RNA–Protein interactions for RNA: ENST00000428214.5

PEX1-203, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 1 (best) BASIC

Gene PEX1, Length 3,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-203ENST00000428214 SSRP1Q08945 709 aaKnown RBP12.97□□□□□ -0.33
PEX1-203ENST00000428214 USP17L2Q6R6M4 530 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 SYNE3Q6ZMZ3 975 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 SLC16A10Q8TF71 515 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 ZDHHC15Q96MV8 337 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 ASTN2O75129 1339 aaPredicted RBP12.97□□□□□ -0.33
PEX1-203ENST00000428214 NR1I2O75469 434 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 SHMT1P34896 483 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 GABPAQ06546 454 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 SKOR2Q2VWA4 1001 aaPredicted RBP12.97□□□□□ -0.33
PEX1-203ENST00000428214 TYW1BQ6NUM6 668 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 CATIPQ7Z7H3 387 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 ZNF444Q8N0Y2 327 aaPredicted RBP12.97□□□□□ -0.33
PEX1-203ENST00000428214 PIM2Q9P1W9 311 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 CNTNAP5Q8WYK1 1306 aa12.96□□□□□ -0.33
PEX1-203ENST00000428214 TCP10L2B9ZVM9 353 aa12.96□□□□□ -0.34
PEX1-203ENST00000428214 UBE2HP62256 183 aa12.96□□□□□ -0.34
PEX1-203ENST00000428214 RNF214Q8ND24 703 aa12.96□□□□□ -0.34
PEX1-203ENST00000428214 RBSNQ9H1K0 784 aa12.96□□□□□ -0.34
PEX1-203ENST00000428214 FRMPD2Q68DX3 1309 aaPredicted RBP12.96□□□□□ -0.34
PEX1-203ENST00000428214 ATP2B1P20020 1258 aa12.95□□□□□ -0.34
PEX1-203ENST00000428214 MARCKSP29966 332 aaPredicted RBP12.95□□□□□ -0.34
PEX1-203ENST00000428214 HHIPL2Q6UWX4 724 aa12.95□□□□□ -0.34
PEX1-203ENST00000428214 TMTC3Q6ZXV5 915 aa12.95□□□□□ -0.34
PEX1-203ENST00000428214 MAD2L2Q9UI95 211 aa12.95□□□□□ -0.34
PEX1-203ENST00000428214 ATP6V1DQ9Y5K8 247 aa12.95□□□□□ -0.34
PEX1-203ENST00000428214 NID2Q14112 1375 aa12.95□□□□□ -0.34
PEX1-203ENST00000428214 GDF11O95390 407 aa12.95□□□□□ -0.34
PEX1-203ENST00000428214 CXCL9Q07325 125 aa12.95□□□□□ -0.34
PEX1-203ENST00000428214 ZSCAN29Q8IWY8 852 aaPredicted RBP12.95□□□□□ -0.34
PEX1-203ENST00000428214 SLC3A2P08195 630 aaKnown RBP12.95□□□□□ -0.34
PEX1-203ENST00000428214 GRIN1Q05586 938 aa12.95□□□□□ -0.34
PEX1-203ENST00000428214 NPY5RQ15761 445 aa12.95□□□□□ -0.34
PEX1-203ENST00000428214 MYSM1Q5VVJ2 828 aa12.95□□□□□ -0.34
PEX1-203ENST00000428214 FER1L6Q2WGJ9 1857 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 GOLGA6L3A6NEY3 463 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 TOB1P50616 345 aaPredicted RBP12.94□□□□□ -0.34
PEX1-203ENST00000428214 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 DALRD3Q5D0E6 543 aaKnown RBP12.94□□□□□ -0.34
PEX1-203ENST00000428214 UBA5Q9GZZ9 404 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 KAT14Q9H8E8 782 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 USP17L5A8MUK1 530 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 DIS3L2Q8IYB7 885 aaKnown RBP12.94□□□□□ -0.34
PEX1-203ENST00000428214 DACT1Q9NYF0 836 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 SERPINB13Q9UIV8 391 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 PSME4Q14997 1843 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 MPHOSPH10O00566 681 aaKnown RBP12.94□□□□□ -0.34
PEX1-203ENST00000428214 PLCG2P16885 1265 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 ATP2B2Q01814 1243 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 SPECC1Q5M775 1068 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 SLF2Q8IX21 1173 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 RASGRP4Q8TDF6 673 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 GMLQ99445 158 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 PSMD1Q99460 953 aa12.94□□□□□ -0.34
PEX1-203ENST00000428214 TAL1P17542 331 aaPredicted RBP12.93□□□□□ -0.34
PEX1-203ENST00000428214 POLD1P28340 1107 aa12.93□□□□□ -0.34
PEX1-203ENST00000428214 RBM26Q5T8P6 1007 aaKnown RBP12.93□□□□□ -0.34
PEX1-203ENST00000428214 RSBN1LQ6PCB5 846 aaPredicted RBP12.93□□□□□ -0.34
PEX1-203ENST00000428214 CKAP2LQ8IYA6 745 aa12.93□□□□□ -0.34
PEX1-203ENST00000428214 ZSCAN16Q9H4T2 348 aaPredicted RBP12.93□□□□□ -0.34
PEX1-203ENST00000428214 CCDC84Q86UT8 332 aaPredicted RBP12.93□□□□□ -0.34
PEX1-203ENST00000428214 RTKN2Q8IZC4 609 aa12.93□□□□□ -0.34
PEX1-203ENST00000428214 TMTC2Q8N394 836 aa12.93□□□□□ -0.34
PEX1-203ENST00000428214 CLIC6Q96NY7 704 aa12.93□□□□□ -0.34
PEX1-203ENST00000428214 VAT1LQ9HCJ6 419 aa12.93□□□□□ -0.34
PEX1-203ENST00000428214 SUGT1Q9Y2Z0 365 aa12.93□□□□□ -0.34
PEX1-203ENST00000428214 MMP1P03956 469 aa12.93□□□□□ -0.34
PEX1-203ENST00000428214 GRPEL1Q9HAV7 217 aa12.93□□□□□ -0.34
PEX1-203ENST00000428214 PCDHA7Q9UN72 937 aa12.93□□□□□ -0.34
PEX1-203ENST00000428214 FZD1Q9UP38 647 aa12.93□□□□□ -0.34
PEX1-203ENST00000428214 BRCA2P51587 3418 aa12.93□□□□□ -0.34
PEX1-203ENST00000428214 RAD21O60216 631 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 CDKL5O76039 1030 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 SF3A1Q15459 793 aaKnown RBP12.92□□□□□ -0.34
PEX1-203ENST00000428214 AMOTL1Q8IY63 956 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 TMEM39BQ9GZU3 492 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 A0A1B0GVL5 298 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 VIL1P09327 827 aaKnown RBP12.92□□□□□ -0.34
PEX1-203ENST00000428214 HOMER1Q86YM7 354 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 LINC00301Q8NCQ3 95 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 NEDD1Q8NHV4 660 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 CLIP2Q9UDT6 1046 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 PCP11498 1178 aaKnown RBP12.92□□□□□ -0.34
PEX1-203ENST00000428214 ME1P48163 572 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 TTBK2Q6IQ55 1244 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 CCDC125Q86Z20 511 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 CTCFLQ8NI51 663 aaPredicted RBP12.92□□□□□ -0.34
PEX1-203ENST00000428214 BICD2Q8TD16 824 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 VEZTQ9HBM0 779 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 PCDHB6Q9Y5E3 794 aa12.92□□□□□ -0.34
PEX1-203ENST00000428214 SPDYE2BA6NHP3 402 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 MBD3O95983 291 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 SPDYE6P0CI01 402 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 CPLX2Q6PUV4 134 aaKnown RBP12.91□□□□□ -0.34
PEX1-203ENST00000428214 DLK2Q6UY11 383 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 MIGA2Q7L4E1 593 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 TRIM22Q8IYM9 498 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 TAOK3Q9H2K8 898 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 SERPINA10Q9UK55 444 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 MYH4Q9Y623 1939 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms