RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 TLE2Q04725 743 aa12.43□□□□□ -0.42
ATG4B-211ENST00000429899 SKIV2LQ15477 1246 aaKnown RBP12.43□□□□□ -0.42
ATG4B-211ENST00000429899 MFSD14CQ5VZR4 134 aa12.43□□□□□ -0.42
ATG4B-211ENST00000429899 ANO1Q5XXA6 986 aa12.43□□□□□ -0.42
ATG4B-211ENST00000429899 ITPRIPQ8IWB1 547 aa12.43□□□□□ -0.42
ATG4B-211ENST00000429899 SUCLG2Q96I99 432 aa12.43□□□□□ -0.42
ATG4B-211ENST00000429899 CWC22Q9HCG8 908 aaKnown RBP12.43□□□□□ -0.42
ATG4B-211ENST00000429899 DDX19BQ9UMR2 479 aa12.43□□□□□ -0.42
ATG4B-211ENST00000429899 NDUFB9Q9Y6M9 179 aa12.43□□□□□ -0.42
ATG4B-211ENST00000429899 ADCYAP1R1P41586 468 aa12.42□□□□□ -0.42
ATG4B-211ENST00000429899 ERVK-9P63128 1117 aa12.42□□□□□ -0.42
ATG4B-211ENST00000429899 ERVK-24P63145 666 aa12.42□□□□□ -0.42
ATG4B-211ENST00000429899 NHLH1Q02575 133 aa12.42□□□□□ -0.42
ATG4B-211ENST00000429899 MAP2K5Q13163 448 aa12.42□□□□□ -0.42
ATG4B-211ENST00000429899 PICALMQ13492 652 aa12.42□□□□□ -0.42
ATG4B-211ENST00000429899 AAMPQ13685 434 aa12.42□□□□□ -0.42
ATG4B-211ENST00000429899 PLEKHH3Q7Z736 793 aa12.42□□□□□ -0.42
ATG4B-211ENST00000429899 ARRDC4Q8NCT1 418 aa12.42□□□□□ -0.42
ATG4B-211ENST00000429899 KLHDC4Q8TBB5 520 aa12.42□□□□□ -0.42
ATG4B-211ENST00000429899 ZNF236Q9UL36 1845 aa12.41□□□□□ -0.42
ATG4B-211ENST00000429899 UTYO14607 1347 aa12.41□□□□□ -0.42
ATG4B-211ENST00000429899 TBC1D12O60347 775 aa12.41□□□□□ -0.42
ATG4B-211ENST00000429899 LDHBP07195 334 aaKnown RBP12.41□□□□□ -0.42
ATG4B-211ENST00000429899 CLTBP09497 229 aa12.41□□□□□ -0.42
ATG4B-211ENST00000429899 HOXA7P31268 230 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-211ENST00000429899 CYP2C19P33261 490 aa12.41□□□□□ -0.42
ATG4B-211ENST00000429899 MTMR2Q13614 643 aa12.41□□□□□ -0.42
ATG4B-211ENST00000429899 EDC3Q96F86 508 aaKnown RBP12.41□□□□□ -0.42
ATG4B-211ENST00000429899 UIMC1Q96RL1 719 aa12.41□□□□□ -0.42
ATG4B-211ENST00000429899 PAGR1Q9BTK6 254 aa12.41□□□□□ -0.42
ATG4B-211ENST00000429899 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.41□□□□□ -0.42
ATG4B-211ENST00000429899 TACC3Q9Y6A5 838 aa12.41□□□□□ -0.42
ATG4B-211ENST00000429899 MYO5AQ9Y4I1 1855 aaKnown RBP12.4□□□□□ -0.42
ATG4B-211ENST00000429899 IGHA2P01877 340 aa12.4□□□□□ -0.42
ATG4B-211ENST00000429899 NPLOC4Q8TAT6 608 aa12.4□□□□□ -0.42
ATG4B-211ENST00000429899 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.4□□□□□ -0.427e-22■□□□□ 10.1
ATG4B-211ENST00000429899 OSBPL5Q9H0X9 879 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-211ENST00000429899 ZBTB40Q9NUA8 1239 aa12.4□□□□□ -0.42
ATG4B-211ENST00000429899 C9orf78Q9NZ63 289 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-211ENST00000429899 GAKO14976 1311 aa12.39□□□□□ -0.43
ATG4B-211ENST00000429899 USP17L5A8MUK1 530 aa12.39□□□□□ -0.43
ATG4B-211ENST00000429899 KIAA0355O15063 1070 aa12.39□□□□□ -0.43
ATG4B-211ENST00000429899 IFIT1P09914 478 aaKnown RBP12.39□□□□□ -0.43
ATG4B-211ENST00000429899 NBPF7P0C2Y1 421 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-211ENST00000429899 CYBAP13498 195 aa12.39□□□□□ -0.43
ATG4B-211ENST00000429899 CAP2P40123 477 aa12.39□□□□□ -0.43
ATG4B-211ENST00000429899 JAG1P78504 1218 aa12.39□□□□□ -0.43
ATG4B-211ENST00000429899 ATP2B2Q01814 1243 aa12.39□□□□□ -0.43
ATG4B-211ENST00000429899 PUM3Q15397 648 aaKnown RBP12.39□□□□□ -0.43
ATG4B-211ENST00000429899 C1orf53Q5VUE5 145 aa12.39□□□□□ -0.43
ATG4B-211ENST00000429899 BRWD1Q9NSI6 2320 aa12.39□□□□□ -0.43
ATG4B-211ENST00000429899 COL11A1P12107 1806 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-211ENST00000429899 ERC2O15083 957 aa12.38□□□□□ -0.43
ATG4B-211ENST00000429899 PQBP1O60828 265 aaKnown RBP12.38□□□□□ -0.43
ATG4B-211ENST00000429899 CNMDO75829 334 aa12.38□□□□□ -0.43
ATG4B-211ENST00000429899 BACE1P56817 501 aa12.38□□□□□ -0.43
ATG4B-211ENST00000429899 SHROOM1Q2M3G4 852 aaPredicted RBP12.38□□□□□ -0.43
ATG4B-211ENST00000429899 WDR78Q5VTH9 848 aa12.38□□□□□ -0.43
ATG4B-211ENST00000429899 SLC4A10Q6U841 1118 aa12.38□□□□□ -0.43
ATG4B-211ENST00000429899 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
ATG4B-211ENST00000429899 NKX2-4Q9H2Z4 354 aa12.38□□□□□ -0.43
ATG4B-211ENST00000429899 BICC1Q9H694 974 aaKnown RBP12.38□□□□□ -0.43
ATG4B-211ENST00000429899 TMEM39AQ9NV64 488 aa12.38□□□□□ -0.43
ATG4B-211ENST00000429899 MSRAQ9UJ68 235 aa12.38□□□□□ -0.43
ATG4B-211ENST00000429899 ZDBF2Q9HCK1 2354 aa12.38□□□□□ -0.43
ATG4B-211ENST00000429899 MYH1P12882 1939 aa12.38□□□□□ -0.43
ATG4B-211ENST00000429899 SALL1Q9NSC2 1324 aa12.37□□□□□ -0.43
ATG4B-211ENST00000429899 USP34Q70CQ2 3546 aa12.37□□□□□ -0.43
ATG4B-211ENST00000429899 PARP14Q460N5 1801 aa12.37□□□□□ -0.43
ATG4B-211ENST00000429899 PRR33A8MZF0 331 aa12.37□□□□□ -0.43
ATG4B-211ENST00000429899 PI4K2BG5E9Z4 385 aa12.37□□□□□ -0.43
ATG4B-211ENST00000429899 TLL1O43897 1013 aa12.37□□□□□ -0.43
ATG4B-211ENST00000429899 B4GALNT3Q6L9W6 998 aa12.37□□□□□ -0.43
ATG4B-211ENST00000429899 ANKRD44Q8N8A2 993 aa12.37□□□□□ -0.43
ATG4B-211ENST00000429899 MEIS3Q99687 375 aa12.37□□□□□ -0.43
ATG4B-211ENST00000429899 WDR18Q9BV38 432 aa12.37□□□□□ -0.43
ATG4B-211ENST00000429899 SLC15A5A6NIM6 579 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 ALDH1L1O75891 902 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 HOXC6P09630 235 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 PTPREP23469 700 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 BTDP43251 543 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 RHBDL3P58872 404 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 LRRC41Q15345 812 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 RABL6Q3YEC7 729 aaPredicted RBP12.36□□□□□ -0.43
ATG4B-211ENST00000429899 C16orf59Q7L2K0 433 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 HERVK_113Q902F9 699 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 FBXL18Q96ME1 805 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 SRCIN1Q9C0H9 1055 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 CHMP4BQ9H444 224 aaKnown RBP12.36□□□□□ -0.43
ATG4B-211ENST00000429899 SLC28A3Q9HAS3 691 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 AS3MTQ9HBK9 375 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 TMOD4Q9NZQ9 345 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 PCDHB15Q9Y5E8 787 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 A0A0G2JMZ2 1700 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 CFAP54Q96N23 3096 aa12.36□□□□□ -0.43
ATG4B-211ENST00000429899 GLRX3O76003 335 aaKnown RBP12.35□□□□□ -0.43
ATG4B-211ENST00000429899 SLC5A1P13866 664 aa12.35□□□□□ -0.43
ATG4B-211ENST00000429899 GRB14Q14449 540 aa12.35□□□□□ -0.43
ATG4B-211ENST00000429899 RAB30Q15771 203 aa12.35□□□□□ -0.43
ATG4B-211ENST00000429899 TMEM240Q5SV17 173 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms