RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 TROAPQ12815 778 aa14.84□□□□□ -0.03
HMGB3P4-201ENST00000428776 RASA3Q14644 834 aa14.84□□□□□ -0.03
HMGB3P4-201ENST00000428776 RTN1Q16799 776 aa14.84□□□□□ -0.03
HMGB3P4-201ENST00000428776 RAB11FIP4Q86YS3 637 aa14.84□□□□□ -0.03
HMGB3P4-201ENST00000428776 MAP3K14Q99558 947 aa14.84□□□□□ -0.03
HMGB3P4-201ENST00000428776 MYL10Q9BUA6 226 aa14.84□□□□□ -0.03
HMGB3P4-201ENST00000428776 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.84□□□□□ -0.03
HMGB3P4-201ENST00000428776 TMEM39BQ9GZU3 492 aa14.84□□□□□ -0.03
HMGB3P4-201ENST00000428776 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.84□□□□□ -0.03
HMGB3P4-201ENST00000428776 ADARB2Q9NS39 739 aaKnown RBP14.84□□□□□ -0.03
HMGB3P4-201ENST00000428776 TCHHQ07283 1943 aa14.84□□□□□ -0.03
HMGB3P4-201ENST00000428776 JAK2O60674 1132 aa14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 TOP1P11387 765 aaKnown RBP14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 RXRAP19793 462 aa14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 SYT1P21579 422 aa14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 CDC27P30260 824 aa14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 ADD1P35611 737 aaKnown RBP14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 MAP3K10Q02779 954 aa14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 LARP1BQ659C4 914 aaKnown RBP14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 APOBEC3FQ8IUX4 373 aaKnown RBP14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 PNMA1Q8ND90 353 aa14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 NUP133Q8WUM0 1156 aa14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 CEP95Q96GE4 821 aa14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 L3MBTL3Q96JM7 780 aaPredicted RBP14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 FAM217BQ9NTX9 383 aaPredicted RBP14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 RBM28Q9NW13 759 aaKnown RBP14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 MTMR4Q9NYA4 1195 aa14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 STX8Q9UNK0 236 aa14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 WDR33Q9C0J8 1336 aaKnown RBP14.83□□□□□ -0.04
HMGB3P4-201ENST00000428776 FAM196BA6NMK8 535 aa14.82□□□□□ -0.04
HMGB3P4-201ENST00000428776 MPHOSPH10O00566 681 aaKnown RBP14.82□□□□□ -0.04
HMGB3P4-201ENST00000428776 STX6O43752 255 aa14.82□□□□□ -0.04
HMGB3P4-201ENST00000428776 BRD1O95696 1058 aa14.82□□□□□ -0.04
HMGB3P4-201ENST00000428776 NTRK3Q16288 839 aa14.82□□□□□ -0.04
HMGB3P4-201ENST00000428776 CCDC144CPQ8IYA2 1237 aa14.82□□□□□ -0.04
HMGB3P4-201ENST00000428776 FAM184AQ8NB25 1140 aa14.82□□□□□ -0.04
HMGB3P4-201ENST00000428776 CTCFLQ8NI51 663 aaPredicted RBP14.82□□□□□ -0.04
HMGB3P4-201ENST00000428776 TRPM4Q8TD43 1214 aa14.82□□□□□ -0.04
HMGB3P4-201ENST00000428776 DDX11Q96FC9 970 aa14.82□□□□□ -0.04
HMGB3P4-201ENST00000428776 TEPSINQ96N21 525 aa14.82□□□□□ -0.04
HMGB3P4-201ENST00000428776 TMEM47Q9BQJ4 181 aa14.82□□□□□ -0.04
HMGB3P4-201ENST00000428776 WDR90Q96KV7 1748 aa14.82□□□□□ -0.04
HMGB3P4-201ENST00000428776 GLTPD2A6NH11 291 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 TTLL1O95922 423 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 SLURP2P0DP57 97 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 IFNAR1P17181 557 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 KIF5BP33176 963 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 HIRAP54198 1017 aaPredicted RBP14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 PKP1Q13835 747 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 ABCB5Q2M3G0 1257 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 ANGEL2Q5VTE6 544 aaKnown RBP14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 TMEM179Q6ZVK1 233 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 HOOK2Q96ED9 719 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 DEFB129Q9H1M3 183 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 KANSL2Q9H9L4 492 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 CABP5Q9NP86 173 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 ZDHHC9Q9Y397 364 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 PPP2R3BQ9Y5P8 575 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 ASTN2O75129 1339 aaPredicted RBP14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 PITPNM2Q9BZ72 1349 aa14.81□□□□□ -0.04
HMGB3P4-201ENST00000428776 DOCK1Q14185 1865 aa14.8□□□□□ -0.04
HMGB3P4-201ENST00000428776 FDPSP14324 419 aaKnown RBP14.8□□□□□ -0.04
HMGB3P4-201ENST00000428776 SSRP1Q08945 709 aaKnown RBP14.8□□□□□ -0.04
HMGB3P4-201ENST00000428776 RGS22Q8NE09 1264 aa14.8□□□□□ -0.04
HMGB3P4-201ENST00000428776 TNPO1Q92973 898 aaKnown RBP14.8□□□□□ -0.04
HMGB3P4-201ENST00000428776 NYAP2Q9P242 653 aa14.8□□□□□ -0.04
HMGB3P4-201ENST00000428776 ORC3Q9UBD5 711 aaPredicted RBP14.8□□□□□ -0.04
HMGB3P4-201ENST00000428776 STK36Q9NRP7 1315 aa14.8□□□□□ -0.04
HMGB3P4-201ENST00000428776 BAZ2BQ9UIF8 2168 aaKnown RBP14.8□□□□□ -0.04
HMGB3P4-201ENST00000428776 DTNBO60941 627 aa14.79□□□□□ -0.04
HMGB3P4-201ENST00000428776 FMNL1O95466 1100 aaPredicted RBP14.79□□□□□ -0.04
HMGB3P4-201ENST00000428776 ZSCAN22P10073 491 aaPredicted RBP14.79□□□□□ -0.04
HMGB3P4-201ENST00000428776 GNAQP50148 359 aa14.79□□□□□ -0.04
HMGB3P4-201ENST00000428776 GRM4Q14833 912 aa14.79□□□□□ -0.04
HMGB3P4-201ENST00000428776 USP50Q70EL3 339 aaPredicted RBP14.79□□□□□ -0.04
HMGB3P4-201ENST00000428776 TRIM22Q8IYM9 498 aa14.79□□□□□ -0.04
HMGB3P4-201ENST00000428776 MKL1Q969V6 931 aa14.79□□□□□ -0.04
HMGB3P4-201ENST00000428776 GGA3Q9NZ52 723 aa14.79□□□□□ -0.04
HMGB3P4-201ENST00000428776 CLIP2Q9UDT6 1046 aa14.79□□□□□ -0.04
HMGB3P4-201ENST00000428776 GDF11O95390 407 aa14.78□□□□□ -0.04
HMGB3P4-201ENST00000428776 CLEC17AQ6ZS10 378 aa14.78□□□□□ -0.04
HMGB3P4-201ENST00000428776 TMTC3Q6ZXV5 915 aa14.78□□□□□ -0.04
HMGB3P4-201ENST00000428776 MIGA2Q7L4E1 593 aa14.78□□□□□ -0.04
HMGB3P4-201ENST00000428776 NBPF11Q86T75 865 aa14.78□□□□□ -0.04
HMGB3P4-201ENST00000428776 CDAN1Q8IWY9 1227 aa14.78□□□□□ -0.04
HMGB3P4-201ENST00000428776 WASF1Q92558 559 aa14.78□□□□□ -0.04
HMGB3P4-201ENST00000428776 SYNPO2Q9UMS6 1093 aa14.78□□□□□ -0.04
HMGB3P4-201ENST00000428776 MTMR6Q9Y217 621 aa14.78□□□□□ -0.04
HMGB3P4-201ENST00000428776 VPS37CA5D8V6 355 aaPredicted RBP14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 IQCA1LA6NCM1 817 aa14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 H3BQV1 296 aa14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 GH2P01242 217 aa14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 EEF2P13639 858 aaKnown RBP14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 GUCY1A2P33402 732 aa14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 RRP1BQ14684 758 aaKnown RBP14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 SEPT2Q15019 361 aa14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 IFFO2Q5TF58 517 aa14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 DCAF15Q66K64 600 aa14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 ZC3H15Q8WU90 426 aaKnown RBP14.77□□□□□ -0.05
HMGB3P4-201ENST00000428776 PHKBQ93100 1093 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms