RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 CDK8P49336 464 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 KANK3Q6NY19 840 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 STRBPQ96SI9 672 aaKnown RBP14.67□□□□□ -0.06
PTCH1-207ENST00000429896 DDR1Q08345 913 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 TMX1Q9H3N1 280 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 DISP2A7MBM2 1401 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 JAKMIP3Q5VZ66 844 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 BCL9LQ86UU0 1499 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 F13A1P00488 732 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 CCDC181Q5TID7 509 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 MCF2L2Q86YR7 1114 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 SPICE1Q8N0Z3 855 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 GOLGA8HP0CJ92 632 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 GIMAP6Q6P9H5 292 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 KRT25Q7Z3Z0 450 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 GRPEL1Q9HAV7 217 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 ZBTB21Q9ULJ3 1066 aa14.67□□□□□ -0.06
PTCH1-207ENST00000429896 NEBLO76041 1014 aa14.66□□□□□ -0.06
PTCH1-207ENST00000429896 TNPO1Q92973 898 aaKnown RBP14.66□□□□□ -0.06
PTCH1-207ENST00000429896 GPHNQ9NQX3 736 aaPredicted RBP14.66□□□□□ -0.06
PTCH1-207ENST00000429896 KLRF2D3W0D1 207 aa14.66□□□□□ -0.06
PTCH1-207ENST00000429896 TRIM21P19474 475 aaKnown RBP14.66□□□□□ -0.06
PTCH1-207ENST00000429896 RDXP35241 583 aaKnown RBP14.66□□□□□ -0.06
PTCH1-207ENST00000429896 STAT6P42226 847 aa14.66□□□□□ -0.06
PTCH1-207ENST00000429896 TAF3Q5VWG9 929 aa14.66□□□□□ -0.06
PTCH1-207ENST00000429896 PIK3AP1Q6ZUJ8 805 aa14.66□□□□□ -0.06
PTCH1-207ENST00000429896 WRNIP1Q96S55 665 aa14.66□□□□□ -0.06
PTCH1-207ENST00000429896 CYP2D7A0A087X1C5 515 aa14.66□□□□□ -0.06
PTCH1-207ENST00000429896 FANCBQ8NB91 859 aa14.66□□□□□ -0.06
PTCH1-207ENST00000429896 TTC16Q8NEE8 873 aa14.66□□□□□ -0.06
PTCH1-207ENST00000429896 PHKBQ93100 1093 aa14.66□□□□□ -0.06
PTCH1-207ENST00000429896 SMTNL1A8MU46 457 aa14.66□□□□□ -0.06
PTCH1-207ENST00000429896 FBXO11Q86XK2 927 aa14.66□□□□□ -0.06
PTCH1-207ENST00000429896 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
PTCH1-207ENST00000429896 ASNSP08243 561 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 MAPK8IP2Q13387 824 aaPredicted RBP14.65□□□□□ -0.06
PTCH1-207ENST00000429896 ASPRV1Q53RT3 343 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 GPATCH4Q5T3I0 446 aaKnown RBP14.65□□□□□ -0.06
PTCH1-207ENST00000429896 TMEM179Q6ZVK1 233 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 ZNF274Q96GC6 653 aaPredicted RBP14.65□□□□□ -0.06
PTCH1-207ENST00000429896 FHDC1Q9C0D6 1143 aaPredicted RBP14.65□□□□□ -0.06
PTCH1-207ENST00000429896 CTAGE5O15320 804 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 NONOQ15233 471 aaKnown RBP eCLIP14.65□□□□□ -0.06
PTCH1-207ENST00000429896 DNAI2Q9GZS0 605 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 MYO6Q9UM54 1294 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 IGSF3O75054 1194 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 RFX5P48382 616 aaPredicted RBP14.65□□□□□ -0.06
PTCH1-207ENST00000429896 NT5C2P49902 561 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 FBXO33Q7Z6M2 555 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 PNMA8AQ86V59 439 aaPredicted RBP14.65□□□□□ -0.06
