RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 SIAH1Q8IUQ4 282 aa19.96■□□□□ 0.79
VRK2-204ENST00000428021 CCDC17Q96LX7 622 aa19.96■□□□□ 0.79
VRK2-204ENST00000428021 ARHGAP39Q9C0H5 1083 aa19.96■□□□□ 0.79
VRK2-204ENST00000428021 KIAA1683Q9H0B3 1180 aa19.96■□□□□ 0.79
VRK2-204ENST00000428021 TMOD4Q9NZQ9 345 aa19.96■□□□□ 0.79
VRK2-204ENST00000428021 CAPN15O75808 1086 aa19.95■□□□□ 0.78
VRK2-204ENST00000428021 SDSP20132 328 aa19.95■□□□□ 0.78
VRK2-204ENST00000428021 CTGFP29279 349 aa19.95■□□□□ 0.78
VRK2-204ENST00000428021 HOXA7P31268 230 aaPredicted RBP19.95■□□□□ 0.78
VRK2-204ENST00000428021 MCMDC2Q4G0Z9 681 aa19.95■□□□□ 0.78
VRK2-204ENST00000428021 C12orf42Q96LP6 360 aa19.95■□□□□ 0.78
VRK2-204ENST00000428021 NACAP1Q9BZK3 213 aa19.95■□□□□ 0.78
VRK2-204ENST00000428021 ASCC2Q9H1I8 757 aaPredicted RBP19.95■□□□□ 0.78
VRK2-204ENST00000428021 EFCC1Q9HA90 598 aa19.95■□□□□ 0.78
VRK2-204ENST00000428021 A0A1W2PRG0 241 aa19.94■□□□□ 0.78
VRK2-204ENST00000428021 RASA1P20936 1047 aa19.94■□□□□ 0.78
VRK2-204ENST00000428021 FBXO46Q6PJ61 603 aaPredicted RBP19.94■□□□□ 0.78
VRK2-204ENST00000428021 ZNF589Q86UQ0 364 aaPredicted RBP19.94■□□□□ 0.78
VRK2-204ENST00000428021 CLEC10AQ8IUN9 316 aa19.94■□□□□ 0.78
VRK2-204ENST00000428021 STK11IPQ8N1F8 1099 aa19.94■□□□□ 0.78
VRK2-204ENST00000428021 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.94■□□□□ 0.78
VRK2-204ENST00000428021 PNMA3Q9UL41 463 aa19.94■□□□□ 0.78
VRK2-204ENST00000428021 GSPT1P15170 499 aaKnown RBP19.93■□□□□ 0.78
VRK2-204ENST00000428021 OSBPP22059 807 aa19.93■□□□□ 0.78
VRK2-204ENST00000428021 PABPC4Q13310 644 aaKnown RBP eCLIP19.93■□□□□ 0.78
VRK2-204ENST00000428021 ZYXQ15942 572 aaKnown RBP19.93■□□□□ 0.78
VRK2-204ENST00000428021 TTC22Q5TAA0 569 aa19.93■□□□□ 0.78
VRK2-204ENST00000428021 SMCR8Q8TEV9 937 aaPredicted RBP19.93■□□□□ 0.78
VRK2-204ENST00000428021 FEZ1Q99689 392 aa19.93■□□□□ 0.78
VRK2-204ENST00000428021 NAPBQ9H115 298 aa19.93■□□□□ 0.78
VRK2-204ENST00000428021 HPS5Q9UPZ3 1129 aa19.93■□□□□ 0.78
VRK2-204ENST00000428021 GREB1LQ9C091 1923 aaPredicted RBP19.93■□□□□ 0.78
VRK2-204ENST00000428021 USP14P54578 494 aa19.92■□□□□ 0.78
VRK2-204ENST00000428021 ALX1Q15699 326 aa19.92■□□□□ 0.78
VRK2-204ENST00000428021 P2RX7Q99572 595 aaKnown RBP19.92■□□□□ 0.78
VRK2-204ENST00000428021 PTPN22Q9Y2R2 807 aa19.92■□□□□ 0.78
VRK2-204ENST00000428021 PSMC4P43686 418 aa19.91■□□□□ 0.78
VRK2-204ENST00000428021 PPARAQ07869 468 aa19.91■□□□□ 0.78
VRK2-204ENST00000428021 KIF22Q14807 665 aa19.91■□□□□ 0.78
VRK2-204ENST00000428021 ARHGEF6Q15052 776 aa19.91■□□□□ 0.78
VRK2-204ENST00000428021 TRIM47Q96LD4 638 aa19.91■□□□□ 0.78
VRK2-204ENST00000428021 MKNK2Q9HBH9 465 aa19.91■□□□□ 0.78
VRK2-204ENST00000428021 MGAMO43451 1857 aa19.9■□□□□ 0.78
VRK2-204ENST00000428021 CCDC85CA6NKD9 419 aa19.9■□□□□ 0.78
VRK2-204ENST00000428021 ECM2O94769 699 aaPredicted RBP19.9■□□□□ 0.78
VRK2-204ENST00000428021 HSPD1P10809 573 aaKnown RBP19.9■□□□□ 0.78
VRK2-204ENST00000428021 VCAM1P19320 739 aa19.9■□□□□ 0.78
VRK2-204ENST00000428021 GCLCP48506 637 aaPredicted RBP19.9■□□□□ 0.78
VRK2-204ENST00000428021 IRX3P78415 501 aaPredicted RBP19.9■□□□□ 0.78
VRK2-204ENST00000428021 ICA1Q05084 483 aa19.9■□□□□ 0.78
VRK2-204ENST00000428021 KIAA1755Q5JYT7 1200 aa19.9■□□□□ 0.78
VRK2-204ENST00000428021 POTEEQ6S8J3 1075 aa19.9■□□□□ 0.78
VRK2-204ENST00000428021 ANKRD13CQ8N6S4 541 aa19.9■□□□□ 0.78
VRK2-204ENST00000428021 TMX2Q9Y320 296 aa19.9■□□□□ 0.78
VRK2-204ENST00000428021 CCDC171Q6TFL3 1326 aa19.9■□□□□ 0.78
VRK2-204ENST00000428021 PRDM1O75626 825 aa19.89■□□□□ 0.77
VRK2-204ENST00000428021 FGAP02671 866 aa19.89■□□□□ 0.77
VRK2-204ENST00000428021 CWC27Q6UX04 472 aaKnown RBP19.89■□□□□ 0.77
VRK2-204ENST00000428021 KANSL2Q9H9L4 492 aa19.89■□□□□ 0.77
VRK2-204ENST00000428021 TACC3Q9Y6A5 838 aa19.89■□□□□ 0.77
VRK2-204ENST00000428021 CENPFP49454 3210 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 USP17L15C9J2P7 530 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 USP17L13C9JLJ4 530 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 USP17L11C9JVI0 530 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 USP17L18D6R9N7 530 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 USP17L22D6RA61 530 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 USP17L17D6RBQ6 530 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 USP17L19D6RCP7 530 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 USP17L20D6RJB6 530 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 GNRH1P01148 92 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 EEF2P13639 858 aaKnown RBP19.88■□□□□ 0.77
VRK2-204ENST00000428021 HERVK_113P62684 666 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 CTDSPL2Q05D32 466 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 USP17L24Q0WX57 530 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 FAM110CQ1W6H9 321 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 CATSPERGQ6ZRH7 1159 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 ARHGEF10LQ9HCE6 1279 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 DIAPH3Q9NSV4 1193 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 ANAPC4Q9UJX5 808 aa19.88■□□□□ 0.77
VRK2-204ENST00000428021 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.88■□□□□ 0.77
VRK2-204ENST00000428021 IGKV6D-41A0A0C4DH26 115 aa19.87■□□□□ 0.77
VRK2-204ENST00000428021 HIP1O00291 1037 aa19.87■□□□□ 0.77
VRK2-204ENST00000428021 PEX10O60683 326 aa19.87■□□□□ 0.77
VRK2-204ENST00000428021 FMNL1O95466 1100 aaPredicted RBP19.87■□□□□ 0.77
VRK2-204ENST00000428021 CENPQQ7L2Z9 268 aaPredicted RBP19.87■□□□□ 0.77
VRK2-204ENST00000428021 ZNF444Q8N0Y2 327 aaPredicted RBP19.87■□□□□ 0.77
VRK2-204ENST00000428021 RPAP3Q9H6T3 665 aaPredicted RBP19.87■□□□□ 0.77
VRK2-204ENST00000428021 ZNF287Q9HBT7 754 aa19.87■□□□□ 0.77
VRK2-204ENST00000428021 TXNRD2Q9NNW7 524 aa19.87■□□□□ 0.77
VRK2-204ENST00000428021 INCENPQ9NQS7 918 aa19.87■□□□□ 0.77
VRK2-204ENST00000428021 RBPJLQ9UBG7 517 aa19.87■□□□□ 0.77
VRK2-204ENST00000428021 MORF4L1Q9UBU8 362 aa19.87■□□□□ 0.77
VRK2-204ENST00000428021 PTCH2Q9Y6C5 1203 aa19.87■□□□□ 0.77
VRK2-204ENST00000428021 ZMYM6O95789 1325 aa19.86■□□□□ 0.77
VRK2-204ENST00000428021 SLC3A2P08195 630 aaKnown RBP19.86■□□□□ 0.77
VRK2-204ENST00000428021 PDE4BQ07343 736 aa19.86■□□□□ 0.77
VRK2-204ENST00000428021 IL25Q9H293 177 aa19.86■□□□□ 0.77
VRK2-204ENST00000428021 VCPKMTQ9H867 229 aa19.86■□□□□ 0.77
VRK2-204ENST00000428021 SRRDQ9UH36 339 aa19.86■□□□□ 0.77
VRK2-204ENST00000428021 DOCK3Q8IZD9 2030 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms