RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 USP17L20D6RJB6 530 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 IFIT2P09913 472 aaKnown RBP18.06■□□□□ 0.48
MSH5-208ENST00000429846 PDE6AP16499 860 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 USP17L24Q0WX57 530 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 RAB3GAP1Q15042 981 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 SLC9C2Q5TAH2 1124 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 MAP3K21Q5TCX8 1036 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 RBM27Q9P2N5 1060 aaKnown RBP18.06■□□□□ 0.48
MSH5-208ENST00000429846 RABGAP1Q9Y3P9 1069 aa18.06■□□□□ 0.48
MSH5-208ENST00000429846 RAB11FIP3O75154 756 aa18.05■□□□□ 0.48
MSH5-208ENST00000429846 CYP2B6P20813 491 aa18.05■□□□□ 0.48
MSH5-208ENST00000429846 RGS2P41220 211 aa18.05■□□□□ 0.48
MSH5-208ENST00000429846 CCNA1P78396 465 aa18.05■□□□□ 0.48
MSH5-208ENST00000429846 GPR142Q7Z601 462 aa18.05■□□□□ 0.48
MSH5-208ENST00000429846 PAWRQ96IZ0 340 aaKnown RBP18.05■□□□□ 0.48
MSH5-208ENST00000429846 PAGR1Q9BTK6 254 aa18.05■□□□□ 0.48
MSH5-208ENST00000429846 PRO3102Q9H379 93 aa18.05■□□□□ 0.48
MSH5-208ENST00000429846 MYH7P12883 1935 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 A0A1W2PPC1 479 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 POLR3DP05423 398 aaPredicted RBP18.04■□□□□ 0.48
MSH5-208ENST00000429846 ZKSCAN1P17029 563 aaPredicted RBP18.04■□□□□ 0.48
MSH5-208ENST00000429846 VCAM1P19320 739 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 SHMT1P34896 483 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 PLCD1P51178 756 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 GABPAQ06546 454 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 TRIM32Q13049 653 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 ZYXQ15942 572 aaKnown RBP18.04■□□□□ 0.48
MSH5-208ENST00000429846 LBX2Q6XYB7 198 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 PLEKHH3Q7Z736 793 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 USP6NLQ92738 828 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 APBA2Q99767 749 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 NBPF3Q9H094 633 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 PORCNQ9H237 461 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 ZBTB40Q9NUA8 1239 aa18.04■□□□□ 0.48
MSH5-208ENST00000429846 ZNF532Q9HCE3 1301 aa18.03■□□□□ 0.48
MSH5-208ENST00000429846 GOLIM4O00461 696 aa18.03■□□□□ 0.48
MSH5-208ENST00000429846 PEX10O60683 326 aa18.03■□□□□ 0.48
MSH5-208ENST00000429846 GLRX3O76003 335 aaKnown RBP18.03■□□□□ 0.48
MSH5-208ENST00000429846 PRKAR2AP13861 404 aaKnown RBP18.03■□□□□ 0.48
MSH5-208ENST00000429846 Q3C1V9 767 aa18.03■□□□□ 0.48
MSH5-208ENST00000429846 MORN1Q5T089 497 aa18.03■□□□□ 0.48
MSH5-208ENST00000429846 CATSPERGQ6ZRH7 1159 aa18.03■□□□□ 0.48
MSH5-208ENST00000429846 DIS3LQ8TF46 1054 aaKnown RBP18.03■□□□□ 0.48
MSH5-208ENST00000429846 DNAJC2Q99543 621 aaKnown RBP18.03■□□□□ 0.48
MSH5-208ENST00000429846 CWC22Q9HCG8 908 aaKnown RBP18.03■□□□□ 0.48
MSH5-208ENST00000429846 MCM9Q9NXL9 1143 aa18.03■□□□□ 0.48
MSH5-208ENST00000429846 OGDHLQ9ULD0 1010 aa18.03■□□□□ 0.48
MSH5-208ENST00000429846 COG6Q9Y2V7 657 aa18.03■□□□□ 0.48
MSH5-208ENST00000429846 TCRBV5S4A2TA0A5A2 114 aa18.02■□□□□ 0.48
MSH5-208ENST00000429846 APBB1O00213 710 aa18.02■□□□□ 0.48
MSH5-208ENST00000429846 FRMPD3Q5JV73 1810 aa18.02■□□□□ 0.47
MSH5-208ENST00000429846 POTEEQ6S8J3 1075 aa18.01■□□□□ 0.47
MSH5-208ENST00000429846 SIRT2Q8IXJ6 389 aa18.01■□□□□ 0.47
MSH5-208ENST00000429846 ACER1Q8TDN7 264 aa18.01■□□□□ 0.47
MSH5-208ENST00000429846 DCP1AQ9NPI6 582 aaPredicted RBP18.01■□□□□ 0.47
MSH5-208ENST00000429846 SWAP70Q9UH65 585 aa18.01■□□□□ 0.47
MSH5-208ENST00000429846 A0A0G2JMZ2 1700 aa18.01■□□□□ 0.47
MSH5-208ENST00000429846 ZNF236Q9UL36 1845 aa18■□□□□ 0.47
MSH5-208ENST00000429846 CNMDO75829 334 aa18■□□□□ 0.47
MSH5-208ENST00000429846 GUCY1A2P33402 732 aa18■□□□□ 0.47
MSH5-208ENST00000429846 CACNB2Q08289 660 aaPredicted RBP18■□□□□ 0.47
MSH5-208ENST00000429846 MAP2K5Q13163 448 aa18■□□□□ 0.47
MSH5-208ENST00000429846 LCORLQ8N3X6 602 aa18■□□□□ 0.47
MSH5-208ENST00000429846 SDR42E1Q8WUS8 393 aa18■□□□□ 0.47
MSH5-208ENST00000429846 DDX24Q9GZR7 859 aaKnown RBP eCLIP18■□□□□ 0.475e-14■■■■□ 20
MSH5-208ENST00000429846 C11orf49Q9H6J7 331 aa18■□□□□ 0.47
MSH5-208ENST00000429846 RPAP3Q9H6T3 665 aaPredicted RBP18■□□□□ 0.47
MSH5-208ENST00000429846 PAG1Q9NWQ8 432 aa18■□□□□ 0.47
MSH5-208ENST00000429846 BAZ2AQ9UIF9 1905 aaKnown RBP18■□□□□ 0.47
MSH5-208ENST00000429846 SLC15A5A6NIM6 579 aa17.99■□□□□ 0.47
MSH5-208ENST00000429846 SPDYE16A6NNV3 312 aaPredicted RBP17.99■□□□□ 0.47
MSH5-208ENST00000429846 ATP5JP18859 108 aa17.99■□□□□ 0.47
MSH5-208ENST00000429846 MNX1P50219 401 aaPredicted RBP17.99■□□□□ 0.47
MSH5-208ENST00000429846 SEPT2Q15019 361 aa17.99■□□□□ 0.47
MSH5-208ENST00000429846 TMEM179Q6ZVK1 233 aa17.99■□□□□ 0.47
MSH5-208ENST00000429846 ATP8A2Q9NTI2 1148 aa17.99■□□□□ 0.47
MSH5-208ENST00000429846 IVNS1ABPQ9Y6Y0 642 aa17.99■□□□□ 0.47
MSH5-208ENST00000429846 RANBP2P49792 3224 aaKnown RBP17.99■□□□□ 0.47
MSH5-208ENST00000429846 MPHOSPH10O00566 681 aaKnown RBP17.98■□□□□ 0.47
MSH5-208ENST00000429846 ADD2P35612 726 aa17.98■□□□□ 0.47
MSH5-208ENST00000429846 CCL14Q16627 93 aa17.98■□□□□ 0.47
MSH5-208ENST00000429846 EDC3Q96F86 508 aaKnown RBP17.98■□□□□ 0.47
MSH5-208ENST00000429846 RCAN3Q9UKA8 241 aa17.98■□□□□ 0.47
MSH5-208ENST00000429846 RLFQ13129 1914 aa17.98■□□□□ 0.47
MSH5-208ENST00000429846 HOXC6P09630 235 aa17.97■□□□□ 0.47
MSH5-208ENST00000429846 PTPREP23469 700 aa17.97■□□□□ 0.47
MSH5-208ENST00000429846 GRB14Q14449 540 aa17.97■□□□□ 0.47
MSH5-208ENST00000429846 COG2Q14746 738 aa17.97■□□□□ 0.47
MSH5-208ENST00000429846 WDR78Q5VTH9 848 aa17.97■□□□□ 0.47
MSH5-208ENST00000429846 AMOTL1Q8IY63 956 aa17.97■□□□□ 0.47
MSH5-208ENST00000429846 C7orf61Q8IZ16 206 aa17.97■□□□□ 0.47
MSH5-208ENST00000429846 LPAR1Q92633 364 aa17.97■□□□□ 0.47
MSH5-208ENST00000429846 HAUS7Q99871 368 aa17.97■□□□□ 0.47
MSH5-208ENST00000429846 BOLA2Q9H3K6 86 aa17.97■□□□□ 0.47
MSH5-208ENST00000429846 SH2D4AQ9H788 454 aa17.97■□□□□ 0.47
MSH5-208ENST00000429846 BTBD7Q9P203 1132 aa17.97■□□□□ 0.47
MSH5-208ENST00000429846 PARP14Q460N5 1801 aa17.96■□□□□ 0.47
MSH5-208ENST00000429846 MSCO60682 206 aa17.96■□□□□ 0.47
MSH5-208ENST00000429846 MBD4O95243 580 aa17.96■□□□□ 0.47
MSH5-208ENST00000429846 UBE3CQ15386 1083 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms