RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 SPA17Q15506 151 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 IQCA1Q86XH1 822 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 LY9Q9HBG7 655 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 TAB2Q9NYJ8 693 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 EPN1Q9Y6I3 576 aaPredicted RBP12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 H3BQF6 201 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 MAP2K7O14733 419 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 FANCBQ8NB91 859 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 MSANTD4Q8NCY6 345 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 TEX13AQ9BXU3 409 aaPredicted RBP12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 JADE2Q9NQC1 790 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 TRMT112Q9UI30 125 aaKnown RBP12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 L1RE1Q9UN81 338 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 SAR1BQ9Y6B6 198 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 MRC1P22897 1456 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 NEDD4P46934 1319 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 NBPF26B4DH59 902 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 PCCAP05165 728 aaPredicted RBP12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 NBPF14Q5TI25 921 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 CCDC181Q5TID7 509 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 NBPF10Q6P3W6 841 aaKnown RBP12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 NBPF15Q8N660 670 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 OR8K1Q8NGG5 319 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 MAP3K15Q6ZN16 1313 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 KDM3BQ7LBC6 1761 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 TRIM66O15016 1216 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 FAM76AQ8TAV0 307 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 IGDCC4Q8TDY8 1250 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 CAPZA3Q96KX2 299 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 AATFQ9NY61 560 aaKnown RBP eCLIP12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 RTL9Q8NET4 1388 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 EBAG9O00559 213 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 MCAMP43121 646 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 VSNL1P62760 191 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 ZNF174Q15697 407 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 ZNF654Q8IZM8 581 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 ADD3Q9UEY8 706 aaKnown RBP12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 H0YHG0 523 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 USO1O60763 962 aaKnown RBP12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 BMP6P22004 513 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 WWC2Q6AWC2 1192 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 ARMT1Q9H993 441 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 RAB21Q9UL25 225 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 TRIM21P19474 475 aaKnown RBP12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 MAGEA9P43362 315 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 NLRP5P59047 1200 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 STAMQ92783 540 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 RANBP6O60518 1105 aaKnown RBP12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 USP5P45974 858 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 COPB1P53618 953 aaKnown RBP12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 NT5DC1Q5TFE4 455 aa12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 CMTR1Q8N1G2 835 aaKnown RBP12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 CRACR2BQ8N4Y2 399 aaPredicted RBP12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 SYMPKQ92797 1274 aaKnown RBP12.13□□□□□ -0.47
ATP2C1-204ENST00000428331 RNF40O75150 1001 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 KIAA0754O94854 1291 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 SMYD4Q8IYR2 804 aaPredicted RBP12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 PAGE5Q96GU1 130 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 TRIM47Q96LD4 638 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 STRBPQ96SI9 672 aaKnown RBP12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 A0A0G2JS52 829 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 SARSP49591 514 aaKnown RBP12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 ALX1Q15699 326 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 ZBTB38Q8NAP3 1195 aaPredicted RBP12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 UBXN6Q9BZV1 441 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 ANKZF1Q9H8Y5 726 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 RGPD8O14715 1765 aaPredicted RBP12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 PSMA7O14818 248 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 IRX3P78415 501 aaPredicted RBP12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 MDM2Q00987 491 aaPredicted RBP12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 KIF5AQ12840 1032 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 NTRK3Q16288 839 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 TTC38Q5R3I4 469 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 MICALL1Q8N3F8 863 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 EPSTI1Q96J88 318 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 PNKPQ96T60 521 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 TMOD3Q9NYL9 352 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 VPS54Q9P1Q0 977 aa12.12□□□□□ -0.47
ATP2C1-204ENST00000428331 KCNJ18B7U540 433 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 KCNJ12Q14500 433 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 NELFBQ8WX92 580 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 SENP2Q9HC62 589 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 PRDM11Q9NQV5 511 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 ACTN4O43707 911 aaKnown RBP12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 PPFIA4O75335 1185 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 NAP1L1P55209 391 aaKnown RBP12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 GRIN1Q05586 938 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 IFIT1BQ5T764 474 aaKnown RBP12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 MSL3Q8N5Y2 521 aaKnown RBP12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 RNF26Q9BY78 433 aaPredicted RBP12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 PIH1D3Q9NQM4 214 aaKnown RBP12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 ABHD10Q9NUJ1 306 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 DENND2AQ9ULE3 1009 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 PCDH11XQ9BZA7 1347 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 PCDH11YQ9BZA8 1340 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 ERVV-2B6SEH9 535 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 OPA1O60313 960 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 STAT6P42226 847 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 PAFAH1B1P43034 410 aa12.11□□□□□ -0.47
ATP2C1-204ENST00000428331 KRT31Q15323 416 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms