RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 KHSRPQ92945 711 aaKnown RBP eCLIP12.41□□□□□ -0.423e-7■■□□□ 12.3
ATG4B-212ENST00000430617 FERMT2Q96AC1 680 aa12.41□□□□□ -0.42
ATG4B-212ENST00000430617 EDC3Q96F86 508 aaKnown RBP12.41□□□□□ -0.42
ATG4B-212ENST00000430617 PBX4Q9BYU1 374 aa12.41□□□□□ -0.42
ATG4B-212ENST00000430617 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.41□□□□□ -0.42
ATG4B-212ENST00000430617 MYO5AQ9Y4I1 1855 aaKnown RBP12.4□□□□□ -0.42
ATG4B-212ENST00000430617 MSCO60682 206 aa12.4□□□□□ -0.42
ATG4B-212ENST00000430617 IGHA2P01877 340 aa12.4□□□□□ -0.42
ATG4B-212ENST00000430617 IGFBP4P22692 258 aa12.4□□□□□ -0.42
ATG4B-212ENST00000430617 ADCYAP1R1P41586 468 aa12.4□□□□□ -0.42
ATG4B-212ENST00000430617 TMEM31Q5JXX7 168 aa12.4□□□□□ -0.42
ATG4B-212ENST00000430617 NPLOC4Q8TAT6 608 aa12.4□□□□□ -0.42
ATG4B-212ENST00000430617 PAGR1Q9BTK6 254 aa12.4□□□□□ -0.42
ATG4B-212ENST00000430617 OSBPL5Q9H0X9 879 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-212ENST00000430617 ZBTB40Q9NUA8 1239 aa12.4□□□□□ -0.42
ATG4B-212ENST00000430617 C9orf78Q9NZ63 289 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-212ENST00000430617 CXXC1Q9P0U4 656 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-212ENST00000430617 GAKO14976 1311 aa12.39□□□□□ -0.43
ATG4B-212ENST00000430617 FAM86C2PA6NEL3 165 aa12.39□□□□□ -0.43
ATG4B-212ENST00000430617 USP17L5A8MUK1 530 aa12.39□□□□□ -0.43
ATG4B-212ENST00000430617 KBTBD13C9JR72 458 aa12.39□□□□□ -0.43
ATG4B-212ENST00000430617 MYCNP04198 464 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-212ENST00000430617 IFIT1P09914 478 aaKnown RBP12.39□□□□□ -0.43
ATG4B-212ENST00000430617 NBPF7P0C2Y1 421 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-212ENST00000430617 CYBAP13498 195 aa12.39□□□□□ -0.43
ATG4B-212ENST00000430617 CAP2P40123 477 aa12.39□□□□□ -0.43
ATG4B-212ENST00000430617 JAG1P78504 1218 aa12.39□□□□□ -0.43
ATG4B-212ENST00000430617 PUM3Q15397 648 aaKnown RBP12.39□□□□□ -0.43
ATG4B-212ENST00000430617 C1orf53Q5VUE5 145 aa12.39□□□□□ -0.43
ATG4B-212ENST00000430617 CCAR1Q8IX12 1150 aaKnown RBP12.39□□□□□ -0.43
ATG4B-212ENST00000430617 ARRDC4Q8NCT1 418 aa12.39□□□□□ -0.43
ATG4B-212ENST00000430617 BRWD1Q9NSI6 2320 aa12.39□□□□□ -0.43
ATG4B-212ENST00000430617 COL11A1P12107 1806 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-212ENST00000430617 KIAA0355O15063 1070 aa12.38□□□□□ -0.43
ATG4B-212ENST00000430617 CNMDO75829 334 aa12.38□□□□□ -0.43
ATG4B-212ENST00000430617 CLTBP09497 229 aa12.38□□□□□ -0.43
ATG4B-212ENST00000430617 MRE11P49959 708 aa12.38□□□□□ -0.43
ATG4B-212ENST00000430617 BACE1P56817 501 aa12.38□□□□□ -0.43
ATG4B-212ENST00000430617 FPGSQ05932 587 aa12.38□□□□□ -0.43
ATG4B-212ENST00000430617 SHROOM1Q2M3G4 852 aaPredicted RBP12.38□□□□□ -0.43
ATG4B-212ENST00000430617 SLC4A10Q6U841 1118 aa12.38□□□□□ -0.43
ATG4B-212ENST00000430617 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.38□□□□□ -0.435e-7■□□□□ 10.9
ATG4B-212ENST00000430617 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
ATG4B-212ENST00000430617 BICC1Q9H694 974 aaKnown RBP12.38□□□□□ -0.43
ATG4B-212ENST00000430617 TACC3Q9Y6A5 838 aa12.38□□□□□ -0.43
ATG4B-212ENST00000430617 MYH1P12882 1939 aa12.38□□□□□ -0.43
ATG4B-212ENST00000430617 SALL1Q9NSC2 1324 aa12.37□□□□□ -0.43
ATG4B-212ENST00000430617 USP34Q70CQ2 3546 aa12.37□□□□□ -0.43
ATG4B-212ENST00000430617 PARP14Q460N5 1801 aa12.37□□□□□ -0.43
ATG4B-212ENST00000430617 RAG1P15918 1043 aa12.37□□□□□ -0.43
ATG4B-212ENST00000430617 ATP2B2Q01814 1243 aa12.37□□□□□ -0.43
ATG4B-212ENST00000430617 B4GALNT3Q6L9W6 998 aa12.37□□□□□ -0.43
ATG4B-212ENST00000430617 ANKRD44Q8N8A2 993 aa12.37□□□□□ -0.43
ATG4B-212ENST00000430617 MEIS3Q99687 375 aa12.37□□□□□ -0.43
ATG4B-212ENST00000430617 WDR18Q9BV38 432 aa12.37□□□□□ -0.43
ATG4B-212ENST00000430617 SLC15A5A6NIM6 579 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 GPR37L1O60883 481 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 ALDH1L1O75891 902 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 HOXC6P09630 235 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 PTPREP23469 700 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 BTDP43251 543 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 RHBDL3P58872 404 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 LRRC41Q15345 812 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 RABL6Q3YEC7 729 aaPredicted RBP12.36□□□□□ -0.43
ATG4B-212ENST00000430617 CCDC129Q6ZRS4 1044 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 C16orf59Q7L2K0 433 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 SRCIN1Q9C0H9 1055 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 CHMP4BQ9H444 224 aaKnown RBP12.36□□□□□ -0.43
ATG4B-212ENST00000430617 AS3MTQ9HBK9 375 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 TMOD4Q9NZQ9 345 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 PCDHB15Q9Y5E8 787 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 A0A0G2JMZ2 1700 aa12.36□□□□□ -0.43
ATG4B-212ENST00000430617 SLC5A1P13866 664 aa12.35□□□□□ -0.43
ATG4B-212ENST00000430617 GRB14Q14449 540 aa12.35□□□□□ -0.43
ATG4B-212ENST00000430617 RASIP1Q5U651 963 aa12.35□□□□□ -0.43
ATG4B-212ENST00000430617 WDR78Q5VTH9 848 aa12.35□□□□□ -0.43
ATG4B-212ENST00000430617 LPIN2Q92539 896 aa12.35□□□□□ -0.43
ATG4B-212ENST00000430617 CCDC136Q96JN2 1154 aa12.35□□□□□ -0.43
ATG4B-212ENST00000430617 CWC22Q9HCG8 908 aaKnown RBP12.35□□□□□ -0.43
ATG4B-212ENST00000430617 MCM3APO60318 1980 aa12.34□□□□□ -0.43
ATG4B-212ENST00000430617 CACNA1AO00555 2505 aa12.34□□□□□ -0.43
ATG4B-212ENST00000430617 PQBP1O60828 265 aaKnown RBP12.34□□□□□ -0.43
ATG4B-212ENST00000430617 FAAP100Q0VG06 881 aa12.34□□□□□ -0.43
ATG4B-212ENST00000430617 FAM47AQ5JRC9 791 aa12.34□□□□□ -0.43
ATG4B-212ENST00000430617 PRAMEF19Q5SWL8 479 aa12.34□□□□□ -0.43
ATG4B-212ENST00000430617 MICALL1Q8N3F8 863 aa12.34□□□□□ -0.43
ATG4B-212ENST00000430617 ZNF384Q8TF68 577 aa12.34□□□□□ -0.43
ATG4B-212ENST00000430617 C1orf115Q9H7X2 142 aa12.34□□□□□ -0.43
ATG4B-212ENST00000430617 EMILIN3Q9NT22 766 aa12.34□□□□□ -0.43
ATG4B-212ENST00000430617 TMEM39AQ9NV64 488 aa12.34□□□□□ -0.43
ATG4B-212ENST00000430617 CFAP54Q96N23 3096 aa12.34□□□□□ -0.43
ATG4B-212ENST00000430617 MROH7-TTC4A0A0A0MT08 1334 aa12.34□□□□□ -0.43
ATG4B-212ENST00000430617 ZNF318Q5VUA4 2279 aa12.34□□□□□ -0.43
ATG4B-212ENST00000430617 C19orf81C9J6K1 198 aa12.33□□□□□ -0.44
ATG4B-212ENST00000430617 SEPT4O43236 478 aa12.33□□□□□ -0.44
ATG4B-212ENST00000430617 PHKA1P46020 1223 aa12.33□□□□□ -0.44
ATG4B-212ENST00000430617 TMEM240Q5SV17 173 aa12.33□□□□□ -0.44
ATG4B-212ENST00000430617 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-212ENST00000430617 USP44Q9H0E7 712 aa12.33□□□□□ -0.44
ATG4B-212ENST00000430617 NKX2-4Q9H2Z4 354 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms