RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 BCAP29Q9UHQ4 241 aa14.18□□□□□ -0.14
LDB3-205ENST00000429277 NFE2L3Q9Y4A8 694 aa14.18□□□□□ -0.14
LDB3-205ENST00000429277 HSPA1LP34931 641 aa14.18□□□□□ -0.14
LDB3-205ENST00000429277 RPS6KA1Q15418 735 aa14.18□□□□□ -0.14
LDB3-205ENST00000429277 P3H4Q92791 437 aa14.18□□□□□ -0.14
LDB3-205ENST00000429277 BICRAQ9NZM4 1560 aa14.18□□□□□ -0.14
LDB3-205ENST00000429277 PTPRKQ15262 1439 aa14.18□□□□□ -0.14
LDB3-205ENST00000429277 ZNF274Q96GC6 653 aaPredicted RBP14.17□□□□□ -0.14
LDB3-205ENST00000429277 TRPC6Q9Y210 931 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 PCDHB13Q9Y5F0 798 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 PPFIA1Q13136 1202 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 NIM1KQ8IY84 436 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 CARD10Q9BWT7 1032 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 MRPL44Q9H9J2 332 aaKnown RBP14.17□□□□□ -0.14
LDB3-205ENST00000429277 JAG2Q9Y219 1238 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 GOLGA6CA6NDK9 693 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 GOLGA6BA6NDN3 693 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 GOLGA6DP0CG33 693 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 SEPT6Q14141 434 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.17□□□□□ -0.14
LDB3-205ENST00000429277 SUCLG2Q96I99 432 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 PFDN4Q9NQP4 134 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 GOLGA6AQ9NYA3 693 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 ZNF532Q9HCE3 1301 aa14.17□□□□□ -0.14
LDB3-205ENST00000429277 I3L4J1 428 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 GCNT3O95395 438 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 DLGAP5Q15398 846 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 CCDC62Q6P9F0 684 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 ATP2A3Q93084 1043 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 VCXQ9H320 206 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 NELFBQ8WX92 580 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 TNNQ9UQP3 1299 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 NDUFAB1O14561 156 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 TRIM37O94972 964 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 DNAJC21Q5F1R6 531 aaKnown RBP14.16□□□□□ -0.14
LDB3-205ENST00000429277 HHATQ5VTY9 493 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 RPUSD2Q8IZ73 545 aaKnown RBP14.16□□□□□ -0.14
LDB3-205ENST00000429277 TACC3Q9Y6A5 838 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 LPXNO60711 386 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 PRPF6O94906 941 aaKnown RBP14.16□□□□□ -0.14
LDB3-205ENST00000429277 ARHGAP25P42331 645 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 IRX3P78415 501 aaPredicted RBP14.16□□□□□ -0.14
LDB3-205ENST00000429277 TRIML1Q8N9V2 468 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 PRPF31Q8WWY3 499 aaKnown RBP14.16□□□□□ -0.14
LDB3-205ENST00000429277 RAB3IPQ96QF0 476 aaPredicted RBP14.16□□□□□ -0.14
LDB3-205ENST00000429277 SPC25Q9HBM1 224 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 WWC3Q9ULE0 1092 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 ZMYM4Q5VZL5 1548 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 CEP104O60308 925 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 SARNPP82979 210 aaKnown RBP14.16□□□□□ -0.14
LDB3-205ENST00000429277 PEX26Q7Z412 305 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 SDCCAG8Q86SQ7 713 aaPredicted RBP14.16□□□□□ -0.14
LDB3-205ENST00000429277 LMNTD2Q8IXW0 634 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 ZHX1Q9UKY1 873 aaPredicted RBP14.16□□□□□ -0.14
LDB3-205ENST00000429277 USP19O94966 1318 aa14.16□□□□□ -0.14
LDB3-205ENST00000429277 GBP1P32455 592 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 SLFN12Q8IYM2 578 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 CBX8Q9HC52 389 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 NCKAP5LQ9HCH0 1330 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 KIAA0556O60303 1618 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 TCIRG1Q13488 830 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 NSMFQ6X4W1 530 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 FAM227BQ96M60 508 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 CD19P15391 556 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 TFAP4Q01664 338 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 PABPC4Q13310 644 aaKnown RBP eCLIP14.15□□□□□ -0.14
LDB3-205ENST00000429277 RIOK1Q9BRS2 568 aaKnown RBP14.15□□□□□ -0.14
LDB3-205ENST00000429277 PLXNC1O60486 1568 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 PPFIA4O75335 1185 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 PPARAQ07869 468 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 NACA2Q9H009 215 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 MAST1Q9Y2H9 1570 aa14.15□□□□□ -0.14
LDB3-205ENST00000429277 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
LDB3-205ENST00000429277 CEP85LQ5SZL2 805 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 ADALQ6DHV7 355 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 GSDMBQ8TAX9 411 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 NCOA5Q9HCD5 579 aaKnown RBP14.14□□□□□ -0.15
LDB3-205ENST00000429277 PER1O15534 1290 aaPredicted RBP14.14□□□□□ -0.15
LDB3-205ENST00000429277 PRDM1O75626 825 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 CPA1P15085 419 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 RPS8P62241 208 aaKnown RBP14.14□□□□□ -0.15
LDB3-205ENST00000429277 DCAF15Q66K64 600 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 GRK7Q8WTQ7 553 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 GAS7O60861 476 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 CFBP00751 764 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 ZBTB8OSQ8IWT0 167 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 TRIM58Q8NG06 486 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 MAGEF1Q9HAY2 307 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 RTEL1Q9NZ71 1219 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 MRPL11Q9Y3B7 192 aaKnown RBP14.14□□□□□ -0.15
LDB3-205ENST00000429277 A0A1B0GUA9 196 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 E7EWF7 191 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 ATP2B4P23634 1241 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 STAT1P42224 750 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 CCDC105Q8IYK2 499 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 DEPTORQ8TB45 409 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 HAUS1Q96CS2 278 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 TAB2Q9NYJ8 693 aa14.14□□□□□ -0.15
LDB3-205ENST00000429277 CTTNBP2Q8WZ74 1663 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 HPDP32754 393 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms