RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ERVK-24P63145 666 aa18.83■□□□□ 0.6
SEC13-210ENST00000428626 RAB3GAP1Q15042 981 aa18.83■□□□□ 0.6
SEC13-210ENST00000428626 ABCB5Q2M3G0 1257 aa18.83■□□□□ 0.6
SEC13-210ENST00000428626 DIS3LQ8TF46 1054 aaKnown RBP18.83■□□□□ 0.6
SEC13-210ENST00000428626 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.83■□□□□ 0.6
SEC13-210ENST00000428626 BOLA2Q9H3K6 86 aa18.83■□□□□ 0.6
SEC13-210ENST00000428626 PRKAB2O43741 272 aa18.82■□□□□ 0.6
SEC13-210ENST00000428626 TFRCP02786 760 aaKnown RBP18.82■□□□□ 0.6
SEC13-210ENST00000428626 POLR3DP05423 398 aaPredicted RBP18.82■□□□□ 0.6
SEC13-210ENST00000428626 CYP2B6P20813 491 aa18.82■□□□□ 0.6
SEC13-210ENST00000428626 SLC44A5Q8NCS7 719 aa18.82■□□□□ 0.6
SEC13-210ENST00000428626 USP6NLQ92738 828 aa18.82■□□□□ 0.6
SEC13-210ENST00000428626 PAGR1Q9BTK6 254 aa18.82■□□□□ 0.6
SEC13-210ENST00000428626 CRNKL1Q9BZJ0 848 aaKnown RBP18.82■□□□□ 0.6
SEC13-210ENST00000428626 KIAA1683Q9H0B3 1180 aa18.82■□□□□ 0.6
SEC13-210ENST00000428626 ARMT1Q9H993 441 aa18.82■□□□□ 0.6
SEC13-210ENST00000428626 DCP1AQ9NPI6 582 aaPredicted RBP18.82■□□□□ 0.6
SEC13-210ENST00000428626 MCM9Q9NXL9 1143 aa18.82■□□□□ 0.6
SEC13-210ENST00000428626 SZT2Q5T011 3432 aa18.81■□□□□ 0.6
SEC13-210ENST00000428626 BAZ2AQ9UIF9 1905 aaKnown RBP18.81■□□□□ 0.6
SEC13-210ENST00000428626 A0A1W2PRG0 241 aa18.81■□□□□ 0.6
SEC13-210ENST00000428626 SMARCA5O60264 1052 aaPredicted RBP18.81■□□□□ 0.6
SEC13-210ENST00000428626 ATP5JP18859 108 aa18.81■□□□□ 0.6
SEC13-210ENST00000428626 VCAM1P19320 739 aa18.81■□□□□ 0.6
SEC13-210ENST00000428626 MNX1P50219 401 aaPredicted RBP18.81■□□□□ 0.6
SEC13-210ENST00000428626 SEPT2Q15019 361 aa18.81■□□□□ 0.6
SEC13-210ENST00000428626 CHRDL2Q6WN34 429 aa18.81■□□□□ 0.6
SEC13-210ENST00000428626 FEZ1Q99689 392 aa18.81■□□□□ 0.6
SEC13-210ENST00000428626 PAG1Q9NWQ8 432 aa18.81■□□□□ 0.6
SEC13-210ENST00000428626 PCDH10Q9P2E7 1040 aa18.81■□□□□ 0.6
SEC13-210ENST00000428626 ADD2P35612 726 aa18.8■□□□□ 0.6
SEC13-210ENST00000428626 MAP3K21Q5TCX8 1036 aa18.8■□□□□ 0.6
SEC13-210ENST00000428626 CATSPERGQ6ZRH7 1159 aa18.8■□□□□ 0.6
SEC13-210ENST00000428626 GPR142Q7Z601 462 aa18.8■□□□□ 0.6
SEC13-210ENST00000428626 DYNLL2Q96FJ2 89 aa18.8■□□□□ 0.6
SEC13-210ENST00000428626 PAWRQ96IZ0 340 aaKnown RBP18.8■□□□□ 0.6
SEC13-210ENST00000428626 HTATIP2Q9BUP3 242 aa18.8■□□□□ 0.6
SEC13-210ENST00000428626 RPTORQ8N122 1335 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 USP17L15C9J2P7 530 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 USP17L13C9JLJ4 530 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 USP17L11C9JVI0 530 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 USP17L18D6R9N7 530 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 USP17L22D6RA61 530 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 USP17L17D6RBQ6 530 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 USP17L19D6RCP7 530 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 USP17L20D6RJB6 530 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 USP17L24Q0WX57 530 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 CCL14Q16627 93 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 KIAA1755Q5JYT7 1200 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 MORN1Q5T089 497 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 HAUS7Q99871 368 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 NUDT12Q9BQG2 462 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 PRO3102Q9H379 93 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 BTBD7Q9P203 1132 aa18.79■□□□□ 0.6
SEC13-210ENST00000428626 MYH7P12883 1935 aa18.78■□□□□ 0.6
SEC13-210ENST00000428626 CYP2D7A0A087X1C5 515 aa18.78■□□□□ 0.6
SEC13-210ENST00000428626 MBD4O95243 580 aa18.78■□□□□ 0.6
SEC13-210ENST00000428626 MAPK4P31152 587 aa18.78■□□□□ 0.6
SEC13-210ENST00000428626 PDE3AQ14432 1141 aa18.78■□□□□ 0.6
SEC13-210ENST00000428626 CLEC10AQ8IUN9 316 aa18.78■□□□□ 0.6
SEC13-210ENST00000428626 SIAH1Q8IUQ4 282 aa18.78■□□□□ 0.6
SEC13-210ENST00000428626 CABP5Q9NP86 173 aa18.78■□□□□ 0.6
SEC13-210ENST00000428626 RBM27Q9P2N5 1060 aaKnown RBP18.78■□□□□ 0.6
SEC13-210ENST00000428626 RABGAP1Q9Y3P9 1069 aa18.78■□□□□ 0.6
SEC13-210ENST00000428626 RLFQ13129 1914 aa18.78■□□□□ 0.6
SEC13-210ENST00000428626 SPDYE16A6NNV3 312 aaPredicted RBP18.77■□□□□ 0.6
SEC13-210ENST00000428626 XRCC5P13010 732 aaKnown RBP18.77■□□□□ 0.6
SEC13-210ENST00000428626 PRKAR2AP13861 404 aaKnown RBP18.77■□□□□ 0.6
SEC13-210ENST00000428626 USP14P54578 494 aa18.77■□□□□ 0.6
SEC13-210ENST00000428626 PLEKHH3Q7Z736 793 aa18.77■□□□□ 0.6
SEC13-210ENST00000428626 SOCS4Q8WXH5 440 aa18.77■□□□□ 0.6
SEC13-210ENST00000428626 RPAP3Q9H6T3 665 aaPredicted RBP18.77■□□□□ 0.6
SEC13-210ENST00000428626 HMX1Q9NP08 348 aaPredicted RBP18.77■□□□□ 0.6
SEC13-210ENST00000428626 CACNB2Q08289 660 aaPredicted RBP18.76■□□□□ 0.59
SEC13-210ENST00000428626 LBX2Q6XYB7 198 aa18.76■□□□□ 0.59
SEC13-210ENST00000428626 GTF3C2Q8WUA4 911 aaPredicted RBP18.76■□□□□ 0.59
SEC13-210ENST00000428626 MYH8P13535 1937 aa18.75■□□□□ 0.59
SEC13-210ENST00000428626 MPHOSPH10O00566 681 aaKnown RBP18.75■□□□□ 0.59
SEC13-210ENST00000428626 AKR1B1P15121 316 aa18.75■□□□□ 0.59
SEC13-210ENST00000428626 LRRCC1Q9C099 1032 aa18.75■□□□□ 0.59
SEC13-210ENST00000428626 PUS7LQ9H0K6 701 aaKnown RBP18.75■□□□□ 0.59
SEC13-210ENST00000428626 FLRT1Q9NZU1 646 aa18.75■□□□□ 0.59
SEC13-210ENST00000428626 CCND3P30281 292 aaPredicted RBP18.74■□□□□ 0.59
SEC13-210ENST00000428626 UBE3CQ15386 1083 aa18.74■□□□□ 0.59
SEC13-210ENST00000428626 C12orf60Q5U649 245 aa18.74■□□□□ 0.59
SEC13-210ENST00000428626 CHMP4BQ9H444 224 aaKnown RBP18.74■□□□□ 0.59
SEC13-210ENST00000428626 ATP8A2Q9NTI2 1148 aa18.74■□□□□ 0.59
SEC13-210ENST00000428626 OGDHLQ9ULD0 1010 aa18.74■□□□□ 0.59
SEC13-210ENST00000428626 USP17L12C9JPN9 530 aa18.73■□□□□ 0.59
SEC13-210ENST00000428626 USP17L21D6R901 530 aa18.73■□□□□ 0.59
SEC13-210ENST00000428626 EVI5O60447 810 aa18.73■□□□□ 0.59
SEC13-210ENST00000428626 ZKSCAN1P17029 563 aaPredicted RBP18.73■□□□□ 0.59
SEC13-210ENST00000428626 CAPN2P17655 700 aa18.73■□□□□ 0.59
SEC13-210ENST00000428626 RGS2P41220 211 aa18.73■□□□□ 0.59
SEC13-210ENST00000428626 MAP2K5Q13163 448 aa18.73■□□□□ 0.59
SEC13-210ENST00000428626 TSHZ3Q63HK5 1081 aa18.73■□□□□ 0.59
SEC13-210ENST00000428626 NECAB2Q7Z6G3 386 aa18.73■□□□□ 0.59
SEC13-210ENST00000428626 ANKLE1Q8NAG6 615 aa18.73■□□□□ 0.59
SEC13-210ENST00000428626 APBA2Q99767 749 aa18.73■□□□□ 0.59
SEC13-210ENST00000428626 NR2E3Q9Y5X4 410 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms