RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 TDO2P48775 406 aa11.75□□□□□ -0.53
HDAC6-207ENST00000430858 CDK8P49336 464 aa11.75□□□□□ -0.53
HDAC6-207ENST00000430858 FCGRTP55899 365 aa11.75□□□□□ -0.53
HDAC6-207ENST00000430858 SEPT2Q15019 361 aa11.75□□□□□ -0.53
HDAC6-207ENST00000430858 FAM110CQ1W6H9 321 aa11.75□□□□□ -0.53
HDAC6-207ENST00000430858 NACAP1Q9BZK3 213 aa11.75□□□□□ -0.53
HDAC6-207ENST00000430858 PTPRFP10586 1907 aa11.75□□□□□ -0.53
HDAC6-207ENST00000430858 CTGFP29279 349 aa11.74□□□□□ -0.53
HDAC6-207ENST00000430858 IRX6P78412 446 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-207ENST00000430858 PLEKHM2Q8IWE5 1019 aa11.74□□□□□ -0.53
HDAC6-207ENST00000430858 IFNL3Q8IZI9 196 aa11.74□□□□□ -0.53
HDAC6-207ENST00000430858 ANKRD13CQ8N6S4 541 aa11.74□□□□□ -0.53
HDAC6-207ENST00000430858 ACER1Q8TDN7 264 aa11.74□□□□□ -0.53
HDAC6-207ENST00000430858 GTF3C2Q8WUA4 911 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-207ENST00000430858 TRIM47Q96LD4 638 aa11.74□□□□□ -0.53
HDAC6-207ENST00000430858 SEC62Q99442 399 aaKnown RBP11.74□□□□□ -0.53
HDAC6-207ENST00000430858 EPB41L4AQ9HCS5 686 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-207ENST00000430858 SRRDQ9UH36 339 aa11.74□□□□□ -0.53
HDAC6-207ENST00000430858 LOC285556D6RIA3 1793 aa11.74□□□□□ -0.53
HDAC6-207ENST00000430858 MINDY4BA8MYZ0 360 aa11.73□□□□□ -0.53
HDAC6-207ENST00000430858 TRIM6-TRIM34B2RNG4 842 aa11.73□□□□□ -0.53
HDAC6-207ENST00000430858 SMIM22K7EJ46 135 aa11.73□□□□□ -0.53
HDAC6-207ENST00000430858 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-207ENST00000430858 AKR1B1P15121 316 aa11.73□□□□□ -0.53
HDAC6-207ENST00000430858 RGS19P49795 217 aa11.73□□□□□ -0.53
HDAC6-207ENST00000430858 ZYXQ15942 572 aaKnown RBP11.73□□□□□ -0.53
HDAC6-207ENST00000430858 NBPF11Q86T75 865 aa11.73□□□□□ -0.53
HDAC6-207ENST00000430858 ARMC5Q96C12 935 aa11.73□□□□□ -0.53
HDAC6-207ENST00000430858 ROBO3Q96MS0 1386 aa11.73□□□□□ -0.53
HDAC6-207ENST00000430858 NAPBQ9H115 298 aa11.73□□□□□ -0.53
HDAC6-207ENST00000430858 ZNF287Q9HBT7 754 aa11.73□□□□□ -0.53
HDAC6-207ENST00000430858 HELLSQ9NRZ9 838 aa11.73□□□□□ -0.53
HDAC6-207ENST00000430858 PTCH2Q9Y6C5 1203 aa11.73□□□□□ -0.53
HDAC6-207ENST00000430858 MYPNQ86TC9 1320 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 A0A1W2PRG0 241 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 USP17L15C9J2P7 530 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 USP17L13C9JLJ4 530 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 USP17L11C9JVI0 530 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 USP17L18D6R9N7 530 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 USP17L22D6RA61 530 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 USP17L17D6RBQ6 530 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 USP17L19D6RCP7 530 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 USP17L20D6RJB6 530 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 VCAM1P19320 739 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 HERVK_113P62684 666 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 ICA1Q05084 483 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 USP17L24Q0WX57 530 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 SLC9C1Q4G0N8 1177 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 CATSPERGQ6ZRH7 1159 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 RILPL2Q969X0 211 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 P2RX7Q99572 595 aaKnown RBP11.72□□□□□ -0.53
HDAC6-207ENST00000430858 SH2D4AQ9H788 454 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 KANSL2Q9H9L4 492 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 MKNK2Q9HBH9 465 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 ARHGEF10LQ9HCE6 1279 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 MORF4L1Q9UBU8 362 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 TMX2Q9Y320 296 aa11.72□□□□□ -0.53
HDAC6-207ENST00000430858 TNPO2O14787 897 aaKnown RBP11.71□□□□□ -0.53
HDAC6-207ENST00000430858 SLC3A2P08195 630 aaKnown RBP11.71□□□□□ -0.53
HDAC6-207ENST00000430858 SOX10P56693 466 aa11.71□□□□□ -0.53
HDAC6-207ENST00000430858 MCMDC2Q4G0Z9 681 aa11.71□□□□□ -0.53
HDAC6-207ENST00000430858 CCDC129Q6ZRS4 1044 aa11.71□□□□□ -0.53
HDAC6-207ENST00000430858 SIAH1Q8IUQ4 282 aa11.71□□□□□ -0.53
HDAC6-207ENST00000430858 GPRC5AQ8NFJ5 357 aa11.71□□□□□ -0.53
HDAC6-207ENST00000430858 RAET1EQ8TD07 263 aa11.71□□□□□ -0.53
HDAC6-207ENST00000430858 LPAR1Q92633 364 aa11.71□□□□□ -0.53
HDAC6-207ENST00000430858 COA7Q96BR5 231 aa11.71□□□□□ -0.53
HDAC6-207ENST00000430858 BAZ2AQ9UIF9 1905 aaKnown RBP11.7□□□□□ -0.54
HDAC6-207ENST00000430858 SDSP20132 328 aa11.7□□□□□ -0.54
HDAC6-207ENST00000430858 RASA1P20936 1047 aa11.7□□□□□ -0.54
HDAC6-207ENST00000430858 PRKCZQ05513 592 aa11.7□□□□□ -0.54
HDAC6-207ENST00000430858 PDE4BQ07343 736 aa11.7□□□□□ -0.54
HDAC6-207ENST00000430858 LBX2Q6XYB7 198 aa11.7□□□□□ -0.54
HDAC6-207ENST00000430858 ZNF444Q8N0Y2 327 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-207ENST00000430858 STK11IPQ8N1F8 1099 aa11.7□□□□□ -0.54
HDAC6-207ENST00000430858 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
HDAC6-207ENST00000430858 FAM227BQ96M60 508 aa11.7□□□□□ -0.54
HDAC6-207ENST00000430858 RPAP3Q9H6T3 665 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-207ENST00000430858 TXNRD2Q9NNW7 524 aa11.7□□□□□ -0.54
HDAC6-207ENST00000430858 RBPJLQ9UBG7 517 aa11.7□□□□□ -0.54
HDAC6-207ENST00000430858 A0A0D9SFI3 127 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 HIP1O00291 1037 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 FOXP2O15409 715 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 EEF2P13639 858 aaKnown RBP11.69□□□□□ -0.54
HDAC6-207ENST00000430858 GRK4P32298 578 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 FLT3LGP49771 235 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 MFAP1P55081 439 aaKnown RBP11.69□□□□□ -0.54
HDAC6-207ENST00000430858 ERVK-9P63128 1117 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 ERVK-24P63145 666 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 MLLT1Q03111 559 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-207ENST00000430858 PPARAQ07869 468 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 NMIQ13287 307 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-207ENST00000430858 IRF5Q13568 498 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 ALX1Q15699 326 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 VPS53Q5VIR6 699 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 CLEC10AQ8IUN9 316 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.69□□□□□ -0.54
HDAC6-207ENST00000430858 VCPKMTQ9H867 229 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 HOXC10Q9NYD6 342 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 GABRQQ9UN88 632 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 493.7 ms