PTCH1-207ENST00000429896 PPFIBP1Q86W92 1011 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 ANKRD35Q8N283 1001 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 AGBL3Q8NEM8 1001 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 CCPG1Q9ULG6 757 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 RGPD8O14715 1765 aaPredicted RBP14.65□□□□□ -0.06
PTCH1-207ENST00000429896 SCARF1Q14162 830 aa14.65□□□□□ -0.06
PTCH1-207ENST00000429896 NOP56O00567 594 aaKnown RBP14.64□□□□□ -0.07
PTCH1-207ENST00000429896 BICD1Q96G01 975 aa14.64□□□□□ -0.07
PTCH1-207ENST00000429896 GCOM1H8Y6P7 765 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-207ENST00000429896 POLR2MP0CAP2 368 aa14.64□□□□□ -0.07
PTCH1-207ENST00000429896 DTHD1Q6ZMT9 781 aa14.64□□□□□ -0.07
PTCH1-207ENST00000429896 SYCP3Q8IZU3 236 aa14.64□□□□□ -0.07
PTCH1-207ENST00000429896 ZMYM6O95789 1325 aa14.64□□□□□ -0.07
PTCH1-207ENST00000429896 CCNT1O60563 726 aaKnown RBP14.64□□□□□ -0.07
PTCH1-207ENST00000429896 ARHGEF16Q5VV41 709 aa14.64□□□□□ -0.07
PTCH1-207ENST00000429896 ZNF512BQ96KM6 892 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-207ENST00000429896 ZNHIT6Q9NWK9 470 aaKnown RBP14.64□□□□□ -0.07
PTCH1-207ENST00000429896 FGFR1OPO95684 399 aaKnown RBP14.64□□□□□ -0.07
PTCH1-207ENST00000429896 MARCKSP29966 332 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-207ENST00000429896 KCTD2Q14681 263 aa14.64□□□□□ -0.07
PTCH1-207ENST00000429896 GDPD2Q9HCC8 539 aa14.64□□□□□ -0.07
PTCH1-207ENST00000429896 POLLQ9UGP5 575 aa14.64□□□□□ -0.07
PTCH1-207ENST00000429896 RASSF7Q02833 373 aa14.64□□□□□ -0.07
PTCH1-207ENST00000429896 RFX7Q2KHR2 1363 aa14.64□□□□□ -0.07
PTCH1-207ENST00000429896 MCTP2Q6DN12 878 aa14.64□□□□□ -0.07
PTCH1-207ENST00000429896 ZSWIM6Q9HCJ5 1215 aa14.64□□□□□ -0.07
PTCH1-207ENST00000429896 DDX19AQ9NUU7 478 aaKnown RBP14.64□□□□□ -0.07
PTCH1-207ENST00000429896 hCG_1642624A0A1W2PR95 340 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 BMP3P12645 472 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 ZNF174Q15697 407 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 NLRX1Q86UT6 975 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 PNMA3Q9UL41 463 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 DAGLAQ9Y4D2 1042 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 SMCO2A6NFE2 343 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 CBFA2T2O43439 604 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 HHIPL2Q6UWX4 724 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 TOPAZ1Q8N9V7 1692 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 PARP4Q9UKK3 1724 aaKnown RBP14.63□□□□□ -0.07
PTCH1-207ENST00000429896 CYP21A2P08686 494 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 DNA2P51530 1060 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 TDRD7Q8NHU6 1098 aaKnown RBP14.63□□□□□ -0.07
PTCH1-207ENST00000429896 NSUN4Q96CB9 384 aaKnown RBP14.63□□□□□ -0.07
PTCH1-207ENST00000429896 MXD3Q9BW11 206 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 MYOZ2Q9NPC6 264 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 GH2P01242 217 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 RILPL1Q5EBL4 403 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 SPTLC2O15270 562 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 EXOC1Q9NV70 894 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 CCDC183Q5T5S1 534 aa14.63□□□□□ -0.07
PTCH1-207ENST00000429896 DIS3L2Q8IYB7 885 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms