RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 DAGLAQ9Y4D2 1042 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 H0YIN7 160 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 AP5Z1O43299 807 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 VEGFAP15692 232 aaPredicted RBP12□□□□□ -0.49
HDAC9-210ENST00000428307 PLCG2P16885 1265 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 XBP1P17861 261 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 PNMA1Q8ND90 353 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 FOXP1Q9H334 677 aaPredicted RBP12□□□□□ -0.49
HDAC9-210ENST00000428307 CTAGE5O15320 804 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 ZNF202O95125 648 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 PTMAP06454 111 aaKnown RBP12□□□□□ -0.49
HDAC9-210ENST00000428307 PFKFB1P16118 471 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 CDK8P49336 464 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 ZNF165P49910 485 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 SLC15A2Q16348 729 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 DGKHQ86XP1 1220 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 CBX8Q9HC52 389 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 GAKO14976 1311 aa12□□□□□ -0.49
HDAC9-210ENST00000428307 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
HDAC9-210ENST00000428307 RASA1P20936 1047 aa11.99□□□□□ -0.49
HDAC9-210ENST00000428307 CMA1P23946 247 aa11.99□□□□□ -0.49
HDAC9-210ENST00000428307 SPECC1Q5M775 1068 aa11.99□□□□□ -0.49
HDAC9-210ENST00000428307 CERS3Q8IU89 383 aa11.99□□□□□ -0.49
HDAC9-210ENST00000428307 STAG2Q8N3U4 1231 aa11.99□□□□□ -0.49
HDAC9-210ENST00000428307 JMYQ8N9B5 988 aa11.99□□□□□ -0.49
HDAC9-210ENST00000428307 PCDHB6Q9Y5E3 794 aa11.99□□□□□ -0.49
HDAC9-210ENST00000428307 PPP6R2O75170 966 aa11.99□□□□□ -0.49
HDAC9-210ENST00000428307 SHC4Q6S5L8 630 aa11.99□□□□□ -0.49
HDAC9-210ENST00000428307 EYA3Q99504 573 aa11.99□□□□□ -0.49
HDAC9-210ENST00000428307 PDGFDQ9GZP0 370 aaPredicted RBP11.99□□□□□ -0.49
HDAC9-210ENST00000428307 CCDC88AQ3V6T2 1871 aa11.98□□□□□ -0.49
HDAC9-210ENST00000428307 KIF5BP33176 963 aa11.98□□□□□ -0.49
HDAC9-210ENST00000428307 RILPL1Q5EBL4 403 aa11.98□□□□□ -0.49
HDAC9-210ENST00000428307 EARS2Q5JPH6 523 aaKnown RBP11.98□□□□□ -0.49
HDAC9-210ENST00000428307 ZSCAN30Q86W11 494 aa11.98□□□□□ -0.49
HDAC9-210ENST00000428307 PHF20Q9BVI0 1012 aa11.98□□□□□ -0.49
HDAC9-210ENST00000428307 ZNF287Q9HBT7 754 aa11.98□□□□□ -0.49
HDAC9-210ENST00000428307 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.98□□□□□ -0.49
HDAC9-210ENST00000428307 CNTNAP5Q8WYK1 1306 aa11.98□□□□□ -0.49
HDAC9-210ENST00000428307 C11orf57Q6ZUT1 292 aaPredicted RBP11.98□□□□□ -0.49
HDAC9-210ENST00000428307 C16orf86Q6ZW13 317 aa11.98□□□□□ -0.49
HDAC9-210ENST00000428307 CAMKK2Q96RR4 588 aa11.98□□□□□ -0.49
HDAC9-210ENST00000428307 TMEM47Q9BQJ4 181 aa11.98□□□□□ -0.49
HDAC9-210ENST00000428307 ROBO3Q96MS0 1386 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 GOLGA8HP0CJ92 632 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 SCG2P13521 617 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 KRT2P35908 639 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 SYKP43405 635 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 GRIN1Q05586 938 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 NOM1Q5C9Z4 860 aaKnown RBP11.97□□□□□ -0.49
HDAC9-210ENST00000428307 RASGRP2Q7LDG7 609 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 DDX4Q9NQI0 724 aaKnown RBP11.97□□□□□ -0.49
HDAC9-210ENST00000428307 USP40Q9NVE5 1235 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 STK32BQ9NY57 414 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 BAZ2BQ9UIF8 2168 aaKnown RBP11.97□□□□□ -0.49
HDAC9-210ENST00000428307 BIN1O00499 593 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 MSNP26038 577 aaKnown RBP11.97□□□□□ -0.49
HDAC9-210ENST00000428307 NLRP5P59047 1200 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 HS1BP3Q53T59 392 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 KIAA0825Q8IV33 1275 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 KRI1Q8N9T8 703 aaKnown RBP11.97□□□□□ -0.49
HDAC9-210ENST00000428307 CCDC39Q9UFE4 941 aa11.97□□□□□ -0.49
HDAC9-210ENST00000428307 ANKRD31Q8N7Z5 1873 aa11.96□□□□□ -0.49
HDAC9-210ENST00000428307 STX1AQ16623 288 aa11.96□□□□□ -0.49
HDAC9-210ENST00000428307 PODNQ7Z5L7 613 aa11.96□□□□□ -0.49
HDAC9-210ENST00000428307 ANKS1AQ92625 1134 aa11.96□□□□□ -0.49
HDAC9-210ENST00000428307 GPKOWQ92917 476 aaPredicted RBP eCLIP11.96□□□□□ -0.49
HDAC9-210ENST00000428307 CPVLQ9H3G5 476 aa11.96□□□□□ -0.49
HDAC9-210ENST00000428307 TCP11L1Q9NUJ3 509 aa11.96□□□□□ -0.49
HDAC9-210ENST00000428307 KIAA1468Q9P260 1216 aa11.96□□□□□ -0.49
HDAC9-210ENST00000428307 MAD2L2Q9UI95 211 aa11.96□□□□□ -0.49
HDAC9-210ENST00000428307 SUGT1Q9Y2Z0 365 aa11.96□□□□□ -0.49
HDAC9-210ENST00000428307 MAST2Q6P0Q8 1798 aa11.96□□□□□ -0.5
HDAC9-210ENST00000428307 CUTAO60888 179 aa11.96□□□□□ -0.5
HDAC9-210ENST00000428307 NPY5RQ15761 445 aa11.96□□□□□ -0.5
HDAC9-210ENST00000428307 PFKFB3Q16875 520 aaPredicted RBP11.96□□□□□ -0.5
HDAC9-210ENST00000428307 RESP18Q5W5W9 173 aa11.96□□□□□ -0.5
HDAC9-210ENST00000428307 ISM2Q6H9L7 571 aa11.96□□□□□ -0.5
HDAC9-210ENST00000428307 CEP95Q96GE4 821 aa11.96□□□□□ -0.5
HDAC9-210ENST00000428307 ZNF830Q96NB3 372 aaPredicted RBP11.96□□□□□ -0.5
HDAC9-210ENST00000428307 BRMS1Q9HCU9 246 aa11.96□□□□□ -0.5
HDAC9-210ENST00000428307 NOL7Q9UMY1 257 aaKnown RBP11.96□□□□□ -0.5
HDAC9-210ENST00000428307 PCDHAC2Q9Y5I4 1007 aa11.96□□□□□ -0.5
HDAC9-210ENST00000428307 KIAA1551Q9HCM1 1747 aa11.95□□□□□ -0.5
HDAC9-210ENST00000428307 WNT7AO00755 349 aa11.95□□□□□ -0.5
HDAC9-210ENST00000428307 ADAMTS3O15072 1205 aa11.95□□□□□ -0.5
HDAC9-210ENST00000428307 CLCN1P35523 988 aa11.95□□□□□ -0.5
HDAC9-210ENST00000428307 ZRSR1Q15695 479 aaKnown RBP11.95□□□□□ -0.5
HDAC9-210ENST00000428307 CCDC178Q5BJE1 867 aa11.95□□□□□ -0.5
HDAC9-210ENST00000428307 STYK1Q6J9G0 422 aa11.95□□□□□ -0.5
HDAC9-210ENST00000428307 APOBEC3HQ6NTF7 200 aaKnown RBP11.95□□□□□ -0.5
HDAC9-210ENST00000428307 SPC24Q8NBT2 197 aa11.95□□□□□ -0.5
HDAC9-210ENST00000428307 NEDD1Q8NHV4 660 aa11.95□□□□□ -0.5
HDAC9-210ENST00000428307 TEKT1Q969V4 418 aa11.95□□□□□ -0.5
HDAC9-210ENST00000428307 ANO10Q9NW15 660 aa11.95□□□□□ -0.5
HDAC9-210ENST00000428307 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.95□□□□□ -0.5
HDAC9-210ENST00000428307 KCNH3Q9ULD8 1083 aa11.95□□□□□ -0.5
HDAC9-210ENST00000428307 HPSEQ9Y251 543 aa11.95□□□□□ -0.5
HDAC9-210ENST00000428307 MYH15Q9Y2K3 1946 aa11.95□□□□□ -0.5
HDAC9-210ENST00000428307 TRIM75PA6NK02 468 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms