RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 HAUS8Q9BT25 410 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 BCAP29Q9UHQ4 241 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 PA2G4Q9UQ80 394 aaKnown RBP12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 SEC24BO95487 1268 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 GNAQP50148 359 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 PPFIA1Q13136 1202 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 TAF11Q15544 211 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 SLC9C1Q4G0N8 1177 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 CSGALNACT2Q8N6G5 542 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 BAG5Q9UL15 447 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 FAN1Q9Y2M0 1017 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 TYW1BQ6NUM6 668 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 CYTH2Q99418 400 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 ANO3Q9BYT9 981 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 GPCPD1Q9NPB8 672 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 MCM9Q9NXL9 1143 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 NOD1Q9Y239 953 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 SNRPA1P09661 255 aaKnown RBP12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 KMT5BQ4FZB7 885 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 HAUS1Q96CS2 278 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 CAPS2Q9BXY5 557 aa12.55□□□□□ -0.4
POLR2J4-202ENST00000427076 CEBPAP49715 358 aaPredicted RBP12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 ARHGAP44Q17R89 818 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 MAP3K21Q5TCX8 1036 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 TFCP2L1Q9NZI6 479 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 RTL9Q8NET4 1388 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 IRX4P78413 519 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 VWA3BQ502W6 1294 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 PEX26Q7Z412 305 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 DPH5Q9H2P9 285 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 YY1AP1Q9H869 796 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 CAMSAP2Q08AD1 1489 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 PIK3R4Q99570 1358 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 CALUO43852 315 aaPredicted RBP12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 LONP1P36776 959 aaKnown RBP12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 GOLGA8FQ08AF8 430 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 GOLGA8DPQ0D2H9 430 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 SLC12A1Q13621 1099 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 DYMQ7RTS9 669 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 NELFCDQ8IXH7 590 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 SMYD2Q9NRG4 433 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 SFMBT1Q9UHJ3 866 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 PSMC1P62191 440 aaKnown RBP12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 FCHSD1Q86WN1 690 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 GABPB2Q8TAK5 448 aaPredicted RBP12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 MEIS3Q99687 375 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 CALML3P27482 149 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 IFNAR2P48551 515 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 EIF6P56537 245 aaKnown RBP12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 ITKQ08881 620 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 MTMR3Q13615 1198 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 RAB3GAP1Q15042 981 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 RPS6KA1Q15418 735 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 PIK3AP1Q6ZUJ8 805 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 NSMCE1Q8WV22 266 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 RSAD2Q8WXG1 361 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 TSC22D3Q99576 134 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 CHPF2Q9P2E5 772 aa12.54□□□□□ -0.4
POLR2J4-202ENST00000427076 PDE1AP54750 535 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 SLC9A5Q14940 896 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 CFAP221Q4G0U5 840 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 HDAC11Q96DB2 347 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 NAP1L4Q99733 375 aaKnown RBP12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 KRT82Q9NSB4 513 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 PALM3A6NDB9 673 aaPredicted RBP12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 PPFIA4O75335 1185 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 IFNB1P01574 187 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 SPOUT1Q5T280 376 aaKnown RBP12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 ARMCX6Q7L4S7 300 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 SKA2Q8WVK7 121 aaPredicted RBP12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 ANKRD35Q8N283 1001 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 JDP2Q8WYK2 163 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 SPATA17Q96L03 361 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 PAG1Q9NWQ8 432 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 GNGT2O14610 69 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 CWF19L2Q2TBE0 894 aaKnown RBP12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 CCDC92Q53HC0 331 aaPredicted RBP12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 C16orf87Q6PH81 154 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 CACTINQ8WUQ7 758 aaKnown RBP12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 NLRP3Q96P20 1036 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 DESI2Q9BSY9 194 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 POLR2DO15514 142 aaKnown RBP12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 GADD45BO75293 160 aaPredicted RBP12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 CD19P15391 556 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 MAGEA1P43355 309 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 ADKP55263 362 aaKnown RBP12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 DAB2P98082 770 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 TRAF1Q13077 416 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 CREB3L3Q68CJ9 461 aa12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 TRIM56Q9BRZ2 755 aaKnown RBP12.53□□□□□ -0.4
POLR2J4-202ENST00000427076 COBLO75128 1261 aa12.52□□□□□ -0.4
POLR2J4-202ENST00000427076 GFAPP14136 432 aa12.52□□□□□ -0.4
POLR2J4-202ENST00000427076 TXKP42681 527 aa12.52□□□□□ -0.4
POLR2J4-202ENST00000427076 MAP3K7CLP57077 242 aa12.52□□□□□ -0.4
POLR2J4-202ENST00000427076 NCAPH2Q6IBW4 605 aa12.52□□□□□ -0.4
POLR2J4-202ENST00000427076 NYXQ9GZU5 481 aa12.52□□□□□ -0.4
POLR2J4-202ENST00000427076 FIS1Q9Y3D6 152 aa12.52□□□□□ -0.4
POLR2J4-202ENST00000427076 EEF1DP29692 281 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms