RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 SNAPC2Q13487 334 aa17.05■□□□□ 0.32
CSTF3-202ENST00000431742 MOGSQ13724 837 aa17.05■□□□□ 0.32
CSTF3-202ENST00000431742 RAB3GAP1Q15042 981 aa17.05■□□□□ 0.32
CSTF3-202ENST00000431742 MFSD6Q6ZSS7 791 aa17.05■□□□□ 0.32
CSTF3-202ENST00000431742 PRRT2Q7Z6L0 340 aaPredicted RBP17.05■□□□□ 0.32
CSTF3-202ENST00000431742 ZNF444Q8N0Y2 327 aaPredicted RBP17.05■□□□□ 0.32
CSTF3-202ENST00000431742 NEDD1Q8NHV4 660 aa17.05■□□□□ 0.32
CSTF3-202ENST00000431742 NKX2-3Q8TAU0 364 aa17.05■□□□□ 0.32
CSTF3-202ENST00000431742 EPB41L2O43491 1005 aaKnown RBP17.04■□□□□ 0.32
CSTF3-202ENST00000431742 TM4SF4P48230 202 aa17.04■□□□□ 0.32
CSTF3-202ENST00000431742 SREBF2Q12772 1141 aa17.04■□□□□ 0.32
CSTF3-202ENST00000431742 SPP2Q13103 211 aa17.04■□□□□ 0.32
CSTF3-202ENST00000431742 CLEC10AQ8IUN9 316 aa17.04■□□□□ 0.32
CSTF3-202ENST00000431742 SIAH1Q8IUQ4 282 aa17.04■□□□□ 0.32
CSTF3-202ENST00000431742 REM2Q8IYK8 340 aaPredicted RBP17.04■□□□□ 0.32
CSTF3-202ENST00000431742 BRI3BPQ8WY22 251 aa17.04■□□□□ 0.32
CSTF3-202ENST00000431742 RLFQ13129 1914 aa17.04■□□□□ 0.32
CSTF3-202ENST00000431742 CCL15-CCL14A0A0B4J2E2 113 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 TRIM75PA6NK02 468 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 SLC27A2O14975 620 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 TSPY3P0CV98 308 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 TSPY8P0CW00 308 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 CETPP11597 493 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 BACE1P56817 501 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 INHBEP58166 350 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 TFAP4Q01664 338 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 ICA1Q05084 483 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 CCL15Q16663 113 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 SH3D19Q5HYK7 790 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 FAM47AQ5JRC9 791 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 CREB3L3Q68CJ9 461 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 STOX1Q6ZVD7 989 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 KANSL2Q9H9L4 492 aa17.03■□□□□ 0.32
CSTF3-202ENST00000431742 A0A1W2PRG0 241 aa17.02■□□□□ 0.32
CSTF3-202ENST00000431742 USP17L10C9JJH3 530 aa17.02■□□□□ 0.32
CSTF3-202ENST00000431742 RANBP6O60518 1105 aaKnown RBP17.02■□□□□ 0.32
CSTF3-202ENST00000431742 NOVP48745 357 aa17.02■□□□□ 0.32
CSTF3-202ENST00000431742 MTMR2Q13614 643 aa17.02■□□□□ 0.32
CSTF3-202ENST00000431742 C8orf34Q49A92 452 aa17.02■□□□□ 0.32
CSTF3-202ENST00000431742 ACER1Q8TDN7 264 aa17.02■□□□□ 0.32
CSTF3-202ENST00000431742 KCNB2Q92953 911 aa17.02■□□□□ 0.32
CSTF3-202ENST00000431742 CEP95Q96GE4 821 aa17.02■□□□□ 0.32
CSTF3-202ENST00000431742 PTPN18Q99952 460 aa17.02■□□□□ 0.32
CSTF3-202ENST00000431742 KIAA1683Q9H0B3 1180 aa17.02■□□□□ 0.32
CSTF3-202ENST00000431742 CNNM2Q9H8M5 875 aa17.02■□□□□ 0.32
CSTF3-202ENST00000431742 TSPY2A6NKD2 308 aa17.01■□□□□ 0.31
CSTF3-202ENST00000431742 C19orf81C9J6K1 198 aa17.01■□□□□ 0.31
CSTF3-202ENST00000431742 E7EWF7 191 aa17.01■□□□□ 0.31
CSTF3-202ENST00000431742 IGF2BP3O00425 579 aaKnown RBP eCLIP17.01■□□□□ 0.31
CSTF3-202ENST00000431742 RRP12Q5JTH9 1297 aaKnown RBP17.01■□□□□ 0.31
CSTF3-202ENST00000431742 ESR2Q92731 530 aa17.01■□□□□ 0.31
CSTF3-202ENST00000431742 C12orf42Q96LP6 360 aa17.01■□□□□ 0.31
CSTF3-202ENST00000431742 KRT23Q9C075 422 aa17.01■□□□□ 0.31
CSTF3-202ENST00000431742 IL17RBQ9NRM6 502 aa17.01■□□□□ 0.31
CSTF3-202ENST00000431742 TOMM22Q9NS69 142 aa17.01■□□□□ 0.31
CSTF3-202ENST00000431742 TCP11L1Q9NUJ3 509 aa17.01■□□□□ 0.31
CSTF3-202ENST00000431742 MTMR4Q9NYA4 1195 aa17.01■□□□□ 0.31
CSTF3-202ENST00000431742 NYAP2Q9P242 653 aa17.01■□□□□ 0.31
CSTF3-202ENST00000431742 A0A0G2JMZ2 1700 aa17■□□□□ 0.31
CSTF3-202ENST00000431742 B4E1Z4 1266 aa17■□□□□ 0.31
CSTF3-202ENST00000431742 KDM4AO75164 1064 aa17■□□□□ 0.31
CSTF3-202ENST00000431742 EEF2P13639 858 aaKnown RBP17■□□□□ 0.31
CSTF3-202ENST00000431742 HSPA4P34932 840 aa17■□□□□ 0.31
CSTF3-202ENST00000431742 HMGCS2P54868 508 aa17■□□□□ 0.31
CSTF3-202ENST00000431742 DGKZQ13574 1117 aa17■□□□□ 0.31
CSTF3-202ENST00000431742 TSGA10IPQ3SY00 556 aa17■□□□□ 0.31
CSTF3-202ENST00000431742 GPAT2Q6NUI2 795 aa17■□□□□ 0.31
CSTF3-202ENST00000431742 IFNL1Q8IU54 200 aa17■□□□□ 0.31
CSTF3-202ENST00000431742 PROCA1Q8NCQ7 364 aaPredicted RBP17■□□□□ 0.31
CSTF3-202ENST00000431742 ARHGEF10LQ9HCE6 1279 aa17■□□□□ 0.31
CSTF3-202ENST00000431742 TMX2Q9Y320 296 aa17■□□□□ 0.31
CSTF3-202ENST00000431742 BTBD19C9JJ37 291 aa16.99■□□□□ 0.31
CSTF3-202ENST00000431742 NMT2O60551 498 aa16.99■□□□□ 0.31
CSTF3-202ENST00000431742 MAP2K1Q02750 393 aaPredicted RBP16.99■□□□□ 0.31
CSTF3-202ENST00000431742 RNF20Q5VTR2 975 aa16.99■□□□□ 0.31
CSTF3-202ENST00000431742 USP17L2Q6R6M4 530 aa16.99■□□□□ 0.31
CSTF3-202ENST00000431742 FASTKD5Q7L8L6 764 aaKnown RBP16.99■□□□□ 0.31
CSTF3-202ENST00000431742 ANKRD23Q86SG2 305 aa16.99■□□□□ 0.31
CSTF3-202ENST00000431742 MKL1Q969V6 931 aa16.99■□□□□ 0.31
CSTF3-202ENST00000431742 FEZ1Q99689 392 aa16.99■□□□□ 0.31
CSTF3-202ENST00000431742 USP26Q9BXU7 913 aa16.99■□□□□ 0.31
CSTF3-202ENST00000431742 SH2D4AQ9H788 454 aa16.99■□□□□ 0.31
CSTF3-202ENST00000431742 ZCCHC17Q9NP64 241 aaKnown RBP16.99■□□□□ 0.31
CSTF3-202ENST00000431742 EMILIN3Q9NT22 766 aa16.99■□□□□ 0.31
CSTF3-202ENST00000431742 WBP1LQ9NX94 342 aa16.99■□□□□ 0.31
CSTF3-202ENST00000431742 SYNPO2Q9UMS6 1093 aa16.99■□□□□ 0.31
CSTF3-202ENST00000431742 TTLL1O95922 423 aa16.98■□□□□ 0.31
CSTF3-202ENST00000431742 USP14P54578 494 aa16.98■□□□□ 0.31
CSTF3-202ENST00000431742 PPP4R3BQ5MIZ7 849 aa16.98■□□□□ 0.31
CSTF3-202ENST00000431742 RCSD1Q6JBY9 416 aa16.98■□□□□ 0.31
CSTF3-202ENST00000431742 MB21D2Q8IYB1 491 aaPredicted RBP16.98■□□□□ 0.31
CSTF3-202ENST00000431742 RASEFQ8IZ41 740 aa16.98■□□□□ 0.31
CSTF3-202ENST00000431742 FAM43AQ8N2R8 423 aa16.98■□□□□ 0.31
CSTF3-202ENST00000431742 NCOA7Q8NI08 942 aa16.98■□□□□ 0.31
CSTF3-202ENST00000431742 ZSWIM5Q9P217 1185 aa16.98■□□□□ 0.31
CSTF3-202ENST00000431742 AGTPBP1Q9UPW5 1226 aa16.98■□□□□ 0.31
CSTF3-202ENST00000431742 SLC45A1Q9Y2W3 748 aa16.98■□□□□ 0.31
CSTF3-202ENST00000431742 COL11A1P12107 1806 aaPredicted RBP16.98■□□□□ 0.31
CSTF3-202ENST00000431742 EIF5BO60841 1220 aaKnown RBP16.97■□□□□ 0.31
CSTF3-202ENST00000431742 SEC24BO95487 1268 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms