP11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 UBE2Q1Q7Z7E8 422 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 AACSQ86V21 672 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 CERS3Q8IU89 383 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 FOXP4Q8IVH2 680 aaPredicted RBP11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 ANKRD13CQ8N6S4 541 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 PXYLP1Q8TE99 480 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 AS3MTQ9HBK9 375 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 GINM1Q9NU53 330 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 NDUFB9Q9Y6M9 179 aa11.48□□□□□ -0.57
CDC42-IT1-201ENST00000431803 DDX60LQ5H9U9 1706 aaKnown RBP11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 ADCY3O60266 1144 aa11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 MS4A1P11836 297 aa11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 FOSBP53539 338 aa11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 BACE1P56817 501 aa11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 PABPC4Q13310 644 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 MTMR2Q13614 643 aa11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 HSP90AB4PQ58FF6 505 aa11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 CRACR2BQ8N4Y2 399 aaPredicted RBP11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 MAGEB6Q8N7X4 407 aa11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 MIGA1Q8NAN2 632 aa11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 NKX2-3Q8TAU0 364 aa11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 ASCC2Q9H1I8 757 aaPredicted RBP11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 ANTXR1Q9H6X2 564 aa11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 ZBTB21Q9ULJ3 1066 aa11.47□□□□□ -0.57
CDC42-IT1-201ENST00000431803 GDF11O95390 407 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 HLA-DOAP06340 250 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 ELNP15502 786 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 HOXA7P31268 230 aaPredicted RBP11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 PSEN2P49810 448 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 UBXN2AP68543 259 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 MAP3K12Q12852 859 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 E2F4Q16254 413 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 SIRT2Q8IXJ6 389 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 RHPN1Q8TCX5 695 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 RNF208Q9H0X6 261 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 EHD4Q9H223 541 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 IL1RAPL2Q9NP60 686 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 ZBTB40Q9NUA8 1239 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 MORF4L1Q9UBU8 362 aa11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 BIN2Q9UBW5 565 aaPredicted RBP11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 SAP30BPQ9UHR5 308 aaKnown RBP11.46□□□□□ -0.57
CDC42-IT1-201ENST00000431803 DOCK3Q8IZD9 2030 aa11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 C19orf81C9J6K1 198 aa11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 INHAP05111 366 aa11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 HABP4Q5JVS0 413 aaKnown RBP11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 TATDN1Q6P1N9 297 aa11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 RPAP2Q8IXW5 612 aaPredicted RBP11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 U2AF1L4Q8WU68 220 aaKnown RBP11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 COA7Q96BR5 231 aa11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 KCNK17Q96T54 332 aa11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 RIOK1Q9BRS2 568 aaKnown RBP11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 TRIM34Q9BYJ4 488 aa11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 UNC93B1Q9H1C4 597 aa11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 DDX19BQ9UMR2 479 aa11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 MYH1P12882 1939 aa11.45□□□□□ -0.58
CDC42-IT1-201ENST00000431803 SZT2Q5T011 3432 aa11.44□□□□□ -0.58
CDC42-IT1-201ENST00000431803 USP17L10C9JJH3 530 aa11.44□□□□□ -0.58
CDC42-IT1-201ENST00000431803 TTF1Q15361 905 aaPredicted RBP11.44□□□□□ -0.58
CDC42-IT1-201ENST00000431803 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDC42-IT1-201ENST00000431803 KIF1BPQ96EK5 621 aa11.44□□□□□ -0.58
CDC42-IT1-201ENST00000431803 PAK6Q9NQU5 681 aaPredicted RBP11.44□□□□□ -0.58
CDC42-IT1-201ENST00000431803 TMOD4Q9NZQ9 345 aa11.44□□□□□ -0.58
CDC42-IT1-201ENST00000431803 SERPINB13Q9UIV8 391 aa11.44□□□□□ -0.58
CDC42-IT1-201ENST00000431803 GJD2Q9UKL4 321 aa11.44□□□□□ -0.58
CDC42-IT1-201ENST00000431803 COG6Q9Y2V7 657 aa11.44□□□□□ -0.58
CDC42-IT1-201ENST00000431803 H0YGN5 161 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms