RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 GIMAP6Q6P9H5 292 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 USP50Q70EL3 339 aaPredicted RBP13.17□□□□□ -0.3
CECR3-201ENST00000428828 ATAD5Q96QE3 1844 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 WDR33Q9C0J8 1336 aaKnown RBP13.17□□□□□ -0.3
CECR3-201ENST00000428828 DDTLA6NHG4 134 aaPredicted RBP13.17□□□□□ -0.3
CECR3-201ENST00000428828 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 TNNI2P48788 182 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 PLCD1P51178 756 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 RASEFQ8IZ41 740 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 ENTPD3O75355 529 aa13.16□□□□□ -0.3
CECR3-201ENST00000428828 SLURP2P0DP57 97 aa13.16□□□□□ -0.3
CECR3-201ENST00000428828 VEGFAP15692 232 aaPredicted RBP13.16□□□□□ -0.3
CECR3-201ENST00000428828 UBE2HP62256 183 aa13.16□□□□□ -0.3
CECR3-201ENST00000428828 TNFAIP1Q13829 316 aa13.16□□□□□ -0.3
CECR3-201ENST00000428828 RASA3Q14644 834 aa13.16□□□□□ -0.3
CECR3-201ENST00000428828 TEX35Q5T0J7 233 aa13.16□□□□□ -0.3
CECR3-201ENST00000428828 SH3BP5LQ7L8J4 393 aa13.16□□□□□ -0.3
CECR3-201ENST00000428828 TBC1D10CQ8IV04 446 aa13.16□□□□□ -0.3
CECR3-201ENST00000428828 DCPSQ96C86 337 aaKnown RBP13.16□□□□□ -0.3
CECR3-201ENST00000428828 DYNLL2Q96FJ2 89 aa13.16□□□□□ -0.3
CECR3-201ENST00000428828 NBPF3Q9H094 633 aa13.16□□□□□ -0.3
CECR3-201ENST00000428828 INCENPQ9NQS7 918 aa13.16□□□□□ -0.3
CECR3-201ENST00000428828 TOMM22Q9NS69 142 aa13.16□□□□□ -0.3
CECR3-201ENST00000428828 FAM196BA6NMK8 535 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 HLA-DOAP06340 250 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 ZKSCAN1P17029 563 aaPredicted RBP13.15□□□□□ -0.3
CECR3-201ENST00000428828 C12orf60Q5U649 245 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 PRAMEF18Q5VWM3 479 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 PNMA8AQ86V59 439 aaPredicted RBP13.15□□□□□ -0.3
CECR3-201ENST00000428828 APOBEC3FQ8IUX4 373 aaKnown RBP13.15□□□□□ -0.3
CECR3-201ENST00000428828 FAM151AQ8WW52 585 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 TMX3Q96JJ7 454 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 CSRNP1Q96S65 589 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 NCAPGQ9BPX3 1015 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 KCND1Q9NSA2 647 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 SNX14Q9Y5W7 946 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 ADM5C9JUS6 153 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
CECR3-201ENST00000428828 DHX16O60231 1041 aaKnown RBP13.15□□□□□ -0.3
CECR3-201ENST00000428828 RRP12Q5JTH9 1297 aaKnown RBP13.15□□□□□ -0.3
CECR3-201ENST00000428828 ICE2Q659A1 982 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 DLK2Q6UY11 383 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 USP48Q86UV5 1035 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 MYCBPQ99417 103 aaPredicted RBP13.15□□□□□ -0.3
CECR3-201ENST00000428828 DEFB129Q9H1M3 183 aa13.15□□□□□ -0.3
CECR3-201ENST00000428828 V9GYY5 206 aaPredicted RBP13.15□□□□□ -0.3
CECR3-201ENST00000428828 NEDD4P46934 1319 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 ERICH4A6NGS2 130 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 ATP8B1O43520 1251 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 PRDM1O75626 825 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 CASQ1P31415 396 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 SBK1Q52WX2 424 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 FKBP1CQ5VVH2 108 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 STOX1Q6ZVD7 989 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 TTC6Q86TZ1 520 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 FAM83AQ86UY5 434 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 CRACR2BQ8N4Y2 399 aaPredicted RBP13.14□□□□□ -0.31
CECR3-201ENST00000428828 SLC44A5Q8NCS7 719 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 TACC3Q9Y6A5 838 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 COL2A1P02458 1487 aaPredicted RBP13.14□□□□□ -0.31
CECR3-201ENST00000428828 ATRNL1Q5VV63 1379 aa13.14□□□□□ -0.31
CECR3-201ENST00000428828 E7EWF7 191 aa13.13□□□□□ -0.31
CECR3-201ENST00000428828 KIF2AO00139 706 aaPredicted RBP13.13□□□□□ -0.31
CECR3-201ENST00000428828 NEMFO60524 1076 aa13.13□□□□□ -0.31
CECR3-201ENST00000428828 NPM3O75607 178 aaKnown RBP13.13□□□□□ -0.31
CECR3-201ENST00000428828 H2AFXP16104 143 aaPredicted RBP13.13□□□□□ -0.31
CECR3-201ENST00000428828 ANAPC15P60006 121 aa13.13□□□□□ -0.31
CECR3-201ENST00000428828 KRT26Q7Z3Y9 468 aa13.13□□□□□ -0.31
CECR3-201ENST00000428828 SULF1Q8IWU6 871 aa13.13□□□□□ -0.31
CECR3-201ENST00000428828 JAKMIP1Q96N16 626 aaKnown RBP13.13□□□□□ -0.31
CECR3-201ENST00000428828 DHX36Q9H2U1 1008 aaKnown RBP13.13□□□□□ -0.31
CECR3-201ENST00000428828 GPBP1L1Q9HC44 474 aaPredicted RBP13.13□□□□□ -0.31
CECR3-201ENST00000428828 CWC15Q9P013 229 aaKnown RBP13.13□□□□□ -0.31
CECR3-201ENST00000428828 RSPH14Q9UHP6 348 aa13.13□□□□□ -0.31
CECR3-201ENST00000428828 OTOFQ9HC10 1997 aa13.13□□□□□ -0.31
CECR3-201ENST00000428828 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
CECR3-201ENST00000428828 SLC3A2P08195 630 aaKnown RBP13.13□□□□□ -0.31
CECR3-201ENST00000428828 CPA1P15085 419 aa13.13□□□□□ -0.31
CECR3-201ENST00000428828 GTF2A1P52655 376 aaPredicted RBP13.13□□□□□ -0.31
CECR3-201ENST00000428828 TPM4P67936 248 aa13.13□□□□□ -0.31
CECR3-201ENST00000428828 AKNAD1Q5T1N1 836 aa13.13□□□□□ -0.31
CECR3-201ENST00000428828 MAP1SQ66K74 1059 aaPredicted RBP13.13□□□□□ -0.31
CECR3-201ENST00000428828 MFSD6Q6ZSS7 791 aa13.13□□□□□ -0.31
CECR3-201ENST00000428828 MYH4Q9Y623 1939 aa13.13□□□□□ -0.31
CECR3-201ENST00000428828 ROBO3Q96MS0 1386 aa13.12□□□□□ -0.31
CECR3-201ENST00000428828 GADD45BO75293 160 aaPredicted RBP13.12□□□□□ -0.31
CECR3-201ENST00000428828 CASTP20810 708 aaKnown RBP13.12□□□□□ -0.31
CECR3-201ENST00000428828 GUCY2CP25092 1073 aa13.12□□□□□ -0.31
CECR3-201ENST00000428828 COL9A3Q14050 684 aaPredicted RBP13.12□□□□□ -0.31
CECR3-201ENST00000428828 NBPF12Q5TAG4 269 aaPredicted RBP13.12□□□□□ -0.31
CECR3-201ENST00000428828 CEP135Q66GS9 1140 aa13.12□□□□□ -0.31
CECR3-201ENST00000428828 FBXO38Q6PIJ6 1188 aa13.12□□□□□ -0.31
CECR3-201ENST00000428828 MIGA2Q7L4E1 593 aa13.12□□□□□ -0.31
CECR3-201ENST00000428828 STAG1Q8WVM7 1258 aa13.12□□□□□ -0.31
CECR3-201ENST00000428828 GLIS2Q9BZE0 524 aaPredicted RBP13.12□□□□□ -0.31
CECR3-201ENST00000428828 PI4KBQ9UBF8 816 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms