RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 SOCS4Q8WXH5 440 aa9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 GDF15Q99988 308 aa9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 TBC1D2Q9BYX2 928 aa9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 AS3MTQ9HBK9 375 aa9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 TMOD4Q9NZQ9 345 aa9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 CEP126Q9P2H0 1117 aa9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 ABCF2Q9UG63 623 aa9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 NBPF7P0C2Y1 421 aaPredicted RBP9.72□□□□□ -0.85
ECHDC1-207ENST00000430841 PRDX5P30044 214 aa9.72□□□□□ -0.85
ECHDC1-207ENST00000430841 ZNF697Q5TEC3 545 aa9.72□□□□□ -0.85
ECHDC1-207ENST00000430841 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.72□□□□□ -0.85
ECHDC1-207ENST00000430841 MRS2Q9HD23 443 aa9.72□□□□□ -0.85
ECHDC1-207ENST00000430841 HDAC5Q9UQL6 1122 aa9.72□□□□□ -0.85
ECHDC1-207ENST00000430841 AFG3L2Q9Y4W6 797 aa9.72□□□□□ -0.85
ECHDC1-207ENST00000430841 MYH2Q9UKX2 1941 aa9.72□□□□□ -0.85
ECHDC1-207ENST00000430841 EYA2O00167 538 aa9.71□□□□□ -0.86
ECHDC1-207ENST00000430841 DPYSL4O14531 572 aa9.71□□□□□ -0.86
ECHDC1-207ENST00000430841 GSTO1P78417 241 aa9.71□□□□□ -0.86
ECHDC1-207ENST00000430841 MOGSQ13724 837 aa9.71□□□□□ -0.86
ECHDC1-207ENST00000430841 KLHDC4Q8TBB5 520 aa9.71□□□□□ -0.86
ECHDC1-207ENST00000430841 DDX12PQ92771 950 aa9.71□□□□□ -0.86
ECHDC1-207ENST00000430841 NUDT12Q9BQG2 462 aa9.71□□□□□ -0.86
ECHDC1-207ENST00000430841 SIL1Q9H173 461 aa9.71□□□□□ -0.86
ECHDC1-207ENST00000430841 PTPRFP10586 1907 aa9.71□□□□□ -0.86
ECHDC1-207ENST00000430841 ALPK3Q96L96 1907 aa9.71□□□□□ -0.86
ECHDC1-207ENST00000430841 GLRX3O76003 335 aaKnown RBP9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 CYP2B6P20813 491 aa9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 BTDP43251 543 aa9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 HMGCS2P54868 508 aa9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 MDM2Q00987 491 aaPredicted RBP9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 RABL6Q3YEC7 729 aaPredicted RBP9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 GORABQ5T7V8 394 aa9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 VGLL2Q8N8G2 317 aa9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 ZNF280CQ8ND82 737 aa9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 IDI2Q9BXS1 227 aa9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 OSBPL5Q9H0X9 879 aaPredicted RBP9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 MTMR10Q9NXD2 777 aa9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 PTPRCP08575 1304 aa9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 COL6A3P12111 3177 aa9.7□□□□□ -0.86
ECHDC1-207ENST00000430841 UTYO14607 1347 aa9.69□□□□□ -0.86
ECHDC1-207ENST00000430841 LDHCP07864 332 aa9.69□□□□□ -0.86
ECHDC1-207ENST00000430841 UBTFL1P0CB47 393 aaPredicted RBP9.69□□□□□ -0.86
ECHDC1-207ENST00000430841 SPP2Q13103 211 aa9.69□□□□□ -0.86
ECHDC1-207ENST00000430841 TREML2Q5T2D2 321 aa9.69□□□□□ -0.86
ECHDC1-207ENST00000430841 WDR78Q5VTH9 848 aa9.69□□□□□ -0.86
ECHDC1-207ENST00000430841 GPIHBP1Q8IV16 184 aa9.69□□□□□ -0.86
ECHDC1-207ENST00000430841 CRACR2BQ8N4Y2 399 aaPredicted RBP9.69□□□□□ -0.86
ECHDC1-207ENST00000430841 GTF3C2Q8WUA4 911 aaPredicted RBP9.69□□□□□ -0.86
ECHDC1-207ENST00000430841 FAM161BQ96MY7 647 aa9.69□□□□□ -0.86
ECHDC1-207ENST00000430841 COL25A1Q9BXS0 654 aaPredicted RBP9.69□□□□□ -0.86
ECHDC1-207ENST00000430841 ASCC2Q9H1I8 757 aaPredicted RBP9.69□□□□□ -0.86
ECHDC1-207ENST00000430841 SALL1Q9NSC2 1324 aa9.69□□□□□ -0.86
ECHDC1-207ENST00000430841 ATAD5Q96QE3 1844 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 LOC285556D6RIA3 1793 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 MROH7-TTC4A0A0A0MT08 1334 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 USP17L5A8MUK1 530 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 PHF20L1A8MW92 1017 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 FGFR2P21802 821 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 MAPK4P31152 587 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 RGS2P41220 211 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 MFSD14CQ5VZR4 134 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 CCDC84Q86UT8 332 aaPredicted RBP9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 ANKRD44Q8N8A2 993 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 GPRC5AQ8NFJ5 357 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 PAGR1Q9BTK6 254 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 OGDHLQ9ULD0 1010 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 IVNS1ABPQ9Y6Y0 642 aa9.68□□□□□ -0.86
ECHDC1-207ENST00000430841 CNGA1P29973 690 aa9.67□□□□□ -0.86
ECHDC1-207ENST00000430841 IL15P40933 162 aaPredicted RBP9.67□□□□□ -0.86
ECHDC1-207ENST00000430841 CCNA1P78396 465 aa9.67□□□□□ -0.86
ECHDC1-207ENST00000430841 MVPQ14764 893 aaKnown RBP9.67□□□□□ -0.86
ECHDC1-207ENST00000430841 PACS2Q86VP3 889 aa9.67□□□□□ -0.86
ECHDC1-207ENST00000430841 ZFPM1Q8IX07 1006 aa9.67□□□□□ -0.86
ECHDC1-207ENST00000430841 TRIB2Q92519 343 aa9.67□□□□□ -0.86
ECHDC1-207ENST00000430841 SYMPKQ92797 1274 aaKnown RBP9.67□□□□□ -0.86
ECHDC1-207ENST00000430841 KAZALD1Q96I82 304 aa9.67□□□□□ -0.86
ECHDC1-207ENST00000430841 FEZ1Q99689 392 aa9.67□□□□□ -0.86
ECHDC1-207ENST00000430841 APBA2Q99767 749 aa9.67□□□□□ -0.86
ECHDC1-207ENST00000430841 RAI14Q9P0K7 980 aa9.67□□□□□ -0.86
ECHDC1-207ENST00000430841 HERC5Q9UII4 1024 aaKnown RBP9.67□□□□□ -0.86
ECHDC1-207ENST00000430841 ATRNL1Q5VV63 1379 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 PHIPQ8WWQ0 1821 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 GAKO14976 1311 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 DDTLA6NHG4 134 aaPredicted RBP9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 FAM196BA6NMK8 535 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 ANP32CO43423 234 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 MSCO60682 206 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 CIAO1O76071 339 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 MAP4K4O95819 1239 aaPredicted RBP9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 ASNSP08243 561 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 XRCC5P13010 732 aaKnown RBP9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 PHKA1P46020 1223 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 TRIM32Q13049 653 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 MTMR2Q13614 643 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 FAM109BQ6ICB4 259 aaPredicted RBP9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 ATF7IPQ6VMQ6 1270 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 TEX11Q8IYF3 940 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 MAFAQ8NHW3 353 aaPredicted RBP9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 CDCA7LQ96GN5 454 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 PRDM5Q9NQX1 630 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms