RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SFRP5Q5T4F7 317 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 TMEM132EQ6IEE7 984 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 TMPRSS7Q7RTY8 843 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 ZDHHC14Q8IZN3 488 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 MFSD2AQ8NA29 543 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 ANKRD24Q8TF21 1146 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 XAGE3Q8WTP9 111 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 TEPSINQ96N21 525 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 TRAIPQ9BWF2 469 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 CEP44Q9C0F1 390 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 CYP8B1Q9UNU6 501 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 KCTD3Q9Y597 815 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 PRAMEF27A3QJZ7 478 aa3.9□□□□□ -1.79
CDC40-204ENST00000431461 BRD1O95696 1058 aa3.9□□□□□ -1.79
CDC40-204ENST00000431461 SLBPQ14493 270 aaKnown RBP eCLIP3.9□□□□□ -1.79
CDC40-204ENST00000431461 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.9□□□□□ -1.79
CDC40-204ENST00000431461 ZNF746Q6NUN9 644 aaPredicted RBP3.9□□□□□ -1.79
CDC40-204ENST00000431461 LLGL2Q6P1M3 1020 aa3.9□□□□□ -1.79
CDC40-204ENST00000431461 SRCIN1Q9C0H9 1055 aa3.9□□□□□ -1.79
CDC40-204ENST00000431461 ADAMTS10Q9H324 1103 aa3.9□□□□□ -1.79
CDC40-204ENST00000431461 ZNF552Q9H707 407 aaPredicted RBP3.9□□□□□ -1.79
CDC40-204ENST00000431461 CWC22Q9HCG8 908 aaKnown RBP3.9□□□□□ -1.79
CDC40-204ENST00000431461 PCDHA4Q9UN74 947 aa3.9□□□□□ -1.79
CDC40-204ENST00000431461 CAPN6Q9Y6Q1 641 aa3.9□□□□□ -1.79
CDC40-204ENST00000431461 MYOCOSA0A1B0GUC4 107 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 ZC3H12DA2A288 527 aaKnown RBP3.89□□□□□ -1.79
CDC40-204ENST00000431461 OTOL1A6NHN0 477 aaPredicted RBP3.89□□□□□ -1.79
CDC40-204ENST00000431461 PAGE1O75459 146 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 GSTT1P30711 240 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 GALK1P51570 392 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 PLCB3Q01970 1234 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 KCNA1Q09470 495 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 DSC3Q14574 896 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 INPP5AQ14642 412 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 NR0B2Q15466 257 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 VMACQ2NL98 169 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 TMC7Q7Z402 723 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 SP8Q8IXZ3 490 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 PDZD8Q8NEN9 1154 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 RIN3Q8TB24 985 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 ELMO3Q96BJ8 720 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 WNT10AQ9GZT5 417 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 PPM1HQ9ULR3 514 aa3.89□□□□□ -1.79
CDC40-204ENST00000431461 AKAP8O43823 692 aaKnown RBP3.88□□□□□ -1.79
CDC40-204ENST00000431461 KIR3DL1P43629 444 aa3.88□□□□□ -1.79
CDC40-204ENST00000431461 SSPNQ14714 243 aa3.88□□□□□ -1.79
CDC40-204ENST00000431461 SNX17Q15036 470 aa3.88□□□□□ -1.79
CDC40-204ENST00000431461 ENOX2Q16206 610 aaKnown RBP3.88□□□□□ -1.79
CDC40-204ENST00000431461 TIGD5Q53EQ6 642 aa3.88□□□□□ -1.79
CDC40-204ENST00000431461 RASIP1Q5U651 963 aa3.88□□□□□ -1.79
CDC40-204ENST00000431461 TPTE2Q6XPS3 522 aa3.88□□□□□ -1.79
CDC40-204ENST00000431461 CREG2Q8IUH2 290 aa3.88□□□□□ -1.79
CDC40-204ENST00000431461 HID1Q8IV36 788 aa3.88□□□□□ -1.79
CDC40-204ENST00000431461 RETREG2Q8NC44 543 aa3.88□□□□□ -1.79
CDC40-204ENST00000431461 FEZF2Q8TBJ5 459 aa3.88□□□□□ -1.79
CDC40-204ENST00000431461 FBRSQ9HAH7 460 aa3.88□□□□□ -1.79
CDC40-204ENST00000431461 GCM1Q9NP62 436 aa3.88□□□□□ -1.79
CDC40-204ENST00000431461 SNCAIPQ9Y6H5 919 aa3.88□□□□□ -1.79
CDC40-204ENST00000431461 ZBTB7CA1YPR0 619 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 HRKO00198 91 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 GIPC1O14908 333 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 FBXO24O75426 580 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 ESR1P03372 595 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 CYP7A1P22680 504 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 PDE6BP35913 854 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 NKG7Q16617 165 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 LETMD1Q6P1Q0 360 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 LRFN4Q6PJG9 635 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 HDXQ7Z353 690 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 FRMD5Q7Z6J6 570 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 OXR1Q8N573 874 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 PIWIL2Q8TC59 973 aaKnown RBP3.87□□□□□ -1.79
CDC40-204ENST00000431461 PANK1Q8TE04 598 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 DACT3Q96B18 629 aaPredicted RBP3.87□□□□□ -1.79
CDC40-204ENST00000431461 SIGLEC10Q96LC7 697 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 ADAM7Q9H2U9 754 aa3.87□□□□□ -1.79
CDC40-204ENST00000431461 PNMA6FA0A0J9YX94 578 aa3.86□□□□□ -1.79
CDC40-204ENST00000431461 FITM1A5D6W6 292 aa3.86□□□□□ -1.79
CDC40-204ENST00000431461 CST3P01034 146 aaPredicted RBP3.86□□□□□ -1.79
CDC40-204ENST00000431461 PI3P19957 117 aa3.86□□□□□ -1.79
CDC40-204ENST00000431461 TNK2Q07912 1038 aa3.86□□□□□ -1.79
CDC40-204ENST00000431461 SYT8Q8NBV8 401 aa3.86□□□□□ -1.79
CDC40-204ENST00000431461 PLPPR2Q96GM1 343 aa3.86□□□□□ -1.79
CDC40-204ENST00000431461 OSBPL7Q9BZF2 842 aa3.86□□□□□ -1.79
CDC40-204ENST00000431461 SP110Q9HB58 689 aa3.86□□□□□ -1.79
CDC40-204ENST00000431461 LUC7LQ9NQ29 371 aaKnown RBP3.86□□□□□ -1.79
CDC40-204ENST00000431461 DCTN4Q9UJW0 460 aa3.86□□□□□ -1.79
CDC40-204ENST00000431461 PALD1Q9ULE6 856 aa3.86□□□□□ -1.79
CDC40-204ENST00000431461 YBX2Q9Y2T7 364 aaKnown RBP3.86□□□□□ -1.79
CDC40-204ENST00000431461 TREHO43280 583 aa3.85□□□□□ -1.79
CDC40-204ENST00000431461 INSRRP14616 1297 aa3.85□□□□□ -1.79
CDC40-204ENST00000431461 AFF3P51826 1226 aaKnown RBP3.85□□□□□ -1.79
CDC40-204ENST00000431461 PLP2Q04941 152 aa3.85□□□□□ -1.79
CDC40-204ENST00000431461 PTPN11Q06124 597 aaPredicted RBP3.85□□□□□ -1.79
CDC40-204ENST00000431461 PUM1Q14671 1186 aaKnown RBP eCLIP3.85□□□□□ -1.79
CDC40-204ENST00000431461 CDH24Q86UP0 819 aa3.85□□□□□ -1.79
CDC40-204ENST00000431461 SIRT2Q8IXJ6 389 aa3.85□□□□□ -1.79
CDC40-204ENST00000431461 FBF1Q8TES7 1133 aa3.85□□□□□ -1.79
CDC40-204ENST00000431461 INTS4Q96HW7 963 aaKnown RBP3.85□□□□□ -1.79
CDC40-204ENST00000431461 GPR20Q99678 358 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms