RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 RGS19P49795 217 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 COL13A1Q5TAT6 717 aaPredicted RBP11.16□□□□□ -0.62
NEDD1-203ENST00000429527 RILPL2Q969X0 211 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 GPATCH3Q96I76 525 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 SCAND2PQ9GZW5 306 aaPredicted RBP11.16□□□□□ -0.62
NEDD1-203ENST00000429527 PDRG1Q9NUG6 133 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 SMC3Q9UQE7 1217 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 MRVI1Q9Y6F6 885 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 TCP10L2B9ZVM9 353 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 CAPN2P17655 700 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 GJB2P29033 226 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 FAM193AP78312 1265 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 PTH1RQ03431 593 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 NFIAQ12857 509 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 ME3Q16798 604 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 SH3D19Q5HYK7 790 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 CLASRPQ8N2M8 674 aaKnown RBP11.16□□□□□ -0.62
NEDD1-203ENST00000429527 PKNOX2Q96KN3 472 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 RIOK1Q9BRS2 568 aaKnown RBP11.16□□□□□ -0.62
NEDD1-203ENST00000429527 UPF3BQ9BZI7 483 aaKnown RBP11.16□□□□□ -0.62
NEDD1-203ENST00000429527 CLSTN2Q9H4D0 955 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 DDX4Q9NQI0 724 aaKnown RBP11.16□□□□□ -0.62
NEDD1-203ENST00000429527 TRIM6-TRIM34B2RNG4 842 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 BAG3O95817 575 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 CCDC192P0DO97 292 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 RPS6KB1P23443 525 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 LBX1P52954 281 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 EVCP57679 992 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 CREB3L3Q68CJ9 461 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 SCYL3Q8IZE3 742 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 NEUROD6Q96NK8 337 aa11.16□□□□□ -0.62
NEDD1-203ENST00000429527 SLC27A2O14975 620 aa11.15□□□□□ -0.62
NEDD1-203ENST00000429527 ZAP70P43403 619 aa11.15□□□□□ -0.62
NEDD1-203ENST00000429527 DMTNQ08495 405 aa11.15□□□□□ -0.62
NEDD1-203ENST00000429527 TOB2Q14106 344 aaPredicted RBP11.15□□□□□ -0.62
NEDD1-203ENST00000429527 BEGAINQ9BUH8 593 aa11.15□□□□□ -0.62
NEDD1-203ENST00000429527 ROBO3Q96MS0 1386 aa11.15□□□□□ -0.62
NEDD1-203ENST00000429527 PLXNB2O15031 1838 aa11.15□□□□□ -0.62
NEDD1-203ENST00000429527 A0A0G2JLL6 359 aaPredicted RBP11.15□□□□□ -0.62
NEDD1-203ENST00000429527 PRRT2Q7Z6L0 340 aaPredicted RBP11.15□□□□□ -0.62
NEDD1-203ENST00000429527 CDAN1Q8IWY9 1227 aa11.15□□□□□ -0.62
NEDD1-203ENST00000429527 CLMNQ96JQ2 1002 aa11.15□□□□□ -0.62
NEDD1-203ENST00000429527 GNRH1P01148 92 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 CETPP11597 493 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 KRT32Q14532 448 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 UBE3CQ15386 1083 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 NAA16Q6N069 864 aaPredicted RBP11.14□□□□□ -0.63
NEDD1-203ENST00000429527 AACSQ86V21 672 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 OPTNQ96CV9 577 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 WDR18Q9BV38 432 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 DIAPH3Q9NSV4 1193 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 TPCN1Q9ULQ1 816 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 RESTQ13127 1097 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 ADCK5Q3MIX3 580 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 GORABQ5T7V8 394 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 PRAMEF18Q5VWM3 479 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 TATDN1Q6P1N9 297 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 TTC6Q86TZ1 520 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 FOXP4Q8IVH2 680 aaPredicted RBP11.14□□□□□ -0.63
NEDD1-203ENST00000429527 GTPBP4Q9BZE4 634 aaKnown RBP11.14□□□□□ -0.63
NEDD1-203ENST00000429527 AFG3L2Q9Y4W6 797 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 CSADQ9Y600 493 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 RLFQ13129 1914 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 GOLGA6L6A8MZA4 724 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 CASTP20810 708 aaKnown RBP11.14□□□□□ -0.63
NEDD1-203ENST00000429527 OTUD7BQ6GQQ9 843 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 ADGRA1Q86SQ6 560 aa11.14□□□□□ -0.63
NEDD1-203ENST00000429527 FLT1P17948 1338 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 NEMFO60524 1076 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 KRT85P78386 507 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 OS9Q13438 667 aaPredicted RBP11.13□□□□□ -0.63
NEDD1-203ENST00000429527 PTPN18Q99952 460 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 BPIFA3Q9BQP9 254 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 IGF2BP3O00425 579 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEDD1-203ENST00000429527 ADD1P35611 737 aaKnown RBP11.13□□□□□ -0.63
NEDD1-203ENST00000429527 MAP3K12Q12852 859 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 SNAPC2Q13487 334 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 PI16Q6UXB8 463 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 ZFPM1Q8IX07 1006 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 BRI3BPQ8WY22 251 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 MRFAP1L1Q96HT8 127 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 FEZ1Q99689 392 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 ZSCAN16Q9H4T2 348 aaPredicted RBP11.13□□□□□ -0.63
NEDD1-203ENST00000429527 RBM8AQ9Y5S9 174 aaKnown RBP11.13□□□□□ -0.63
NEDD1-203ENST00000429527 DDTLA6NHG4 134 aaPredicted RBP11.13□□□□□ -0.63
NEDD1-203ENST00000429527 ZSCAN20P17040 1043 aaPredicted RBP11.13□□□□□ -0.63
NEDD1-203ENST00000429527 PRMT2P55345 433 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 GIMAP6Q6P9H5 292 aa11.13□□□□□ -0.63
NEDD1-203ENST00000429527 CTU1Q7Z7A3 348 aaKnown RBP11.13□□□□□ -0.63
NEDD1-203ENST00000429527 ADD2P35612 726 aa11.12□□□□□ -0.63
NEDD1-203ENST00000429527 GABPAQ06546 454 aa11.12□□□□□ -0.63
NEDD1-203ENST00000429527 GPAT2Q6NUI2 795 aa11.12□□□□□ -0.63
NEDD1-203ENST00000429527 SH3RF3Q8TEJ3 882 aaPredicted RBP11.12□□□□□ -0.63
NEDD1-203ENST00000429527 GTF3C6Q969F1 213 aa11.12□□□□□ -0.63
NEDD1-203ENST00000429527 PI4KBQ9UBF8 816 aa11.12□□□□□ -0.63
NEDD1-203ENST00000429527 GPR25O00155 361 aa11.12□□□□□ -0.63
NEDD1-203ENST00000429527 CTAGE5O15320 804 aa11.12□□□□□ -0.63
NEDD1-203ENST00000429527 DNM1Q05193 864 aaKnown RBP11.12□□□□□ -0.63
NEDD1-203ENST00000429527 PROCA1Q8NCQ7 364 aaPredicted RBP11.12□□□□□ -0.63
NEDD1-203ENST00000429527 C12orf42Q96LP6 360 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms